Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.008G220900 Gossypium raimondii HOM05D007357 ORTHO05D009314 1.2e-95 353.2 186 100.0
Gohir.D12G206000 Gossypium hirsutum HOM05D007357 ORTHO05D009314 1.9e-93 345.9 186 98.4
Gohir.A12G203400 Gossypium hirsutum HOM05D007357 ORTHO05D009314 1.8e-91 339.3 186 96.8
COL.COLO4_16848 Corchorus olitorius HOM05D007357 ORTHO05D009314 1.8e-62 243.0 188 72.9
Duzib068G0657 Durio zibethinus HOM05D007357 ORTHO05D009314 6.9e-59 231.1 156 82.1
Cpa.g.sc223.2 Carica papaya HOM05D007357 ORTHO05D009314 7.4e-45 184.5 180 58.9
Thecc.03G316500 Theobroma cacao HOM05D007357 ORTHO05D009314 2.8e-44 182.6 141 73.8
Actinidia14748 Actinidia chinensis HOM05D007357 ORTHO05D009314 5.9e-42 174.9 180 57.8
Haze_08047 Corylus avellana HOM05D007357 ORTHO05D009314 1.0e-41 174.1 195 54.9
Prupe.5G019800 Prunus persica HOM05D007357 ORTHO05D009314 1.0e-41 174.1 175 58.9
CiPaw.11G103400 Carya illinoinensis HOM05D007357 ORTHO05D009314 2.9e-41 172.6 177 61.0
CSS0024010 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 1.5e-40 170.2 196 53.1
Rhsim07G0138300 Rhododendron simsii HOM05D007357 ORTHO05D009314 1.9e-40 169.9 184 55.4
TWI34G1422 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 5.5e-40 168.3 190 53.7
Potri.001G132232 Populus trichocarpa HOM05D007357 ORTHO05D009314 7.2e-40 167.9 183 53.6
QL02p024644 Quercus lobata HOM05D007357 ORTHO05D009314 9.4e-40 167.5 195 54.9
TWI34G1682 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 2.1e-39 166.4 190 52.6
CsaV3_3G030320 Cucumis sativus L. HOM05D007357 ORTHO05D009314 4.0e-38 162.2 193 51.3
VMungo1215G1709 Vigna mungo HOM05D007357 ORTHO05D009314 5.7e-37 158.3 174 53.4
FvH4_5g24040 Fragaria vesca HOM05D007357 ORTHO05D009314 1.3e-36 157.1 122 68.0
FAN18G2492 Fragaria x ananassa HOM05D007357 ORTHO05D009314 1.3e-36 157.1 122 68.0
FAN18G4511 Fragaria x ananassa HOM05D007357 ORTHO05D009314 1.3e-36 157.1 122 68.0
MD06G1015900 Malus domestica HOM05D007357 ORTHO05D009314 1.3e-36 157.1 172 55.8
Phvul.002G128100 Phaseolus vulgaris HOM05D007357 ORTHO05D009314 2.2e-36 156.4 176 52.8
RcHm_v2.0_Chr7g0213521 Rosa chinensis HOM05D007357 ORTHO05D009314 3.7e-36 155.6 153 57.5
Manes.17G008100 Manihot esculenta HOM05D007357 ORTHO05D009314 1.1e-35 154.1 186 50.0
arahy.Tifrunner.gnm1.ann1.0Q5JCD Arachis hypogaea HOM05D007357 ORTHO05D009314 1.8e-35 153.3 176 54.0
arahy.Tifrunner.gnm1.ann1.JPN6B0 Arachis hypogaea HOM05D007357 ORTHO05D009314 1.8e-35 153.3 176 54.0
FvH4_3g08760 Fragaria vesca HOM05D007357 ORTHO05D009314 1.8e-35 153.3 122 66.4
Cfa012604 Carpinus fangiana HOM05D007357 ORTHO05D009314 2.4e-35 152.9 222 46.8
Nn4g25471 Nelumbo nucifera HOM05D007357 ORTHO05D009314 2.4e-35 152.9 175 52.6
Ciclev10002529m.g Citrus clementina HOM05D007357 ORTHO05D009314 4.1e-35 152.1 124 64.5
Migut.A00548 Erythranthe guttata HOM05D007357 ORTHO05D009314 1.6e-34 150.2 184 50.5
FAN08G0560 Fragaria x ananassa HOM05D007357 ORTHO05D009314 1.6e-34 150.2 122 65.6
HanXRQChr17g0539311 Helianthus annuus HOM05D007357 ORTHO05D009314 1.0e-33 147.5 160 50.6
TAR629G3058 Trochodendron aralioides HOM05D007357 ORTHO05D009314 1.0e-33 147.5 178 51.7
CANSAT21G2249 Cannabis sativa HOM05D007357 ORTHO05D009314 2.9e-33 146.0 178 51.7
Sed0001819 Sechium edule HOM05D007357 ORTHO05D009314 2.9e-33 146.0 189 47.6
HPP92_025510 Vanilla planifolia HOM05D007357 ORTHO05D009314 3.8e-33 145.6 185 45.9
Nitab4.5_0001033g0080 Nicotiana tabacum HOM05D007357 ORTHO05D009314 6.5e-33 144.8 189 48.1
ClCG07G002370 Citrullus lanatus HOM05D007357 ORTHO05D009314 8.5e-33 144.4 192 49.5
Peaxi162Scf00408g00712 Petunia axillaris HOM05D007357 ORTHO05D009314 1.5e-32 143.7 192 47.4
Ah.07g201200 Amaranthus hybridus HOM05D007357 ORTHO05D009314 1.2e-31 140.6 160 50.0
MELO3C022754.2 Cucumis melo HOM05D007357 ORTHO05D009314 1.2e-31 140.6 193 46.1
Cc08_g05250 Coffea canephora HOM05D007357 ORTHO05D009314 1.6e-31 140.2 129 59.7
Sed0016962 Sechium edule HOM05D007357 ORTHO05D009314 1.6e-31 140.2 134 58.2
PGSC0003DMG400030879 Solanum tuberosum HOM05D007357 ORTHO05D009314 2.7e-31 139.4 127 58.3
HPP92_025525 Vanilla planifolia HOM05D007357 ORTHO05D009314 4.7e-31 138.7 185 43.8
ECA246G3443 Erigeron canadensis HOM05D007357 ORTHO05D009314 1.4e-30 137.1 200 43.5
Sc07g0008390 Simmondsia chinensis HOM05D007357 ORTHO05D009314 1.8e-30 136.7 136 55.9
Glyma.01G150100 Glycine max HOM05D007357 ORTHO05D009314 2.3e-30 136.3 178 50.0
Sopen08g024580 Solanum pennellii HOM05D007357 ORTHO05D009314 2.3e-30 136.3 185 47.6
Eucgr.D02601 Eucalyptus grandis HOM05D007357 ORTHO05D009314 6.8e-30 134.8 188 48.9
CAN.G1269.3 Capsicum annuum HOM05D007357 ORTHO05D009314 1.2e-29 134.0 122 59.0
AUR62027337 Chenopodium quinoa HOM05D007357 ORTHO05D009314 1.2e-29 134.0 127 56.7
CSS0046502 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 2.0e-29 133.3 167 51.5
AUR62044266 Chenopodium quinoa HOM05D007357 ORTHO05D009314 4.4e-29 132.1 182 46.2
vmacro13970 Vaccinium macrocarpon HOM05D007357 ORTHO05D009314 5.7e-29 131.7 207 46.4
AUR62007392 Chenopodium quinoa HOM05D007357 ORTHO05D009314 1.7e-28 130.2 169 47.3
Medtr5g026790 Medicago truncatula HOM05D007357 ORTHO05D009314 2.2e-28 129.8 178 47.8
PSO063G0202 Papaver somniferum HOM05D007357 ORTHO05D009314 2.2e-28 129.8 127 55.1
Lsat_1_v5_gn_3_28060 Lactuca sativa HOM05D007357 ORTHO05D009314 3.7e-28 129.0 196 43.4
ATR0829G081 Amborella trichopoda HOM05D007357 ORTHO05D009314 2.4e-27 126.3 171 40.9
Lj2g0006468 Lotus japonicus HOM05D007357 ORTHO05D009314 3.1e-27 125.9 178 45.5
Oeu059314.1 Olea europaea HOM05D007357 ORTHO05D009314 5.4e-27 125.2 207 43.0
Psat2g142360 Pisum sativum HOM05D007357 ORTHO05D009314 4.5e-26 122.1 180 46.1
DCAR_008186 Daucus carota HOM05D007357 ORTHO05D009314 7.7e-26 121.3 159 50.3
CDE12G0114 Ceratophyllum demersum HOM05D007357 ORTHO05D009314 3.8e-25 119.0 131 48.9
Aqoxy5G03983 Aquilegia oxysepala HOM05D007357 ORTHO05D009314 5.0e-25 118.6 171 40.4
MD06G1016600 Malus domestica HOM05D007357 ORTHO05D009314 3.3e-24 115.9 162 46.9
unitig_32.g10966 Utricularia gibba HOM05D007357 ORTHO05D009314 4.2e-24 115.5 177 41.2
TWI79G1144 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 5.5e-24 115.2 156 48.1
Hma1.2p1_1179F.1_g264570 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 1.6e-23 113.6 167 46.7
Oeu042216.1 Olea europaea HOM05D007357 ORTHO05D009314 3.6e-23 112.5 154 48.1
SGA_v2.0_scaffold89G27413 Striga asiatica HOM05D003343 ORTHO05D003787 8.0e-23 111.3 118 58.5
arahy.Tifrunner.gnm1.ann1.L1IIZH Arachis hypogaea HOM05D007357 ORTHO05D009314 1.0e-22 110.9 160 45.6
EL10Ac5g11952 Beta vulgaris HOM05D000153 ORTHO05D000118 4.0e-22 109.0 81 67.9
Solyc08g075930.4 Solanum lycopersicum HOM05D007357 ORTHO05D009314 5.2e-22 108.6 155 47.1
Os07g0452600 Oryza sativa ssp. japonica HOM05D007357 ORTHO05D009314 6.8e-22 108.2 120 48.3
Lalb_Chr05g0215411 Lupinus albus HOM05D007357 ORTHO05D009314 5.7e-21 105.1 177 44.6
ECA240G0146 Erigeron canadensis HOM05D007357 ORTHO05D009314 7.5e-21 104.8 178 38.2
Haze_08057 Corylus avellana HOM05D007357 ORTHO05D009314 2.2e-20 103.2 84 64.3
Glyma.09G214200 Glycine max HOM05D007357 ORTHO05D009314 2.8e-20 102.8 177 42.4
FAN11G2380 Fragaria x ananassa HOM05D007357 ORTHO05D009314 5.4e-19 98.6 77 64.9
PSO782G0982 Papaver somniferum HOM05D007357 ORTHO05D009314 1.6e-18 97.1 99 54.5
Zm00001eb096560 Zea mays HOM05D007357 ORTHO05D009314 1.6e-18 97.1 178 38.8
TPR.G17258 Trifolium pratense HOM05D007357 ORTHO05D009314 2.7e-18 96.3 183 41.0
Sabra01G0102000 Salix brachista HOM05D007357 ORTHO05D009314 3.5e-18 95.9 76 60.5
Hund11140 Selenicereus undatus HOM05D007357 ORTHO05D009314 5.9e-18 95.1 145 46.2
Nitab4.5_0001786g0050 Nicotiana tabacum HOM05D007357 ORTHO05D009314 8.6e-17 91.3 202 35.1
Zm00001eb171770 Zea mays HOM05D007357 ORTHO05D009314 5.2e-14 82.0 149 38.3
Os08g0180400 Oryza sativa ssp. japonica HOM05D007357 ORTHO05D009314 2.6e-13 79.7 76 50.0
MD06G1016300 Malus domestica HOM05D007357 ORTHO05D009314 3.7e-12 75.9 53 71.7
Ca_25098_v3 Cicer arietinum L. HOM05D007357 ORTHO05D009314 8.3e-12 74.7 150 41.3
CSS0020054 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 2.0e-10 70.1 56 64.3
arahy.Tifrunner.gnm1.ann1.F5EPY8 Arachis hypogaea HOM05D007357 ORTHO05D009314 4.6e-10 68.9 51 70.6
CSS0037866 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 7.8e-10 68.2 56 62.5
Hma1.2p1_0784F.1_g217055 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 3.0e-09 66.2 85 48.2
Hma1.2p1_0944F.1_g240000 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 3.0e-09 66.2 85 48.2
PGR031G1183 Punica granatum HOM05D007357 ORTHO05D009314 1.5e-08 63.9 192 30.7
Nitab4.5_0018136g0010 Nicotiana tabacum HOM05D007357 ORTHO05D009314 7.3e-08 61.6 54 63.0
Oeu059300.1 Olea europaea HOM05D007357 ORTHO05D009314 4.7e-07 58.9 68 50.0
AagrBONN_evm.TU.Sc2ySwM_228.1692 Anthoceros agrestis HOM05D007357 ORTHO05D009314 6.2e-07 58.5 115 33.0


User provided reference genes

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