Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.008G144900 Gossypium raimondii HOM05D006737 ORTHO05D008418 2.3e-187 658.7 324 100.0
Gohir.D12G133900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.7e-185 652.5 324 99.1
Gohir.A12G130100 Gossypium hirsutum HOM05D006737 ORTHO05D008418 9.2e-184 646.7 324 98.5
Thecc.01G301300 Theobroma cacao HOM05D006737 ORTHO05D008418 2.5e-128 462.6 358 66.5
Ciclev10021225m.g Citrus clementina HOM05D006737 ORTHO05D008418 1.3e-121 440.3 324 65.7
Atru.chr5.1140 Acer truncatum HOM05D006737 ORTHO05D008418 2.5e-120 436.0 324 64.5
Prupe.8G262100 Prunus persica HOM05D006737 ORTHO05D008418 2.7e-119 432.6 324 64.5
Gohir.A08G076400 Gossypium hirsutum HOM05D006737 ORTHO05D008418 3.6e-119 432.2 287 73.5
Gohir.D08G085900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 3.0e-118 429.1 303 70.6
Gorai.004G090400 Gossypium raimondii HOM05D006737 ORTHO05D008418 5.2e-118 428.3 303 70.6
Potri.002G203900 Populus trichocarpa HOM05D006737 ORTHO05D008418 5.2e-118 428.3 313 66.1
MD03G1288800 Malus domestica HOM05D006737 ORTHO05D008418 5.7e-117 424.9 324 63.3
Cfa005906 Carpinus fangiana HOM05D006737 ORTHO05D008418 4.8e-116 421.8 316 65.8
FvH4_2g25800 Fragaria vesca HOM05D006737 ORTHO05D008418 4.8e-116 421.8 325 65.2
FAN24G1027 Fragaria x ananassa HOM05D006737 ORTHO05D008418 4.8e-116 421.8 325 65.2
MD11G1309100 Malus domestica HOM05D006737 ORTHO05D008418 2.4e-115 419.5 313 64.2
RcHm_v2.0_Chr6g0294111 Rosa chinensis HOM05D006737 ORTHO05D008418 2.4e-115 419.5 315 65.1
FAN15G3576 Fragaria x ananassa HOM05D006737 ORTHO05D008418 4.1e-115 418.7 325 64.6
Manes.01G219800 Manihot esculenta HOM05D006737 ORTHO05D008418 4.1e-115 418.7 322 62.7
Haze_04944 Corylus avellana HOM05D006737 ORTHO05D008418 4.5e-114 415.2 314 65.0
CSS0030900 Camellia sinensis var. sinensis HOM05D006737 ORTHO05D008418 2.9e-113 412.5 327 63.9
FAN27G1696 Fragaria x ananassa HOM05D006737 ORTHO05D008418 1.9e-112 409.8 338 62.1
Duzib138G1512 Durio zibethinus HOM05D006737 ORTHO05D008418 1.6e-111 406.8 262 75.2
TWI14G0449 Tripterygium wilfordii HOM05D006737 ORTHO05D008418 2.1e-111 406.4 292 66.1
Cpa.g.sc9.256 Carica papaya HOM05D006737 ORTHO05D008418 1.8e-110 403.3 324 59.6
GSVIVG01028025001 Vitis vinifera HOM05D006737 ORTHO05D008418 2.3e-110 402.9 285 66.7
Sabra02G0155300 Salix brachista HOM05D006737 ORTHO05D008418 4.4e-109 398.7 334 59.3
CiPaw.07G109800 Carya illinoinensis HOM05D006737 ORTHO05D008418 3.7e-108 395.6 351 58.1
vmacro02447 Vaccinium macrocarpon HOM05D006737 ORTHO05D008418 1.1e-107 394.0 318 62.6
FAN20G1602 Fragaria x ananassa HOM05D006737 ORTHO05D008418 5.3e-107 391.7 320 62.5
Nn3g21504 Nelumbo nucifera HOM05D006737 ORTHO05D008418 1.2e-106 390.6 292 64.0
Eucgr.H01107 Eucalyptus grandis HOM05D006737 ORTHO05D008418 7.7e-106 387.9 294 62.6
QL12p028401 Quercus lobata HOM05D006737 ORTHO05D008418 5.0e-105 385.2 323 57.9
TAR365G0544 Trochodendron aralioides HOM05D006737 ORTHO05D008418 5.5e-104 381.7 325 60.9
Lj6g0001904 Lotus japonicus HOM05D006737 ORTHO05D008418 1.5e-101 373.6 290 61.0
CANSAT25G2451 Cannabis sativa HOM05D006737 ORTHO05D008418 2.0e-101 373.2 322 58.4
Rhsim13G0009900 Rhododendron simsii HOM05D006737 ORTHO05D008418 3.4e-101 372.5 305 61.6
CiPaw.07G109600 Carya illinoinensis HOM05D006737 ORTHO05D008418 5.7e-101 371.7 255 67.5
PGR119G0152 Punica granatum HOM05D006737 ORTHO05D008418 1.3e-100 370.5 293 59.0
MBI19_g26092_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 5.4e-99 365.2 308 57.8
Aqoxy2G02933 Aquilegia oxysepala HOM05D006737 ORTHO05D008418 7.7e-98 361.3 304 57.9
Glyma.19G211400 Glycine max HOM05D006737 ORTHO05D008418 5.5e-96 355.1 294 58.8
Sopen06g035940 Solanum pennellii HOM05D006737 ORTHO05D008418 3.0e-94 349.4 293 58.7
Solyc06g084570.4 Solanum lycopersicum HOM05D006737 ORTHO05D008418 8.9e-94 347.8 297 57.9
Actinidia01489 Actinidia chinensis HOM05D006737 ORTHO05D008418 2.6e-93 346.3 237 68.4
ECA236G1530 Erigeron canadensis HOM05D006737 ORTHO05D008418 4.4e-93 345.5 313 54.3
PSO407G0435 Papaver somniferum HOM05D006737 ORTHO05D008418 4.4e-93 345.5 312 54.2
Hma1.2p1_0491F.1_g164620 Hydrangea macrophylla HOM05D006737 ORTHO05D008418 3.7e-92 342.4 303 57.4
MSTRG.12607 Avicennia marina HOM05D006737 ORTHO05D008418 4.9e-92 342.0 328 53.0
BcaB01g02446 Brassica carinata HOM05D006737 ORTHO05D008418 4.9e-92 342.0 313 53.4
Thhalv10028823m.g Eutrema salsugineum HOM05D006737 ORTHO05D008418 6.3e-92 341.7 289 56.1
PSO170G1161 Papaver somniferum HOM05D006737 ORTHO05D008418 8.3e-92 341.3 304 54.3
AL6G50710 Arabidopsis lyrata HOM05D006737 ORTHO05D008418 3.2e-91 339.3 288 55.2
Phvul.001G207600 Phaseolus vulgaris HOM05D006737 ORTHO05D008418 4.1e-91 339.0 314 53.5
EL10Ac7g17513 Beta vulgaris HOM05D006737 ORTHO05D008418 5.4e-91 338.6 301 53.8
Hund05430 Selenicereus undatus HOM05D006737 ORTHO05D008418 5.4e-91 338.6 310 53.9
CAN.G1209.24 Capsicum annuum HOM05D006737 ORTHO05D008418 2.7e-90 336.3 283 57.6
CARHR250600 Cardamine hirsuta HOM05D006737 ORTHO05D008418 3.5e-90 335.9 288 54.9
ClCG01G014930 Citrullus lanatus HOM05D006737 ORTHO05D008418 4.5e-90 335.5 287 55.4
Sc05g0003760 Simmondsia chinensis HOM05D006737 ORTHO05D008418 4.5e-90 335.5 315 53.7
AUR62008669 Chenopodium quinoa HOM05D006737 ORTHO05D008418 1.7e-89 333.6 309 53.7
Aa31LG5G2050 Aethionema arabicum HOM05D006737 ORTHO05D008418 6.6e-89 331.6 292 54.1
Sp6g02290 Schrenkiella parvula HOM05D006737 ORTHO05D008418 8.6e-89 331.3 316 52.8
BcaC01g06761 Brassica carinata HOM05D006737 ORTHO05D008418 1.1e-88 330.9 310 53.9
Lsat_1_v5_gn_8_164261 Lactuca sativa HOM05D006737 ORTHO05D008418 3.3e-88 329.3 319 52.0
Carub.0006s3475 Capsella rubella HOM05D006737 ORTHO05D008418 4.3e-88 328.9 288 53.8
AUR62025575 Chenopodium quinoa HOM05D006737 ORTHO05D008418 4.3e-88 328.9 309 53.4
BolC3t16077H Brassica oleracea HOM05D006737 ORTHO05D008418 9.5e-88 327.8 320 51.9
MBI19_g25361_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 1.2e-87 327.4 348 50.0
SalBow2G2271 Salvia bowleyana HOM05D006737 ORTHO05D008418 2.1e-87 326.6 255 56.1
C03p37890 Brassica napus HOM05D006737 ORTHO05D008418 6.1e-87 325.1 321 51.7
CsaV3_6G041030 Cucumis sativus L. HOM05D006737 ORTHO05D008418 6.1e-87 325.1 294 53.7
A03p31080 Brassica napus HOM05D006737 ORTHO05D008418 8.0e-87 324.7 319 53.0
BraA03t12285Z Brassica rapa HOM05D006737 ORTHO05D008418 8.0e-87 324.7 319 53.0
DCAR_002840 Daucus carota HOM05D006737 ORTHO05D008418 1.8e-86 323.6 311 51.8
Nitab4.5_0004367g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 2.3e-86 323.2 330 49.7
MELO3C024580.2 Cucumis melo HOM05D006737 ORTHO05D008418 5.2e-86 322.0 294 53.4
CDE01G0235 Ceratophyllum demersum HOM05D006737 ORTHO05D008418 1.5e-85 320.5 318 50.9
arahy.Tifrunner.gnm1.ann1.AY1VU4 Arachis hypogaea HOM05D006737 ORTHO05D008418 9.8e-85 317.8 305 51.8
COL.COLO4_23338 Corchorus olitorius HOM05D006737 ORTHO05D008418 9.8e-85 317.8 210 72.9
VMungo1383G2597 Vigna mungo HOM05D006737 ORTHO05D008418 2.2e-84 316.6 257 57.6
Cc01_g20900 Coffea canephora HOM05D006737 ORTHO05D008418 3.7e-84 315.8 322 50.3
HanXRQChr04g0114161 Helianthus annuus HOM05D006737 ORTHO05D008418 1.1e-83 314.3 284 53.9
Migut.O00484 Erythranthe guttata HOM05D006737 ORTHO05D008418 1.4e-83 313.9 305 53.4
Migut.N01508 Erythranthe guttata HOM05D006737 ORTHO05D008418 3.2e-83 312.8 305 53.1
SGA_v2.0_scaffold198G41142 Striga asiatica HOM05D006737 ORTHO05D008418 4.1e-83 312.4 315 51.7
Peaxi162Scf00140g01213 Petunia axillaris HOM05D006737 ORTHO05D008418 7.0e-83 311.6 259 58.3
Lalb_Chr02g0146391 Lupinus albus HOM05D006737 ORTHO05D008418 3.0e-81 306.2 275 53.1
Oeu048335.1 Olea europaea HOM05D006737 ORTHO05D008418 3.0e-81 306.2 235 61.3
Migut.J01135 Erythranthe guttata HOM05D006737 ORTHO05D008418 1.6e-79 300.4 281 54.8
AT4G02405 Arabidopsis thaliana HOM05D006737 ORTHO05D008418 6.8e-78 295.0 266 53.4
arahy.Tifrunner.gnm1.ann1.B4PCIP Arachis hypogaea HOM05D006737 ORTHO05D008418 7.5e-77 291.6 265 52.8
Lj2A1195G25 Lonicera japonica HOM05D006737 ORTHO05D008418 2.1e-66 256.9 270 50.7
Os07g0247100 Oryza sativa ssp. japonica HOM05D006737 ORTHO05D008418 3.5e-66 256.1 292 43.2
Zm00001eb097030 Zea mays HOM05D006737 ORTHO05D008418 1.8e-62 243.8 289 43.6
Sed0017513 Sechium edule HOM05D006737 ORTHO05D008418 2.0e-61 240.4 218 53.2
Pp3c24_12380 Physcomitrium patens HOM05D006737 ORTHO05D008418 1.9e-43 180.6 298 36.6
Dinv33057 Davidia involucrata HOM05D006737 ORTHO05D008418 3.2e-43 179.9 162 56.2
Nitab4.5_0002820g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 5.1e-41 172.6 140 58.6
Oeu010666.1 Olea europaea HOM05D006737 ORTHO05D008418 1.1e-40 171.4 133 57.1
PGSC0003DMG400024036 Solanum tuberosum HOM05D006737 ORTHO05D008418 2.0e-37 160.6 133 57.9
Mapoly0132s0018 Marchantia polymorpha HOM05D006737 ORTHO05D008418 1.7e-28 131.0 236 33.1
arahy.Tifrunner.gnm1.ann1.MB1A81 Arachis hypogaea HOM05D006737 ORTHO05D008418 6.5e-28 129.0 124 49.2
VMungo1383G3174 Vigna mungo HOM05D006737 ORTHO05D008418 2.3e-25 120.6 255 31.0
Dinv31287 Davidia involucrata HOM05D006737 ORTHO05D008418 1.1e-24 118.2 86 65.1
Dinv07247 Davidia involucrata HOM05D006737 ORTHO05D008418 3.3e-24 116.7 86 64.0
Dinv17961 Davidia involucrata HOM05D006737 ORTHO05D008418 8.2e-23 112.1 86 61.6
arahy.Tifrunner.gnm1.ann1.MU6BTE Arachis hypogaea HOM05D006737 ORTHO05D008418 2.2e-20 104.0 116 44.0
SEGI_39136 Sequoiadendron giganteum HOM05D006737 ORTHO05D008418 3.8e-20 103.2 141 41.8
BcaB01g02050 Brassica carinata HOM05D006737 ORTHO05D008418 9.1e-14 82.0 102 46.1
Dinv02523 Davidia involucrata HOM05D006737 ORTHO05D008418 5.9e-13 79.3 58 63.8
BcaB01g02447 Brassica carinata HOM05D006737 ORTHO05D008418 1.4e-11 74.7 63 58.7
Dinv32677 Davidia involucrata HOM05D006737 ORTHO05D008418 1.4e-09 68.2 53 58.5
Cre09.g387282 Chlamydomonas reinhardtii HOM05D006737 ORTHO05D008418 7.4e-08 62.4 326 22.4
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 6.3e-07 59.3 180 27.2
MCO02G241 Micromonas commoda HOM05D006737 ORTHO05D008418 8.2e-07 58.9 223 23.3
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 7.0e-06 55.8 221 25.3
Atru.chr9.1259 Acer truncatum HOM05D000593 ORTHO05D002268 9.1e-06 55.5 39 69.2
Cre01.g055469 Chlamydomonas reinhardtii HOM05D006737 ORTHO05D008418 9.1e-06 55.5 104 27.9


User provided reference genes

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