Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.008G048900 Gossypium raimondii HOM05D006944 ORTHO05D013071 1.9e-45 186.0 135 100.0
Gohir.D12G046200 Gossypium hirsutum HOM05D006944 ORTHO05D013071 1.9e-42 176.0 135 95.6
Gorai.008G048800 Gossypium raimondii HOM05D006944 ORTHO05D013071 1.9e-42 176.0 135 95.6
Gohir.A12G047500 Gossypium hirsutum HOM05D006944 ORTHO05D013071 9.5e-42 173.7 135 95.6
Gohir.A12G047400 Gossypium hirsutum HOM05D006944 ORTHO05D013071 8.9e-40 167.2 135 93.3
Duzib132G0178 Durio zibethinus HOM05D006944 ORTHO05D013071 1.1e-29 133.7 128 78.9
Thecc.02G007800 Theobroma cacao HOM05D006944 ORTHO05D013071 5.1e-27 124.8 133 75.9
Duzib052G0351 Durio zibethinus HOM05D006944 ORTHO05D013071 1.4e-24 116.7 123 59.3
COL.COLO4_17646 Corchorus olitorius HOM05D006944 ORTHO05D013071 5.8e-23 111.3 135 71.1
Thecc.01G139600 Theobroma cacao HOM05D006944 ORTHO05D013071 4.2e-21 105.1 132 67.4
Thecc.02G007200 Theobroma cacao HOM05D006944 ORTHO05D013071 6.0e-20 101.3 135 63.7
Thecc.01G140100 Theobroma cacao HOM05D006944 ORTHO05D013071 7.9e-20 100.9 129 67.4
Thecc.02G007400 Theobroma cacao HOM05D006944 ORTHO05D013071 3.0e-19 99.0 135 65.2
Thecc.02G007600 Theobroma cacao HOM05D006944 ORTHO05D013071 3.9e-19 98.6 135 61.5
Duzib132G0544 Durio zibethinus HOM05D006944 ORTHO05D013071 1.9e-18 96.3 130 66.9
Gohir.A03G217500 Gossypium hirsutum HOM05D006944 ORTHO05D036044 7.4e-18 94.4 134 47.8
Duzib187G1015 Durio zibethinus HOM05D006944 ORTHO05D013071 8.1e-17 90.9 132 55.3
Gohir.D02G239400 Gossypium hirsutum HOM05D006944 ORTHO05D036044 4.0e-16 88.6 136 51.5
Gorai.005G267800 Gossypium raimondii HOM05D006944 ORTHO05D036044 1.5e-15 86.7 132 45.5
Gorai.005G267700 Gossypium raimondii HOM05D006944 ORTHO05D009910 4.5e-15 85.1 132 51.5
Thecc.02G007500 Theobroma cacao HOM05D006944 ORTHO05D013071 1.4e-13 80.1 135 50.4
Gohir.D02G239500 Gossypium hirsutum HOM05D006944 ORTHO05D009910 2.4e-13 79.3 103 47.6
COL.COLO4_12073 Corchorus olitorius HOM05D006944 ORTHO05D013071 3.2e-13 79.0 129 61.2
Duzib187G0303 Durio zibethinus HOM05D006944 ORTHO05D013071 7.9e-12 74.3 132 60.6
Thecc.07G173400 Theobroma cacao HOM05D006944 ORTHO05D009910 1.8e-11 73.2 127 37.0
Thecc.07G173000 Theobroma cacao HOM05D006944 ORTHO05D009910 2.3e-11 72.8 118 50.8
COL.COLO4_12078 Corchorus olitorius HOM05D006944 ORTHO05D009910 4.3e-10 68.6 120 52.5
Thecc.07G172800 Theobroma cacao HOM05D006944 ORTHO05D009910 4.3e-10 68.6 111 40.5
Duzib211G0488 Durio zibethinus HOM05D006944 ORTHO05D009910 9.6e-10 67.4 53 60.4
Duzib138G0371 Durio zibethinus HOM05D011192 ORTHO05D015638 2.1e-09 66.2 115 43.5
Thecc.K0001700 Theobroma cacao HOM05D006944 ORTHO05D009910 2.8e-09 65.9 118 38.1
Duzib187G0900 Durio zibethinus HOM05D006944 ORTHO05D009910 6.2e-09 64.7 132 44.7
Gohir.A01G097900 Gossypium hirsutum HOM05D006944 ORTHO05D009910 1.4e-08 63.5 56 58.9
Gohir.D01G082400 Gossypium hirsutum HOM05D006944 ORTHO05D009910 1.8e-08 63.2 56 58.9
Gorai.002G107800 Gossypium raimondii HOM05D006944 ORTHO05D009910 1.8e-08 63.2 56 58.9
Thecc.02G266200 Theobroma cacao HOM05D011192 ORTHO05D015638 4.0e-08 62.0 115 36.5
Thecc.07G164100 Theobroma cacao HOM05D006944 ORTHO05D045182 4.0e-08 62.0 58 55.2
COL.COLO4_32287 Corchorus olitorius HOM05D006944 ORTHO05D009910 5.3e-08 61.6 55 54.5
Gohir.A13G124500 Gossypium hirsutum HOM05D006944 ORTHO05D009910 5.3e-08 61.6 93 38.7
Thecc.07G175700 Theobroma cacao HOM05D006944 ORTHO05D009910 6.9e-08 61.2 55 56.4
Duzib213G0885 Durio zibethinus HOM05D006944 ORTHO05D186234 9.0e-08 60.8 56 57.1
Gohir.A08G232200 Gossypium hirsutum HOM05D006944 ORTHO05D009910 9.0e-08 60.8 106 36.8
Gohir.A13G125001 Gossypium hirsutum HOM05D006944 ORTHO05D009910 9.0e-08 60.8 131 40.5
Thecc.05G142700 Theobroma cacao HOM05D006944 ORTHO05D009910 1.2e-07 60.5 123 33.3
Duzib213G0640 Durio zibethinus HOM05D006944 ORTHO05D009910 3.4e-07 58.9 136 34.6
COL.COLO4_23516 Corchorus olitorius HOM05D029339 ORTHO05D009910 4.5e-07 58.5 117 56.4
Gorai.004G269200 Gossypium raimondii HOM05D006944 ORTHO05D009910 4.5e-07 58.5 93 38.7
Thecc.07G175300 Theobroma cacao HOM05D006944 ORTHO05D009910 7.6e-07 57.8 56 51.8
Gohir.A08G232050 Gossypium hirsutum HOM05D006944 ORTHO05D009910 1.0e-06 57.4 92 40.2
Thecc.05G142800 Theobroma cacao HOM05D006944 ORTHO05D035085 1.0e-06 57.4 122 43.4
COL.COLO4_32292 Corchorus olitorius HOM05D006944 ORTHO05D009910 1.3e-06 57.0 50 52.0
Duzib268G0495 Durio zibethinus HOM05D006944 ORTHO05D009910 1.3e-06 57.0 55 52.7
Duzib213G0468 Durio zibethinus HOM05D006944 ORTHO05D009910 1.7e-06 56.6 105 39.0
COL.COLO4_32290 Corchorus olitorius HOM05D006944 ORTHO05D009910 2.2e-06 56.2 50 54.0
Duzib268G0833 Durio zibethinus HOM05D006944 ORTHO05D009910 2.2e-06 56.2 53 52.8
Gohir.A07G203400 Gossypium hirsutum HOM05D011192 ORTHO05D015638 2.2e-06 56.2 127 35.4
Gohir.D13G128600 Gossypium hirsutum HOM05D006944 ORTHO05D046837 2.2e-06 56.2 129 38.8
Gorai.001G236700 Gossypium raimondii HOM05D011192 ORTHO05D015638 2.2e-06 56.2 92 39.1
Gorai.013G144700 Gossypium raimondii HOM05D006944 ORTHO05D046837 2.2e-06 56.2 129 38.8
COL.COLO4_23522 Corchorus olitorius HOM05D029339 ORTHO05D009910 3.8e-06 55.5 117 57.3
COL.COLO4_32294 Corchorus olitorius HOM05D006944 ORTHO05D009910 4.9e-06 55.1 50 58.0
Gohir.D07G209600 Gossypium hirsutum HOM05D011192 ORTHO05D015638 4.9e-06 55.1 100 38.0
Gohir.A01G098001 Gossypium hirsutum HOM05D006944 ORTHO05D009910 6.5e-06 54.7 55 50.9
Gohir.A08G232100 Gossypium hirsutum HOM05D006944 ORTHO05D009910 6.5e-06 54.7 49 61.2
Gohir.D01G082600 Gossypium hirsutum HOM05D006944 ORTHO05D009910 6.5e-06 54.7 55 50.9
Gorai.001G236600 Gossypium raimondii HOM05D011192 ORTHO05D015638 6.5e-06 54.7 127 34.6
Duzib128G1583 Durio zibethinus HOM05D006944 ORTHO05D009910 8.4e-06 54.3 53 49.1
Gohir.A07G203500 Gossypium hirsutum HOM05D011192 ORTHO05D015638 8.4e-06 54.3 92 38.0
Gohir.D07G209633 Gossypium hirsutum HOM05D011192 ORTHO05D015638 8.4e-06 54.3 103 37.9
Gorai.001G236800 Gossypium raimondii HOM05D011192 ORTHO05D015638 8.4e-06 54.3 103 37.9
Gorai.002G108000 Gossypium raimondii HOM05D006944 ORTHO05D009910 8.4e-06 54.3 55 49.1


User provided reference genes

Program Settings