Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 8.5e-161 570.5 329 100.0
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 6.8e-158 560.8 329 98.5
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 2.0e-157 559.3 329 98.2
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 4.4e-149 531.6 329 83.9
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 6.1e-143 511.1 325 75.1
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 3.2e-139 498.8 326 87.7
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 1.2e-138 496.9 326 88.3
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 3.5e-138 495.4 326 87.4
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 4.6e-138 495.0 329 86.6
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 4.6e-138 495.0 329 86.9
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 2.3e-137 492.7 329 86.6
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 3.0e-137 492.3 326 87.1
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 3.3e-136 488.8 326 84.7
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 3.3e-136 488.8 327 72.8
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 5.6e-136 488.0 330 72.1
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 2.1e-135 486.1 326 85.3
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 3.6e-135 485.3 326 85.9
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 6.2e-135 484.6 326 84.0
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 1.4e-134 483.4 328 85.1
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 1.4e-134 483.4 326 85.6
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 2.3e-134 482.6 329 85.1
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 6.8e-134 481.1 326 72.4
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 6.8e-134 481.1 329 85.1
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 8.9e-134 480.7 324 71.3
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 8.9e-134 480.7 326 74.2
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 1.5e-133 479.9 329 84.8
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 2.0e-133 479.6 326 84.7
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 2.0e-133 479.6 322 71.4
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 2.6e-133 479.2 329 70.5
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 2.6e-133 479.2 324 70.7
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 3.4e-133 478.8 324 83.0
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 4.4e-133 478.4 324 71.3
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 4.4e-133 478.4 326 81.9
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 1.7e-132 476.5 326 72.1
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 2.9e-132 475.7 326 85.0
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 4.9e-132 474.9 326 77.6
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 1.4e-131 473.4 328 80.5
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 1.4e-131 473.4 329 83.6
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 1.4e-131 473.4 324 69.8
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 1.9e-131 473.0 328 83.5
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 2.4e-131 472.6 326 84.7
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 2.4e-131 472.6 325 71.4
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 3.2e-131 472.2 326 69.6
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 4.1e-131 471.9 321 85.4
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 4.1e-131 471.9 326 84.4
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 7.0e-131 471.1 326 83.1
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 1.6e-130 469.9 329 71.4
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 3.5e-130 468.8 326 83.7
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 3.5e-130 468.8 324 69.8
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 4.6e-130 468.4 328 83.5
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 1.0e-129 467.2 328 67.7
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 1.0e-129 467.2 328 82.6
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 1.7e-129 466.5 324 83.3
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 3.9e-129 465.3 325 68.9
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 5.0e-129 464.9 328 80.8
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 6.6e-129 464.5 324 84.3
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 3.3e-128 462.2 327 67.0
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 5.6e-128 461.5 329 74.5
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 7.3e-128 461.1 326 83.1
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 9.5e-128 460.7 329 83.9
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 1.6e-127 459.9 326 80.7
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 2.1e-127 459.5 329 80.2
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 2.8e-127 459.1 327 67.6
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 3.6e-127 458.8 324 68.2
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 4.7e-127 458.4 324 82.1
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 4.7e-127 458.4 329 79.9
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 8.1e-127 457.6 329 79.9
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 8.1e-127 457.6 326 83.4
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 1.4e-126 456.8 238 88.7
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.8e-126 456.4 329 79.9
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 1.3e-124 450.3 237 88.6
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 3.7e-124 448.7 327 64.8
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 1.4e-123 446.8 371 70.4
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 1.4e-123 446.8 328 65.9
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 1.9e-123 446.4 238 84.9
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 2.3e-121 439.5 329 77.5
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 3.0e-121 439.1 321 73.5
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 3.0e-121 439.1 320 79.4
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 5.1e-121 438.3 238 83.2
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 9.5e-120 434.1 324 68.5
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 1.6e-119 433.3 324 78.1
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 4.7e-119 431.8 324 63.6
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 6.2e-119 431.4 327 76.8
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 3.1e-118 429.1 324 63.6
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 6.8e-118 427.9 324 63.0
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 6.8e-118 427.9 324 63.0
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 8.9e-118 427.6 324 63.0
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 1.2e-117 427.2 329 77.5
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 4.1e-115 418.7 335 63.9
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 1.2e-114 417.2 324 62.0
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 4.6e-114 415.2 320 77.8
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 2.5e-112 409.5 324 61.7
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 2.8e-111 406.0 263 76.4
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 1.3e-108 397.1 307 76.2
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 8.4e-108 394.4 235 75.3
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 4.6e-106 388.7 319 58.9
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 6.0e-106 388.3 326 73.9
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 3.3e-104 382.5 325 56.0
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 9.3e-99 364.4 249 73.5
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 6.0e-98 361.7 323 69.7
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 3.3e-96 355.9 261 84.7
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 9.6e-96 354.4 329 66.6
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 7.6e-93 344.7 279 80.3
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 2.9e-92 342.8 267 79.8
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 2.2e-84 316.6 252 80.6
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 5.0e-76 288.9 249 75.9
Cre01.g050050 Chlamydomonas reinhardtii HOM05D006600 ORTHO05D008446 5.3e-70 268.9 374 39.3
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 4.5e-69 265.8 247 72.1
MCO09G534 Micromonas commoda HOM05D006600 ORTHO05D008446 2.7e-66 256.5 329 47.7
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 9.7e-64 248.1 191 64.9
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 2.2e-63 246.9 226 54.9
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 7.7e-61 238.4 138 79.7
CBR_g40512 Chara braunii HOM05D000409 ORTHO05D000184 6.5e-60 235.3 189 57.1
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 2.6e-53 213.4 126 77.8
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 5.5e-51 205.7 124 72.6
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 1.8e-41 174.1 94 81.9
MBI16_g35586_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D001493 3.6e-18 96.7 83 54.2
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 1.8e-17 94.4 87 58.6
GSVIVG01038121001 Vitis vinifera HOM05D006600 ORTHO05D008446 1.5e-08 64.7 46 69.6
CBR_g40511 Chara braunii HOM05D000019 ORTHO05D000002 4.4e-08 63.2 156 30.8
Actinidia08259 Actinidia chinensis HOM05D006600 ORTHO05D008446 5.8e-08 62.8 37 78.4
Dinv39240 Davidia involucrata HOM05D006600 ORTHO05D008446 1.3e-07 61.6 55 60.0


User provided reference genes

Program Settings