Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.008G063500 Gossypium raimondii HOM05D005734 ORTHO05D006990 1.0e-70 270.0 143 100.0
Gohir.A12G060300 Gossypium hirsutum HOM05D005734 ORTHO05D006990 3.5e-50 201.8 112 96.4
Gohir.D12G060400 Gossypium hirsutum HOM05D005734 ORTHO05D006990 8.0e-47 190.7 135 78.5
Thecc.01G021200 Theobroma cacao HOM05D005734 ORTHO05D006990 7.2e-40 167.5 113 79.6
Duzib147G0754 Durio zibethinus HOM05D005734 ORTHO05D006990 6.1e-39 164.5 113 79.6
Gorai.003G010600 Gossypium raimondii HOM05D005734 ORTHO05D006990 6.1e-39 164.5 113 77.9
COL.COLO4_21933 Corchorus olitorius HOM05D005734 ORTHO05D006990 1.0e-38 163.7 113 77.9
Gohir.D03G010200 Gossypium hirsutum HOM05D005734 ORTHO05D006990 1.8e-38 162.9 113 77.0
Gohir.A02G169800 Gossypium hirsutum HOM05D005734 ORTHO05D006990 4.0e-38 161.8 113 77.9
Lalb_Chr16g0391171 Lupinus albus HOM05D005734 ORTHO05D006990 1.7e-33 146.4 113 68.1
Manes.02G102700 Manihot esculenta HOM05D005734 ORTHO05D006990 6.6e-33 144.4 115 66.1
Ca_24908_v3 Cicer arietinum L. HOM05D005734 ORTHO05D006990 1.1e-32 143.7 113 66.4
MELO3C016376.2 Cucumis melo HOM05D005734 ORTHO05D006990 1.9e-32 142.9 114 68.4
ClCG07G008420 Citrullus lanatus HOM05D005734 ORTHO05D006990 2.5e-32 142.5 114 66.7
Medtr5g021750 Medicago truncatula HOM05D005734 ORTHO05D006990 1.2e-31 140.2 113 64.6
TWI09G0878 Tripterygium wilfordii HOM05D005734 ORTHO05D006990 1.2e-31 140.2 113 65.5
Phvul.002G110400 Phaseolus vulgaris HOM05D005734 ORTHO05D006990 1.6e-31 139.8 113 66.4
VMungo1215G0268 Vigna mungo HOM05D005734 ORTHO05D006990 1.6e-31 139.8 113 67.3
Nitab4.5_0005721g0110 Nicotiana tabacum HOM05D005734 ORTHO05D006990 2.1e-31 139.4 113 67.3
CsaV3_4G005730 Cucumis sativus L. HOM05D005734 ORTHO05D006990 2.8e-31 139.0 114 66.7
Rhsim08G0034500 Rhododendron simsii HOM05D005734 ORTHO05D006990 2.8e-31 139.0 113 65.5
Glyma.11G075600 Glycine max HOM05D005734 ORTHO05D006990 3.6e-31 138.7 113 66.4
Peaxi162Scf00083g00086 Petunia axillaris HOM05D005734 ORTHO05D006990 6.1e-31 137.9 113 64.6
QL06p033653 Quercus lobata HOM05D005734 ORTHO05D006990 6.1e-31 137.9 113 63.7
Ciclev10026469m.g Citrus clementina HOM05D005734 ORTHO05D006990 1.4e-30 136.7 116 66.4
Glyma.01G167600 Glycine max HOM05D005734 ORTHO05D006990 1.4e-30 136.7 113 65.5
RcHm_v2.0_Chr2g0099641 Rosa chinensis HOM05D005734 ORTHO05D006990 1.4e-30 136.7 117 59.0
TWI73G0895 Tripterygium wilfordii HOM05D005734 ORTHO05D006990 1.4e-30 136.7 114 64.9
Cc07_g10570 Coffea canephora HOM05D005734 ORTHO05D006990 2.3e-30 136.0 113 67.3
FvH4_1g12000 Fragaria vesca HOM05D005734 ORTHO05D006990 2.3e-30 136.0 113 60.2
Sed0005630 Sechium edule HOM05D005734 ORTHO05D006990 2.3e-30 136.0 114 65.8
TAR376G0390 Trochodendron aralioides HOM05D005734 ORTHO05D006990 2.3e-30 136.0 113 64.6
FAN19G0086 Fragaria x ananassa HOM05D005734 ORTHO05D006990 3.0e-30 135.6 113 60.2
Eucgr.K02152 Eucalyptus grandis HOM05D005734 ORTHO05D006990 4.0e-30 135.2 113 66.4
Nitab4.5_0004254g0030 Nicotiana tabacum HOM05D005734 ORTHO05D006990 4.0e-30 135.2 113 65.5
Solyc02g084220.3 Solanum lycopersicum HOM05D005734 ORTHO05D006990 4.0e-30 135.2 113 65.5
Sopen02g028960 Solanum pennellii HOM05D005734 ORTHO05D006990 4.0e-30 135.2 113 65.5
TPR.G2344 Trifolium pratense HOM05D005734 ORTHO05D006990 4.0e-30 135.2 113 62.8
MD15G1247200 Malus domestica HOM05D005734 ORTHO05D006990 1.2e-29 133.7 113 62.8
arahy.Tifrunner.gnm1.ann1.GC558H Arachis hypogaea HOM05D005734 ORTHO05D006990 1.5e-29 133.3 113 64.6
Psat2g155360 Pisum sativum HOM05D005734 ORTHO05D006990 2.0e-29 132.9 113 63.7
Potri.007G014000 Populus trichocarpa HOM05D005734 ORTHO05D006990 2.0e-29 132.9 114 65.8
Sabra07G0011400 Salix brachista HOM05D005734 ORTHO05D006990 2.6e-29 132.5 114 67.5
Dinv33615 Davidia involucrata HOM05D005734 ORTHO05D006990 3.4e-29 132.1 113 63.7
Lj2C466G2 Lonicera japonica HOM05D005734 ORTHO05D006990 3.4e-29 132.1 113 66.4
Sabra05G0095300 Salix brachista HOM05D005734 ORTHO05D006990 3.4e-29 132.1 114 66.7
SalBow3G4629 Salvia bowleyana HOM05D005734 ORTHO05D006990 3.4e-29 132.1 113 61.9
CiPaw.08G133400 Carya illinoinensis HOM05D005734 ORTHO05D006990 4.4e-29 131.7 113 62.8
MSTRG.2698 Avicennia marina HOM05D005734 ORTHO05D006990 1.3e-28 130.2 113 66.4
Actinidia31004 Actinidia chinensis HOM05D005734 ORTHO05D006990 1.7e-28 129.8 113 65.5
AT5G66290 Arabidopsis thaliana HOM05D005734 ORTHO05D006990 1.7e-28 129.8 114 61.4
Carub.0008s2820 Capsella rubella HOM05D005734 ORTHO05D006990 1.7e-28 129.8 115 63.5
Thhalv10004735m.g Eutrema salsugineum HOM05D005734 ORTHO05D006990 1.7e-28 129.8 115 63.5
EL10Ac3g07303 Beta vulgaris HOM05D005734 ORTHO05D006990 2.9e-28 129.0 113 61.1
Lj2g0025294 Lotus japonicus HOM05D005734 ORTHO05D006990 2.9e-28 129.0 114 63.2
MD02G1134200 Malus domestica HOM05D005734 ORTHO05D006990 2.9e-28 129.0 113 60.2
Migut.H01144 Erythranthe guttata HOM05D005734 ORTHO05D006990 3.7e-28 128.6 113 62.8
Nn6g32291 Nelumbo nucifera HOM05D005734 ORTHO05D006990 3.7e-28 128.6 113 60.2
Potri.005G116300 Populus trichocarpa HOM05D005734 ORTHO05D006990 4.9e-28 128.3 114 64.0
Sp2g30330 Schrenkiella parvula HOM05D005734 ORTHO05D006990 6.4e-28 127.9 116 62.9
AL8G45230 Arabidopsis lyrata HOM05D005734 ORTHO05D006990 1.8e-27 126.3 115 61.7
Aa31LG1G14770 Aethionema arabicum HOM05D005734 ORTHO05D006990 2.4e-27 125.9 115 60.9
CSS0031169 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 4.1e-27 125.2 113 62.8
Ah.03g141620 Amaranthus hybridus HOM05D005734 ORTHO05D006990 5.4e-27 124.8 117 59.8
PSO170G3799 Papaver somniferum HOM05D005734 ORTHO05D006990 7.0e-27 124.4 114 61.4
THA.LOC104819182 Tarenaya hassleriana HOM05D005734 ORTHO05D006990 7.0e-27 124.4 115 60.9
PSO210G7806 Papaver somniferum HOM05D005734 ORTHO05D006990 1.2e-26 123.6 114 60.5
TAR628G0339 Trochodendron aralioides HOM05D005734 ORTHO05D006990 1.2e-26 123.6 113 60.2
DCAR_017347 Daucus carota HOM05D005734 ORTHO05D006990 1.6e-26 123.2 113 60.2
PGSC0003DMG400003554 Solanum tuberosum HOM05D005734 ORTHO05D006990 3.5e-26 122.1 139 53.2
Lsat_1_v5_gn_3_73980 Lactuca sativa HOM05D005734 ORTHO05D006990 4.6e-26 121.7 113 59.3
FAN28G1963 Fragaria x ananassa HOM05D005734 ORTHO05D006990 6.0e-26 121.3 119 53.8
BcaNung04509 Brassica carinata HOM05D005734 ORTHO05D006990 6.6e-25 117.9 119 59.7
A07p17570 Brassica napus HOM05D005734 ORTHO05D006990 8.6e-25 117.5 118 59.3
Hund14038 Selenicereus undatus HOM05D005734 ORTHO05D006990 1.9e-24 116.3 155 47.1
BcaC04g23120 Brassica carinata HOM05D005734 ORTHO05D006990 3.3e-24 115.5 118 60.2
BcaC04g23124 Brassica carinata HOM05D005734 ORTHO05D006990 3.3e-24 115.5 118 60.2
BcaC06g34694 Brassica carinata HOM05D005734 ORTHO05D006990 3.3e-24 115.5 119 58.0
BcaNung05273 Brassica carinata HOM05D005734 ORTHO05D006990 3.3e-24 115.5 118 60.2
C07p25530 Brassica napus HOM05D005734 ORTHO05D006990 3.3e-24 115.5 119 58.0
BolC7t43073H Brassica oleracea HOM05D005734 ORTHO05D006990 3.3e-24 115.5 119 58.0
MBI05_g26512_MAGBIO Magnolia biondii HOM05D005734 ORTHO05D006990 3.3e-24 115.5 108 60.2
Cpa.g.sc6.229 Carica papaya HOM05D005734 ORTHO05D006990 5.6e-24 114.8 116 58.6
BcaB02g10036 Brassica carinata HOM05D005734 ORTHO05D006990 9.5e-24 114.0 119 57.1
C09p11890 Brassica napus HOM05D005734 ORTHO05D006990 3.6e-23 112.1 100 63.0
BolC9t54077H Brassica oleracea HOM05D005734 ORTHO05D006990 3.6e-23 112.1 100 63.0
GSVIVG01018804001 Vitis vinifera HOM05D005734 ORTHO05D006990 4.7e-23 111.7 113 58.4
HanXRQChr16g0531031 Helianthus annuus HOM05D005734 ORTHO05D006990 2.3e-22 109.4 117 59.0
Aqoxy4G02678 Aquilegia oxysepala HOM05D005734 ORTHO05D006990 6.8e-22 107.8 102 55.9
ECA246G4348 Erigeron canadensis HOM05D000013 ORTHO05D000011 6.8e-22 107.8 118 57.6
Medtr5g021780 Medicago truncatula HOM05D005734 ORTHO05D006990 1.5e-21 106.7 88 61.4
Aqoxy4G02673 Aquilegia oxysepala HOM05D005734 ORTHO05D006990 2.0e-21 106.3 102 54.9
ATR0147G004 Amborella trichopoda HOM05D005734 ORTHO05D006990 5.8e-21 104.8 113 52.2
unitig_699.g19712 Utricularia gibba HOM05D005734 ORTHO05D006990 1.3e-20 103.6 114 52.6
FAN23G1819 Fragaria x ananassa HOM05D005734 ORTHO05D006990 1.7e-20 103.2 118 52.5
HPP92_018404 Vanilla planifolia HOM05D005734 ORTHO05D006990 1.7e-20 103.2 118 50.0
RcHm_v2.0_Chr1g0353231 Rosa chinensis HOM05D005734 ORTHO05D006990 1.9e-19 99.8 118 50.0
Lsat_1_v5_gn_4_38760 Lactuca sativa HOM05D005734 ORTHO05D006990 4.1e-19 98.6 113 49.6
Lsat_1_v5_gn_4_152781 Lactuca sativa HOM05D005734 ORTHO05D006990 5.4e-19 98.2 104 48.1
RcHm_v2.0_Chr0c39g0503221 Rosa chinensis HOM05D005734 ORTHO05D006990 7.0e-19 97.8 96 54.2
FAN26G0019 Fragaria x ananassa HOM05D005734 ORTHO05D006990 9.2e-19 97.4 113 48.7
RcHm_v2.0_Chr5g0080231 Rosa chinensis HOM05D005734 ORTHO05D006990 9.2e-19 97.4 87 57.5
HanXRQChr15g0482851 Helianthus annuus HOM05D005734 ORTHO05D006990 2.1e-18 96.3 117 50.4
Nn5g29268 Nelumbo nucifera HOM05D005734 ORTHO05D006990 2.1e-18 96.3 114 50.9
Lj2A474G36 Lonicera japonica HOM05D005734 ORTHO05D006990 3.0e-17 92.4 147 42.9
A09p10030 Brassica napus HOM05D005734 ORTHO05D006990 3.9e-17 92.0 116 50.9
CARHR281420 Cardamine hirsuta HOM05D005734 ORTHO05D006990 6.6e-17 91.3 71 64.8
Prupe.7G166600 Prunus persica HOM05D005734 ORTHO05D006990 8.6e-17 90.9 113 51.3
Os03g0727100 Oryza sativa ssp. japonica HOM05D005734 ORTHO05D006990 5.6e-16 88.2 126 46.8
CSS0012385 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 1.2e-15 87.0 71 69.0
CSS0021905 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 1.2e-15 87.0 71 69.0
Sc16g0002040 Simmondsia chinensis HOM05D005734 ORTHO05D006990 1.2e-15 87.0 71 64.8
Zm00001eb055930 Zea mays HOM05D005734 ORTHO05D006990 2.1e-15 86.3 125 44.8
Mapoly0166s0009 Marchantia polymorpha HOM05D005734 ORTHO05D006990 3.1e-14 82.4 96 47.9
CDE05G1720 Ceratophyllum demersum HOM05D005734 ORTHO05D006990 3.4e-13 79.0 118 44.9
vmacro18422 Vaccinium macrocarpon HOM05D005734 ORTHO05D006990 7.5e-13 77.8 159 40.3
Atru.chr3.782 Acer truncatum HOM05D005734 ORTHO05D006990 2.7e-10 69.3 87 47.1
Pp3c14_25740 Physcomitrium patens HOM05D005734 ORTHO05D006990 6.0e-10 68.2 118 35.6
arahy.Tifrunner.gnm1.ann1.DFQ3ES Arachis hypogaea HOM05D005734 ORTHO05D006990 1.0e-09 67.4 42 76.2
AagrBONN_evm.TU.Sc2ySwM_117.481 Anthoceros agrestis HOM05D005734 ORTHO05D006990 2.3e-09 66.2 116 35.3
Cfa006957 Carpinus fangiana HOM05D005734 ORTHO05D006990 3.9e-09 65.5 47 70.2
QL06p033647 Quercus lobata HOM05D005734 ORTHO05D006990 3.9e-09 65.5 42 73.8
Haze_03794 Corylus avellana HOM05D005734 ORTHO05D006990 5.1e-09 65.1 42 76.2
SGA_v2.0_scaffold137G35098 Striga asiatica HOM05D005734 ORTHO05D006990 4.3e-08 62.0 42 73.8
ATR0876G001 Amborella trichopoda HOM05D005734 ORTHO05D006990 6.2e-07 58.2 42 59.5
AUR62018084 Chenopodium quinoa HOM05D005734 ORTHO05D006990 8.1e-07 57.8 42 64.3


User provided reference genes

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