Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.007G333400 Gossypium raimondii HOM05D007085 ORTHO05D008828 1.2e-111 407.1 325 100.0
Gorai.007G334700 Gossypium raimondii HOM05D007085 ORTHO05D008828 4.4e-77 292.4 413 70.7
Gorai.007G334300 Gossypium raimondii HOM05D007085 ORTHO05D008828 4.1e-75 285.8 413 70.0
Gohir.A11G290600 Gossypium hirsutum HOM05D007085 ORTHO05D008828 5.4e-75 285.4 413 69.7
Gorai.007G332700 Gossypium raimondii HOM05D007085 ORTHO05D008828 7.1e-75 285.0 413 70.0
Gorai.007G334000 Gossypium raimondii HOM05D007085 ORTHO05D008828 2.5e-72 276.6 413 69.2
Gohir.D11G302200 Gossypium hirsutum HOM05D007085 ORTHO05D008828 2.3e-65 253.4 179 74.3
COL.COLO4_17436 Corchorus olitorius HOM05D007085 ORTHO05D008828 1.4e-46 191.0 180 59.4
Duzib268G0775 Durio zibethinus HOM05D007085 ORTHO05D008828 9.0e-46 188.3 179 58.7
Thecc.07G142300 Theobroma cacao HOM05D007085 ORTHO05D008828 2.6e-45 186.8 179 59.8
Manes.01G152600 Manihot esculenta HOM05D007085 ORTHO05D008828 1.2e-26 124.8 223 35.9
Gorai.007G333000 Gossypium raimondii HOM05D007085 ORTHO05D008828 3.6e-26 123.2 56 100.0
Ciclev10020422m.g Citrus clementina HOM05D007085 ORTHO05D008828 6.1e-26 122.5 191 39.3
CSS0001065 Camellia sinensis var. sinensis HOM05D007085 ORTHO05D008828 1.4e-25 121.3 394 52.8
vmacro09426 Vaccinium macrocarpon HOM05D007085 ORTHO05D008828 1.4e-25 121.3 416 50.5
Potri.001G379500 Populus trichocarpa HOM05D007085 ORTHO05D008828 1.1e-24 118.2 180 38.9
Gohir.D11G302000 Gossypium hirsutum HOM05D007085 ORTHO05D008828 3.3e-24 116.7 55 96.4
Sabra16G0250000 Salix brachista HOM05D007085 ORTHO05D008828 4.4e-24 116.3 156 41.7
Hma1.2p1_0587F.1_g184339 Hydrangea macrophylla HOM05D007085 ORTHO05D008828 1.3e-23 114.8 182 39.0
Hma1.2p1_0587F.1_g184370 Hydrangea macrophylla HOM05D007085 ORTHO05D008828 1.3e-23 114.8 182 39.0
Dinv13328 Davidia involucrata HOM05D007085 ORTHO05D008828 2.2e-23 114.0 252 33.7
Cpa.g.sc2050.1 Carica papaya HOM05D007085 ORTHO05D008828 2.8e-23 113.6 217 33.6
TWI60G0193 Tripterygium wilfordii HOM05D007085 ORTHO05D008828 1.1e-22 111.7 144 42.4
Lj8P143T18 Lonicera japonica HOM05D007085 ORTHO05D008828 1.8e-22 110.9 370 54.9
Actinidia00869 Actinidia chinensis HOM05D007085 ORTHO05D008828 2.4e-22 110.5 181 39.8
Haze_08476 Corylus avellana HOM05D007085 ORTHO05D008828 6.9e-22 109.0 252 33.7
QL04p068992 Quercus lobata HOM05D007085 ORTHO05D008828 1.2e-21 108.2 199 35.7
RcHm_v2.0_Chr5g0028281 Rosa chinensis HOM05D007085 ORTHO05D008828 1.2e-21 108.2 138 40.6
TAR627G0225 Trochodendron aralioides HOM05D007085 ORTHO05D008828 1.2e-21 108.2 192 35.9
Actinidia03646 Actinidia chinensis HOM05D007085 ORTHO05D008828 2.6e-21 107.1 182 37.4
PGR031G3190 Punica granatum HOM05D007085 ORTHO05D008828 4.5e-21 106.3 205 32.7
Cfa019473 Carpinus fangiana HOM05D007085 ORTHO05D008828 5.9e-21 105.9 251 31.9
Peaxi162Scf00573g00042 Petunia axillaris HOM05D007085 ORTHO05D008828 1.0e-20 105.1 377 52.0
THA.LOC104822596 Tarenaya hassleriana HOM05D007085 ORTHO05D008828 1.3e-20 104.8 125 43.2
CiPaw.12G046300 Carya illinoinensis HOM05D007085 ORTHO05D008828 2.2e-20 104.0 255 33.3
SalBow8G4060 Salvia bowleyana HOM05D007085 ORTHO05D008828 2.2e-20 104.0 373 51.2
FvH4_3g16970 Fragaria vesca HOM05D007085 ORTHO05D008828 2.9e-20 103.6 159 38.4
FAN11G1303 Fragaria x ananassa HOM05D007085 ORTHO05D008828 2.9e-20 103.6 159 38.4
Prupe.4G152100 Prunus persica HOM05D007085 ORTHO05D008828 2.9e-20 103.6 163 36.8
Eucgr.F03214 Eucalyptus grandis HOM05D007085 ORTHO05D008828 3.8e-20 103.2 220 31.8
FAN16G1935 Fragaria x ananassa HOM05D007085 ORTHO05D008828 3.8e-20 103.2 147 40.1
Lsat_1_v5_gn_9_101401 Lactuca sativa HOM05D007085 ORTHO05D008828 3.8e-20 103.2 194 32.5
MD11G1276100 Malus domestica HOM05D007085 ORTHO05D008828 6.5e-20 102.4 168 36.3
CANSAT56G2932 Cannabis sativa HOM05D007085 ORTHO05D008828 8.5e-20 102.1 181 33.1
DCAR_021048 Daucus carota HOM05D007085 ORTHO05D008828 1.9e-19 100.9 192 32.3
Nitab4.5_0000923g0040 Nicotiana tabacum HOM05D000021 ORTHO05D008828 1.9e-19 100.9 158 34.8
PSO063G4137 Papaver somniferum HOM05D007085 ORTHO05D008828 1.9e-19 100.9 152 38.2
RhsimUnG0205600 Rhododendron simsii HOM05D007085 ORTHO05D008828 1.9e-19 100.9 185 35.1
Sed0002576 Sechium edule HOM05D007085 ORTHO05D008828 1.9e-19 100.9 230 30.0
Carub.0003s1428 Capsella rubella HOM05D007085 ORTHO05D008828 3.2e-19 100.1 246 31.7
Cc05_g10440 Coffea canephora HOM05D007085 ORTHO05D008828 3.2e-19 100.1 251 30.7
SHI27645 Sapria himalayana HOM05D007085 ORTHO05D008828 3.2e-19 100.1 192 32.3
BraA05t22296Z Brassica rapa HOM05D007085 ORTHO05D008828 4.2e-19 99.8 126 40.5
A05p34840 Brassica napus HOM05D007085 ORTHO05D008828 5.5e-19 99.4 151 38.4
ClCG11G016990 Citrullus lanatus HOM05D007085 ORTHO05D008828 5.5e-19 99.4 372 52.2
Thhalv10020856m.g Eutrema salsugineum HOM05D007085 ORTHO05D008828 7.2e-19 99.0 131 38.9
Aqoxy2G00336 Aquilegia oxysepala HOM05D007085 ORTHO05D008828 9.4e-19 98.6 195 29.7
BcaC05g29059 Brassica carinata HOM05D007085 ORTHO05D008828 1.2e-18 98.2 154 37.0
C05p52690 Brassica napus HOM05D007085 ORTHO05D008828 1.2e-18 98.2 154 37.0
BolC5t33948H Brassica oleracea HOM05D007085 ORTHO05D008828 1.6e-18 97.8 150 37.3
CARHR089540 Cardamine hirsuta HOM05D007085 ORTHO05D008828 2.7e-18 97.1 253 30.0
Sp3g12850 Schrenkiella parvula HOM05D007085 ORTHO05D008828 2.7e-18 97.1 163 34.4
PGSC0003DMG400044445 Solanum tuberosum HOM05D007085 ORTHO05D008828 2.7e-18 97.1 336 53.6
PGSC0003DMG402021252 Solanum tuberosum HOM05D007085 ORTHO05D008828 2.7e-18 97.1 336 53.6
AL3G26910 Arabidopsis lyrata HOM05D007085 ORTHO05D008828 4.7e-18 96.3 249 30.9
MELO3C025593.2 Cucumis melo HOM05D007085 ORTHO05D008828 4.7e-18 96.3 388 50.0
Nn3g20730 Nelumbo nucifera HOM05D007085 ORTHO05D008828 6.1e-18 95.9 193 31.1
Nitab4.5_0009310g0040 Nicotiana tabacum HOM05D007085 ORTHO05D008828 6.1e-18 95.9 331 47.4
AT3G14580 Arabidopsis thaliana HOM05D007085 ORTHO05D008828 1.0e-17 95.1 182 34.1
EL10Ac4g08466 Beta vulgaris HOM05D007085 ORTHO05D008828 1.0e-17 95.1 193 31.6
Sc03g0010930 Simmondsia chinensis HOM05D007085 ORTHO05D008828 1.4e-17 94.7 154 36.4
CAN.G4458.1 Capsicum annuum HOM05D007085 ORTHO05D008828 2.3e-17 94.0 120 37.5
CAN.G904.26 Capsicum annuum HOM05D007085 ORTHO05D008828 2.3e-17 94.0 120 37.5
CAN.G904.38 Capsicum annuum HOM05D007085 ORTHO05D008828 2.3e-17 94.0 120 37.5
BcaB06g25373 Brassica carinata HOM05D007085 ORTHO05D008828 3.0e-17 93.6 152 35.5
Oeu009876.3 Olea europaea HOM05D007085 ORTHO05D008828 3.0e-17 93.6 215 30.7
Aa31LG8G1790 Aethionema arabicum HOM05D000230 ORTHO05D000176 3.9e-17 93.2 192 30.7
SGA_v2.0_scaffold34G13702 Striga asiatica HOM05D007085 ORTHO05D008828 6.7e-17 92.4 243 28.8
CDE04G0400 Ceratophyllum demersum HOM05D007085 ORTHO05D008828 8.8e-17 92.0 124 37.1
Migut.M00624 Erythranthe guttata HOM05D007085 ORTHO05D008828 8.8e-17 92.0 170 33.5
MBI07_g26363_MAGBIO Magnolia biondii HOM05D007085 ORTHO05D008828 8.8e-17 92.0 143 39.2
CsaV3_4G032620 Cucumis sativus L. HOM05D007085 ORTHO05D008828 1.5e-16 91.3 365 51.2
ECA240G0168 Erigeron canadensis HOM05D007085 ORTHO05D008828 1.5e-16 91.3 120 37.5
Solyc10g007520.3 Solanum lycopersicum HOM05D007085 ORTHO05D008828 2.0e-16 90.9 123 35.0
Sopen10g003460 Solanum pennellii HOM05D007085 ORTHO05D008828 2.0e-16 90.9 123 35.0
Ah.04g163870 Amaranthus hybridus HOM05D007085 ORTHO05D008828 1.3e-15 88.2 224 29.0
ATR0605G112 Amborella trichopoda HOM05D007085 ORTHO05D008828 3.1e-14 83.6 124 37.1
HPP92_011319 Vanilla planifolia HOM05D007085 ORTHO05D008828 4.1e-14 83.2 140 32.9
Zm00001eb431040 Zea mays HOM05D007085 ORTHO05D008828 2.0e-13 80.9 192 26.6
Os04g0618050 Oryza sativa ssp. japonica HOM05D007085 ORTHO05D008828 2.2e-12 77.4 122 30.3
SEGI_39798 Sequoiadendron giganteum HOM05D007085 ORTHO05D008828 1.1e-11 75.1 122 33.6
CSS0000578 Camellia sinensis var. sinensis HOM05D007085 ORTHO05D008828 4.7e-10 69.7 192 83.3
VMungo1080G1467 Vigna mungo HOM05D007085 ORTHO05D008828 6.1e-10 69.3 158 28.5
Lj3g0005838 Lotus japonicus HOM05D007085 ORTHO05D008828 6.7e-09 65.9 123 30.9
TPR.G29685 Trifolium pratense HOM05D007085 ORTHO05D008828 1.2e-08 65.1 87 35.6
Medtr2g072170 Medicago truncatula HOM05D007085 ORTHO05D008828 3.3e-08 63.5 178 27.0
Phvul.002G044000 Phaseolus vulgaris HOM05D007085 ORTHO05D008828 3.3e-08 63.5 94 39.4
Glyma.15G245700 Glycine max HOM05D007085 ORTHO05D008828 7.5e-08 62.4 108 33.3
Psat1g009200 Pisum sativum HOM05D007085 ORTHO05D008828 2.8e-07 60.5 92 33.7
Oeu006142.1 Olea europaea HOM05D007085 ORTHO05D008828 6.3e-07 59.3 191 56.0
arahy.Tifrunner.gnm1.ann1.L57236 Arachis hypogaea HOM05D007085 ORTHO05D008828 3.1e-06 57.0 125 28.0
arahy.Tifrunner.gnm1.ann1.10LGU9 Arachis hypogaea HOM05D007085 ORTHO05D008828 4.1e-06 56.6 123 27.6
Lalb_Chr25g0285531 Lupinus albus HOM05D007085 ORTHO05D008828 7.0e-06 55.8 43 51.2


User provided reference genes

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