Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.D05G013100 Gossypium hirsutum HOM05D007673 ORTHO05D009278 4.1e-73 278.1 154 100.0
Gorai.009G013100 Gossypium raimondii HOM05D007673 ORTHO05D009278 4.1e-73 278.1 154 100.0
Gohir.A05G012100 Gossypium hirsutum HOM05D007673 ORTHO05D009278 1.7e-71 272.7 154 98.1
COL.COLO4_24126 Corchorus olitorius HOM05D007673 ORTHO05D009278 1.4e-33 146.7 166 57.8
Thecc.09G139900 Theobroma cacao HOM05D007673 ORTHO05D009278 2.1e-32 142.9 157 58.0
Dinv41432 Davidia involucrata HOM05D007673 ORTHO05D009278 1.3e-21 107.1 159 45.3
Sabra06G0043300 Salix brachista HOM05D007673 ORTHO05D009278 4.0e-20 102.1 163 42.9
TAR383G0338 Trochodendron aralioides HOM05D007673 ORTHO05D009278 2.0e-19 99.8 162 41.4
Potri.006G060000 Populus trichocarpa HOM05D007673 ORTHO05D009278 7.6e-19 97.8 152 46.1
QL02p091069 Quercus lobata HOM05D007673 ORTHO05D009278 1.7e-18 96.7 160 48.1
Manes.06G043400 Manihot esculenta HOM05D007673 ORTHO05D009278 1.4e-17 93.6 159 42.8
Manes.14G120200 Manihot esculenta HOM05D007673 ORTHO05D009278 3.2e-17 92.4 158 46.8
TAR625G1436 Trochodendron aralioides HOM05D007673 ORTHO05D009278 9.3e-17 90.9 160 40.0
Actinidia21918 Actinidia chinensis HOM05D007673 ORTHO05D009278 1.0e-15 87.4 163 44.8
Actinidia04238 Actinidia chinensis HOM05D007673 ORTHO05D009278 1.3e-15 87.0 160 40.6
Lalb_Chr07g0179441 Lupinus albus HOM05D007673 ORTHO05D009278 1.3e-15 87.0 159 40.3
Nn8g39681 Nelumbo nucifera HOM05D007673 ORTHO05D009278 3.0e-15 85.9 154 42.2
Dinv43178 Davidia involucrata HOM05D007673 ORTHO05D009278 5.1e-15 85.1 157 36.9
MBI14_g03622_MAGBIO Magnolia biondii HOM05D007673 ORTHO05D009278 8.7e-15 84.3 159 40.3
CiPaw.15G183400 Carya illinoinensis HOM05D007673 ORTHO05D009278 5.6e-14 81.6 167 46.1
CiPaw.16G118400 Carya illinoinensis HOM05D007673 ORTHO05D009278 5.6e-14 81.6 165 35.2
GSVIVG01012874001 Vitis vinifera HOM05D007673 ORTHO05D009278 5.6e-14 81.6 156 43.6
Nn2g12220 Nelumbo nucifera HOM05D007673 ORTHO05D009278 1.3e-13 80.5 164 41.5
TWI32G1294 Tripterygium wilfordii HOM05D007673 ORTHO05D009278 1.6e-13 80.1 149 37.6
Gohir.D06G050300 Gossypium hirsutum HOM05D012006 ORTHO05D014172 4.8e-13 78.6 70 62.9
Gorai.010G057200 Gossypium raimondii HOM05D012006 ORTHO05D014172 4.8e-13 78.6 70 62.9
Gohir.A06G051301 Gossypium hirsutum HOM05D012006 ORTHO05D014172 8.1e-13 77.8 70 61.4
Potri.018G115601 Populus trichocarpa HOM05D007673 ORTHO05D009278 1.5e-11 73.6 163 39.3
Aqoxy7G03558 Aquilegia oxysepala HOM05D007673 ORTHO05D009278 4.5e-11 72.0 161 34.2
CSS0039366 Camellia sinensis var. sinensis HOM05D007673 ORTHO05D009278 5.8e-11 71.6 159 39.0
Lalb_Chr13g0301271 Lupinus albus HOM05D007673 ORTHO05D009278 1.3e-10 70.5 159 34.0
Peaxi162Scf00088g00016 Petunia axillaris HOM05D007673 ORTHO05D009278 1.7e-10 70.1 154 42.9
TWI34G1167 Tripterygium wilfordii HOM05D007673 ORTHO05D009278 1.7e-10 70.1 157 35.7
MBI15_g28791_MAGBIO Magnolia biondii HOM05D007673 ORTHO05D009278 8.4e-10 67.8 115 41.7
Gohir.A08G092000 Gossypium hirsutum HOM05D012006 ORTHO05D014172 1.4e-09 67.0 69 59.4
MD15G1160900 Malus domestica HOM05D007673 ORTHO05D009278 3.2e-09 65.9 159 30.8
MD02G1016300 Malus domestica HOM05D007673 ORTHO05D009278 7.1e-09 64.7 164 41.5
Prupe.7G256100 Prunus persica HOM05D007673 ORTHO05D009278 9.3e-09 64.3 169 38.5
Eucgr.C04106 Eucalyptus grandis HOM05D007673 ORTHO05D009278 1.2e-08 63.9 93 47.3
Oeu051709.1 Olea europaea HOM05D007673 ORTHO05D009278 1.6e-08 63.5 149 32.9
Rhsim01G0051900 Rhododendron simsii HOM05D007673 ORTHO05D009278 2.1e-08 63.2 189 31.7
Cc06_g07510 Coffea canephora HOM05D007673 ORTHO05D009278 2.7e-08 62.8 161 38.5
Gohir.D08G102350 Gossypium hirsutum HOM05D012006 ORTHO05D014172 2.7e-08 62.8 69 56.5
Glyma.13G165000 Glycine max HOM05D007673 ORTHO05D009278 3.5e-08 62.4 162 34.6
Sed0013238 Sechium edule HOM05D007673 ORTHO05D009278 3.5e-08 62.4 156 34.6
Glyma.17G106100 Glycine max HOM05D007673 ORTHO05D009278 4.6e-08 62.0 159 35.2
PGSC0003DMG400030693 Solanum tuberosum HOM05D007673 ORTHO05D009278 4.6e-08 62.0 132 34.1
PSO170G6343 Papaver somniferum HOM05D007673 ORTHO05D009278 7.9e-08 61.2 169 32.5
Phvul.009G210216 Phaseolus vulgaris HOM05D007673 ORTHO05D009278 7.9e-08 61.2 165 34.5
Medtr2g450420 Medicago truncatula HOM05D007673 ORTHO05D009278 2.3e-07 59.7 159 31.4
Medtr4g116360 Medicago truncatula HOM05D007673 ORTHO05D009278 2.3e-07 59.7 160 35.0
PSO017G0897 Papaver somniferum HOM05D007673 ORTHO05D009278 3.0e-07 59.3 166 31.9
CsaV3_1G028420 Cucumis sativus L. HOM05D007673 ORTHO05D009278 3.9e-07 58.9 104 37.5
Psat0s503g0080 Pisum sativum HOM05D007673 ORTHO05D009278 3.9e-07 58.9 150 30.7
Psat0s5432g0040 Pisum sativum HOM05D007673 ORTHO05D009278 3.9e-07 58.9 150 30.7
Nitab4.5_0003305g0020 Nicotiana tabacum HOM05D007673 ORTHO05D009278 1.5e-06 57.0 143 39.9
arahy.Tifrunner.gnm1.ann1.5L22XG Arachis hypogaea HOM05D007673 ORTHO05D009278 1.9e-06 56.6 157 36.3
Oeu055924.1 Olea europaea HOM05D007673 ORTHO05D009278 4.3e-06 55.5 147 32.7
Solyc07g007270.3 Solanum lycopersicum HOM05D007673 ORTHO05D009278 7.4e-06 54.7 114 38.6
Lj6g0015094 Lotus japonicus HOM05D007673 ORTHO05D009278 9.6e-06 54.3 159 30.2


User provided reference genes

Program Settings