Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.008G144300 Gossypium raimondii HOM05D000963 ORTHO05D005131 3.9e-66 254.6 124 100.0
Gohir.A12G129550 Gossypium hirsutum HOM05D000963 ORTHO05D005131 8.7e-50 200.3 124 81.5
Gohir.1Z049680 Gossypium hirsutum HOM05D000963 ORTHO05D005131 3.8e-13 78.6 90 52.2
Sc05g0004130 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.5e-12 76.6 45 82.2
Sc25g0002000 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.9e-12 76.3 45 82.2
Migut.D01379 Erythranthe guttata HOM05D000963 ORTHO05D005131 4.2e-12 75.1 45 80.0
C09p39380 Brassica napus HOM05D000963 ORTHO05D005131 1.2e-11 73.6 85 52.9
Sc25g0002550 Simmondsia chinensis HOM05D000963 ORTHO05D005131 6.1e-11 71.2 45 77.8
CsaV3_4G036830 Cucumis sativus L. HOM05D000963 ORTHO05D005131 8.0e-11 70.9 44 72.7
Gohir.D01G121360 Gossypium hirsutum HOM05D000963 ORTHO05D005131 8.0e-11 70.9 91 47.3
arahy.Tifrunner.gnm1.ann1.A049RL Arachis hypogaea HOM05D000963 ORTHO05D005131 1.4e-10 70.1 49 69.4
arahy.Tifrunner.gnm1.ann1.R4PVYI Arachis hypogaea HOM05D000963 ORTHO05D004715 5.2e-10 68.2 49 67.3
C06p23110 Brassica napus HOM05D000963 ORTHO05D005131 5.2e-10 68.2 49 67.3
C09p24700 Brassica napus HOM05D000963 ORTHO05D005131 5.2e-10 68.2 49 67.3
BraSC143t45666Z Brassica rapa HOM05D000963 ORTHO05D005131 5.2e-10 68.2 49 67.3
BraSC25t45900Z Brassica rapa HOM05D000963 ORTHO05D005131 5.2e-10 68.2 49 67.3
LjContig00319g0011411 Lotus japonicus HOM05D000963 ORTHO05D005131 5.2e-10 68.2 49 67.3
Sed0026848 Sechium edule HOM05D000963 ORTHO05D005131 5.2e-10 68.2 49 67.3
VMungo0464G1437 Vigna mungo HOM05D000963 ORTHO05D005131 5.2e-10 68.2 49 67.3
VMungo1215G3364 Vigna mungo HOM05D001592 ORTHO05D001533 5.2e-10 68.2 49 67.3
Sopen08g004620 Solanum pennellii HOM05D001396 ORTHO05D000493 1.2e-09 67.0 39 79.5
arahy.Tifrunner.gnm1.ann1.9M10FC Arachis hypogaea HOM05D000940 ORTHO05D000782 1.5e-09 66.6 50 64.0
MELO3C027659.2 Cucumis melo HOM05D028556 ORTHO05D011791 3.4e-09 65.5 46 69.6
Gohir.A13G086560 Gossypium hirsutum HOM05D000963 ORTHO05D005131 3.4e-09 65.5 38 84.2
Ca_03776_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 4.4e-09 65.1 49 65.3
Ca_03777_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 4.4e-09 65.1 49 65.3
Cpa.g.sc389.2 Carica papaya HOM05D000963 ORTHO05D005131 5.7e-09 64.7 45 71.1
VMungo0720G2312 Vigna mungo HOM05D000963 ORTHO05D005131 7.5e-09 64.3 39 74.4
Gorai.002G152100 Gossypium raimondii HOM05D000963 ORTHO05D005131 9.8e-09 63.9 90 44.4
arahy.Tifrunner.gnm1.ann1.MJQ8WH Arachis hypogaea HOM05D000963 ORTHO05D011117 1.3e-08 63.5 59 54.2
SGA_v2.0_scaffold140G35502 Striga asiatica HOM05D000963 ORTHO05D005131 1.3e-08 63.5 49 61.2
Glyma.05G084600 Glycine max HOM05D000963 ORTHO05D005131 1.7e-08 63.2 39 74.4
Gohir.A09G101420 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.7e-08 63.2 37 81.1
Medtr3g035650 Medicago truncatula HOM05D000963 ORTHO05D005131 6.3e-08 61.2 39 76.9
CSS0000719 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D005131 1.4e-07 60.1 49 59.2
Medtr8g040260 Medicago truncatula HOM05D000963 ORTHO05D005131 1.4e-07 60.1 39 74.4
arahy.Tifrunner.gnm1.ann1.LAST4K Arachis hypogaea HOM05D000963 ORTHO05D005131 7.0e-07 57.8 49 57.1
EL10As15g24101 Beta vulgaris HOM05D014900 ORTHO05D018510 9.2e-07 57.4 33 81.8
CSS0044962 Camellia sinensis var. sinensis HOM05D014900 ORTHO05D011791 2.7e-06 55.8 68 50.0
Sopen11g020200 Solanum pennellii HOM05D000004 ORTHO05D000002 5.9e-06 54.7 34 73.5


User provided reference genes

Program Settings