Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.009G141500 Gossypium raimondii HOM05D007812 ORTHO05D009912 5.1e-26 120.9 63 100.0
Gohir.D05G137100 Gossypium hirsutum HOM05D007812 ORTHO05D009912 6.6e-26 120.6 63 98.4
Manes.11G025800 Manihot esculenta HOM05D007812 ORTHO05D009912 3.0e-10 68.6 61 63.9
Gohir.A05G135100 Gossypium hirsutum HOM05D007812 ORTHO05D009912 6.6e-10 67.4 37 100.0
Cpa.g.sc25.43 Carica papaya HOM05D007812 ORTHO05D009912 1.5e-09 66.2 43 81.4
COL.COLO4_30669 Corchorus olitorius HOM05D007812 ORTHO05D009912 3.3e-09 65.1 37 97.3
THA.LOC104822637 Tarenaya hassleriana HOM05D007812 ORTHO05D009912 4.3e-09 64.7 37 94.6
BcaB06g25431 Brassica carinata HOM05D007812 ORTHO05D009912 7.3e-09 63.9 40 85.0
Atru.chr1.3756 Acer truncatum HOM05D007812 ORTHO05D009912 1.3e-08 63.2 37 91.9
Ciclev10026913m.g Citrus clementina HOM05D007812 ORTHO05D009912 1.3e-08 63.2 36 94.4
Thecc.06G112400 Theobroma cacao HOM05D007812 ORTHO05D009912 1.3e-08 63.2 36 94.4
Potri.001G196150 Populus trichocarpa HOM05D007812 ORTHO05D009912 2.1e-08 62.4 37 91.9
Aa31LG10G880 Aethionema arabicum HOM05D007812 ORTHO05D009912 3.6e-08 61.6 37 86.5
Gohir.D06G199100 Gossypium hirsutum HOM05D007812 ORTHO05D009912 3.6e-08 61.6 37 89.2
Gorai.010G232000 Gossypium raimondii HOM05D007812 ORTHO05D009912 3.6e-08 61.6 37 89.2
RcHm_v2.0_Chr2g0143441 Rosa chinensis HOM05D007812 ORTHO05D009912 3.6e-08 61.6 36 88.9
Sabra03G0024000 Salix brachista HOM05D007812 ORTHO05D009912 3.6e-08 61.6 38 84.2
CiPaw.02G139600 Carya illinoinensis HOM05D007812 ORTHO05D009912 4.8e-08 61.2 37 86.5
CsaV3_7G034750 Cucumis sativus L. HOM05D007812 ORTHO05D009912 4.8e-08 61.2 36 88.9
PSO210G6368 Papaver somniferum HOM05D007812 ORTHO05D009912 4.8e-08 61.2 37 89.2
ClCG09G000730 Citrullus lanatus HOM05D007812 ORTHO05D009912 6.2e-08 60.8 36 86.1
Eucgr.J02853 Eucalyptus grandis HOM05D007812 ORTHO05D009912 6.2e-08 60.8 64 54.7
Lj3g0001021 Lotus japonicus HOM05D007812 ORTHO05D009912 6.2e-08 60.8 37 86.5
TWI31G1317 Tripterygium wilfordii HOM05D007812 ORTHO05D009912 6.2e-08 60.8 37 86.5
arahy.Tifrunner.gnm1.ann1.4U9STT Arachis hypogaea HOM05D007812 ORTHO05D009912 8.1e-08 60.5 37 83.8
arahy.Tifrunner.gnm1.ann1.B0MA7N Arachis hypogaea HOM05D007812 ORTHO05D009912 8.1e-08 60.5 50 62.0
Medtr8g017190 Medicago truncatula HOM05D007812 ORTHO05D009912 8.1e-08 60.5 37 83.8
A05p35560 Brassica napus HOM05D007812 ORTHO05D009912 1.1e-07 60.1 37 86.5
C05p53950 Brassica napus HOM05D007812 ORTHO05D009912 1.1e-07 60.1 37 86.5
BolC5t34061H Brassica oleracea HOM05D007812 ORTHO05D009912 1.1e-07 60.1 37 86.5
BraA05t22365Z Brassica rapa HOM05D007812 ORTHO05D009912 1.1e-07 60.1 37 86.5
Thhalv10021887m.g Eutrema salsugineum HOM05D007812 ORTHO05D009912 1.1e-07 60.1 37 86.5
Sp3g12050 Schrenkiella parvula HOM05D007812 ORTHO05D009912 1.1e-07 60.1 37 86.5
CSS0045617 Camellia sinensis var. sinensis HOM05D007812 ORTHO05D009912 1.4e-07 59.7 37 83.8
CARHR088620 Cardamine hirsuta HOM05D007812 ORTHO05D009912 1.4e-07 59.7 37 83.8
Nn8g38844 Nelumbo nucifera HOM05D007812 ORTHO05D009912 1.4e-07 59.7 36 86.1
Phvul.010G138300 Phaseolus vulgaris HOM05D007812 ORTHO05D009912 1.4e-07 59.7 37 81.1
Cfa003579 Carpinus fangiana HOM05D007812 ORTHO05D009912 1.8e-07 59.3 37 83.8
QL05p012120 Quercus lobata HOM05D007812 ORTHO05D009912 1.8e-07 59.3 41 75.6
Haze_15960 Corylus avellana HOM05D007812 ORTHO05D009912 2.4e-07 58.9 37 81.1
Glyma.07G009200 Glycine max HOM05D007812 ORTHO05D009912 2.4e-07 58.9 35 85.7
Psat4g188240 Pisum sativum HOM05D007812 ORTHO05D009912 2.4e-07 58.9 37 83.8
Potri.003G037100 Populus trichocarpa HOM05D007812 ORTHO05D009912 2.4e-07 58.9 37 86.5
Sed0004047 Sechium edule HOM05D007812 ORTHO05D009912 2.4e-07 58.9 37 83.8
TPR.G19291 Trifolium pratense HOM05D007812 ORTHO05D009912 2.4e-07 58.9 37 81.1
Carub.0003s1338 Capsella rubella HOM05D007812 ORTHO05D009912 3.1e-07 58.5 37 83.8
SalBow7G0845 Salvia bowleyana HOM05D007812 ORTHO05D009912 3.1e-07 58.5 37 81.1
Ah.08g216270 Amaranthus hybridus HOM05D007812 ORTHO05D009912 4.0e-07 58.2 37 81.1
AL3G25990 Arabidopsis lyrata HOM05D007812 ORTHO05D009912 4.0e-07 58.2 37 83.8
AT3G13845 Arabidopsis thaliana HOM05D007812 ORTHO05D009912 4.0e-07 58.2 37 83.8
arahy.Tifrunner.gnm1.ann1.X39S4K Arachis hypogaea HOM05D007812 ORTHO05D009912 4.0e-07 58.2 37 81.1
ECA247G3511 Erigeron canadensis HOM05D007812 ORTHO05D009912 4.0e-07 58.2 37 81.1
Cc04_g01890 Coffea canephora HOM05D007812 ORTHO05D009912 6.9e-07 57.4 37 78.4
FAN09G2870 Fragaria x ananassa HOM05D007812 ORTHO05D009912 6.9e-07 57.4 36 83.3
Lalb_Chr04g0263241 Lupinus albus HOM05D007812 ORTHO05D009912 6.9e-07 57.4 37 81.1
Nitab4.5_0000174g0150 Nicotiana tabacum HOM05D007812 ORTHO05D009912 6.9e-07 57.4 41 68.3
Sabra03G0023900 Salix brachista HOM05D010635 ORTHO05D006336 6.9e-07 57.4 53 60.4
Ca_23324_v3 Cicer arietinum L. HOM05D007812 ORTHO05D009912 9.0e-07 57.0 37 75.7
PGR102G2903 Punica granatum HOM05D007812 ORTHO05D009912 9.0e-07 57.0 37 78.4
Hma1.2p1_0496F.1_g165840 Hydrangea macrophylla HOM05D007812 ORTHO05D009912 1.2e-06 56.6 37 75.7
MBI01_g09945_MAGBIO Magnolia biondii HOM05D007812 ORTHO05D009912 1.2e-06 56.6 37 81.1
Nitab4.5_0001087g0010 Nicotiana tabacum HOM05D007812 ORTHO05D009912 1.2e-06 56.6 37 75.7
Hund18713 Selenicereus undatus HOM05D007812 ORTHO05D009912 1.2e-06 56.6 37 78.4
Sc15g0000160 Simmondsia chinensis HOM05D007812 ORTHO05D009912 1.2e-06 56.6 37 78.4
Sopen04g026470 Solanum pennellii HOM05D007812 ORTHO05D009912 1.2e-06 56.6 37 75.7
Peaxi162Scf00066g01714 Petunia axillaris HOM05D007812 ORTHO05D009912 2.0e-06 55.8 37 73.0
PGSC0003DMG400024854 Solanum tuberosum HOM05D007812 ORTHO05D009912 2.6e-06 55.5 37 73.0
Atru.chr1.3738 Acer truncatum HOM05D007812 ORTHO05D009912 3.4e-06 55.1 42 73.8
CAN.G1040.8 Capsicum annuum HOM05D007812 ORTHO05D009912 5.8e-06 54.3 37 73.0
Gohir.A06G190700 Gossypium hirsutum HOM05D007812 ORTHO05D009912 7.6e-06 53.9 31 90.3


User provided reference genes

Program Settings