Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.007G289600 Gossypium raimondii HOM05D004673 ORTHO05D005596 7.5e-166 588.2 627 100.0
Gohir.A11G259500 Gossypium hirsutum HOM05D004673 ORTHO05D005596 7.5e-73 279.3 766 62.4
COL.COLO4_13599 Corchorus olitorius HOM05D004673 ORTHO05D005596 2.8e-43 181.0 202 78.7
Thecc.05G294400 Theobroma cacao HOM05D004673 ORTHO05D005596 1.8e-42 178.3 199 78.4
Prupe.7G003900 Prunus persica HOM05D004673 ORTHO05D005596 1.2e-33 149.1 327 63.0
Ciclev10024612m.g Citrus clementina HOM05D004673 ORTHO05D005596 6.4e-32 143.3 327 62.4
Aqoxy1G00488 Aquilegia oxysepala HOM05D004673 ORTHO05D005596 4.2e-31 140.6 300 61.7
AUR62032055 Chenopodium quinoa HOM05D004673 ORTHO05D005596 7.1e-31 139.8 321 57.0
Nitab4.5_0000551g0010 Nicotiana tabacum HOM05D004673 ORTHO05D005596 7.1e-31 139.8 323 59.1
TAR623G1034 Trochodendron aralioides HOM05D004673 ORTHO05D005596 6.0e-30 136.7 203 69.5
QL01p003771 Quercus lobata HOM05D004673 ORTHO05D005596 1.0e-29 136.0 307 61.6
Carub.0006s3213 Capsella rubella HOM05D004673 ORTHO05D005596 1.3e-29 135.6 338 54.1
EL10Ac3g06819 Beta vulgaris HOM05D004673 ORTHO05D005596 1.1e-28 132.5 317 54.6
Nitab4.5_0006195g0010 Nicotiana tabacum HOM05D004673 ORTHO05D005596 1.1e-28 132.5 324 59.0
Cc01_g00160 Coffea canephora HOM05D004673 ORTHO05D005596 4.3e-28 130.6 330 56.4
Potri.001G003200 Populus trichocarpa HOM05D004673 ORTHO05D005596 5.6e-28 130.2 203 65.5
BcaB04g19351 Brassica carinata HOM05D004673 ORTHO05D005596 9.6e-28 129.4 322 59.0
C03p40670 Brassica napus HOM05D004673 ORTHO05D005596 9.6e-28 129.4 322 59.0
BolC3t16332H Brassica oleracea HOM05D004673 ORTHO05D005596 9.6e-28 129.4 322 59.0
Sp3g02900 Schrenkiella parvula HOM05D004673 ORTHO05D005596 1.6e-27 128.6 301 63.1
ClCG03G014570 Citrullus lanatus HOM05D004673 ORTHO05D005596 3.6e-27 127.5 326 55.8
TWI60G0809 Tripterygium wilfordii HOM05D004673 ORTHO05D005596 3.6e-27 127.5 201 66.7
Sabra01G0002300 Salix brachista HOM05D004673 ORTHO05D005596 1.4e-26 125.6 321 55.8
Carub.0003s0318 Capsella rubella HOM05D004673 ORTHO05D005596 4.0e-26 124.0 295 58.3
QL01p003522 Quercus lobata HOM05D000182 ORTHO05D005596 6.9e-26 123.2 325 55.7
Lsat_1_v5_gn_1_25861 Lactuca sativa HOM05D004673 ORTHO05D005596 9.0e-26 122.9 332 57.2
Atru.chr1.2923 Acer truncatum HOM05D004673 ORTHO05D005596 1.5e-25 122.1 324 55.2
CSS0005892 Camellia sinensis var. sinensis HOM05D004673 ORTHO05D005596 2.6e-25 121.3 201 67.2
Manes.03G086906 Manihot esculenta HOM05D004673 ORTHO05D005596 9.9e-25 119.4 200 66.5
Sed0024334 Sechium edule HOM05D004673 ORTHO05D005596 2.9e-24 117.9 203 62.6
Peaxi162Scf00705g00063 Petunia axillaris HOM05D004673 ORTHO05D005596 3.8e-24 117.5 323 56.0
CARHR253220 Cardamine hirsuta HOM05D004673 ORTHO05D005596 4.9e-24 117.1 326 56.7
DCAR_030114 Daucus carota HOM05D004673 ORTHO05D005596 7.1e-23 113.2 337 51.3
Rhsim13G0233200 Rhododendron simsii HOM05D004673 ORTHO05D005596 1.6e-22 112.1 201 63.7
QL02p095991 Quercus lobata HOM05D004673 ORTHO05D005596 2.1e-22 111.7 202 61.9
Actinidia00906 Actinidia chinensis HOM05D004673 ORTHO05D005596 2.7e-22 111.3 201 49.8
Cfa009556 Carpinus fangiana HOM05D004673 ORTHO05D005596 2.7e-22 111.3 199 62.3
MELO3C015573.2 Cucumis melo HOM05D004673 ORTHO05D005596 2.7e-22 111.3 337 48.1
DCAR_030099 Daucus carota HOM05D004673 ORTHO05D005596 3.5e-22 110.9 286 43.7
Dinv00554 Davidia involucrata HOM05D004673 ORTHO05D005596 3.5e-22 110.9 198 64.1
ECA233G4672 Erigeron canadensis HOM05D004673 ORTHO05D005596 4.6e-22 110.5 205 64.9
HanXRQChr07g0187111 Helianthus annuus HOM05D004673 ORTHO05D005596 6.0e-22 110.2 339 55.5
QL02p096023 Quercus lobata HOM05D004673 ORTHO05D005596 6.0e-22 110.2 202 60.9
Dinv09263 Davidia involucrata HOM05D004673 ORTHO05D005596 1.0e-21 109.4 199 64.3
Lsat_1_v5_gn_6_55581 Lactuca sativa HOM05D004673 ORTHO05D005596 1.0e-21 109.4 198 65.2
Aa31LG5G14520 Aethionema arabicum HOM05D004673 ORTHO05D005596 1.8e-21 108.6 194 67.0
BraA03t12522Z Brassica rapa HOM05D004673 ORTHO05D005596 1.8e-21 108.6 204 62.3
DCAR_032195 Daucus carota HOM05D004673 ORTHO05D005596 3.9e-21 107.5 203 63.5
Cpa.g.c34637 Carica papaya HOM05D004673 ORTHO05D005596 5.1e-21 107.1 202 63.9
Cpa.g.sc1158.1 Carica papaya HOM05D004673 ORTHO05D005596 6.7e-21 106.7 203 64.0
DCAR_030101 Daucus carota HOM05D004673 ORTHO05D005596 1.5e-20 105.5 339 44.2
QL01p004480 Quercus lobata HOM05D004673 ORTHO05D005596 1.5e-20 105.5 198 65.7
vmacro23200 Vaccinium macrocarpon HOM05D005410 ORTHO05D007394 1.5e-20 105.5 199 63.3
CAN.G1834.13 Capsicum annuum HOM05D004673 ORTHO05D005596 1.9e-20 105.1 323 55.1
CARHR078050 Cardamine hirsuta HOM05D004673 ORTHO05D005596 1.9e-20 105.1 304 60.5
Haze_22936 Corylus avellana HOM05D004673 ORTHO05D005596 2.5e-20 104.8 202 62.9
CANSAT11G1431 Cannabis sativa HOM05D004673 ORTHO05D005596 3.3e-20 104.4 209 59.3
ECA233G4485 Erigeron canadensis HOM05D004673 ORTHO05D005596 4.3e-20 104.0 336 54.2
A03p33470 Brassica napus HOM05D004673 ORTHO05D005596 5.6e-20 103.6 322 56.8
DCAR_030100 Daucus carota HOM05D004673 ORTHO05D005596 7.4e-20 103.2 347 47.8
Lsat_1_v5_gn_6_55380 Lactuca sativa HOM05D004673 ORTHO05D005596 7.4e-20 103.2 190 66.3
DCAR_030112 Daucus carota HOM05D004673 ORTHO05D005596 1.3e-19 102.4 206 62.6
DCAR_030102 Daucus carota HOM05D004673 ORTHO05D005596 3.6e-19 100.9 182 66.5
DCAR_030979 Daucus carota HOM05D004673 ORTHO05D005596 3.6e-19 100.9 188 63.3
AT4G04220 Arabidopsis thaliana HOM05D004673 ORTHO05D005596 4.8e-19 100.5 328 54.3
CARHR253280 Cardamine hirsuta HOM05D004673 ORTHO05D005596 4.8e-19 100.5 195 51.8
DCAR_030110 Daucus carota HOM05D004673 ORTHO05D005596 4.8e-19 100.5 336 51.8
CsaV3_1G041610 Cucumis sativus L. HOM05D004673 ORTHO05D005596 8.1e-19 99.8 322 52.8
QL08p003638 Quercus lobata HOM05D004673 ORTHO05D005596 8.1e-19 99.8 233 56.7
QL01p004573 Quercus lobata HOM05D004673 ORTHO05D005596 1.1e-18 99.4 189 63.5
MELO3C015571.2 Cucumis melo HOM05D004673 ORTHO05D005596 1.4e-18 99.0 205 61.0
BcaB07g31134 Brassica carinata HOM05D004673 ORTHO05D005596 1.8e-18 98.6 305 60.7
DCAR_030109 Daucus carota HOM05D004673 ORTHO05D005596 1.8e-18 98.6 179 67.0
CARHR253250 Cardamine hirsuta HOM05D004673 ORTHO05D005596 4.0e-18 97.4 276 60.9
AUR62032689 Chenopodium quinoa HOM05D000750 ORTHO05D000714 6.9e-18 96.7 336 33.6
Lsat_1_v5_gn_6_55460 Lactuca sativa HOM05D004673 ORTHO05D005596 9.0e-18 96.3 182 64.8
QL01p016345 Quercus lobata HOM05D004673 ORTHO05D005596 1.5e-17 95.5 206 59.7
MBI11_g31283_MAGBIO Magnolia biondii HOM05D004151 ORTHO05D004775 2.0e-17 95.1 207 51.2
DCAR_013113 Daucus carota HOM05D004673 ORTHO05D005596 3.4e-17 94.4 218 58.7
CsaV3_1G041620 Cucumis sativus L. HOM05D004673 ORTHO05D005596 5.8e-17 93.6 203 61.1
QL08p003602 Quercus lobata HOM05D004673 ORTHO05D005596 5.8e-17 93.6 227 55.9
CARHR253370 Cardamine hirsuta HOM05D004673 ORTHO05D005596 1.3e-16 92.4 274 60.9
DCAR_030108 Daucus carota HOM05D004673 ORTHO05D005596 3.8e-16 90.9 176 64.8
MBI11_g38090_MAGBIO Magnolia biondii HOM05D004673 ORTHO05D005596 3.8e-16 90.9 214 60.3
Dinv13478 Davidia involucrata HOM05D004673 ORTHO05D005596 1.1e-15 89.4 72 61.1
QL01p004552 Quercus lobata HOM05D004673 ORTHO05D005596 1.1e-15 89.4 178 63.5
THA.LOC104816063 Tarenaya hassleriana HOM05D004673 ORTHO05D005596 1.1e-15 89.4 181 64.1
AL6G47840 Arabidopsis lyrata HOM05D004673 ORTHO05D005596 3.2e-15 87.8 296 53.4
Lsat_1_v5_gn_6_53540 Lactuca sativa HOM05D004673 ORTHO05D005596 3.2e-15 87.8 173 66.5
Aa31LG5G14510 Aethionema arabicum HOM05D004673 ORTHO05D005596 5.5e-15 87.0 268 54.9
COL.COLO4_13601 Corchorus olitorius HOM05D000750 ORTHO05D000714 7.1e-15 86.7 206 31.1
QL01p016358 Quercus lobata HOM05D004673 ORTHO05D005596 9.3e-15 86.3 201 58.7
BcaC01g04387 Brassica carinata HOM05D004673 ORTHO05D005596 1.2e-14 85.9 176 42.6
CARHR253240 Cardamine hirsuta HOM05D004673 ORTHO05D005596 1.2e-14 85.9 170 52.9
HanXRQChr13g0405711 Helianthus annuus HOM05D004673 ORTHO05D005596 1.6e-14 85.5 217 56.7
Thhalv10027707m.g Eutrema salsugineum HOM05D004673 ORTHO05D005596 2.1e-14 85.1 179 64.2
HanXRQChr13g0405741 Helianthus annuus HOM05D004673 ORTHO05D005596 2.1e-14 85.1 338 50.9
CARHR253180 Cardamine hirsuta HOM05D004673 ORTHO05D005596 2.7e-14 84.7 285 54.0
DCAR_030125 Daucus carota HOM05D004673 ORTHO05D005596 3.5e-14 84.3 146 77.4
COL.COLO4_13600 Corchorus olitorius HOM05D004673 ORTHO05D005596 1.8e-13 82.0 60 65.0
CARHR253290 Cardamine hirsuta HOM05D004673 ORTHO05D005596 3.0e-13 81.3 236 66.9
GSVIVG01025477001 Vitis vinifera HOM05D004673 ORTHO05D005596 8.7e-13 79.7 67 53.7
ECA233G2517 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-12 79.3 164 71.3
Ciclev10018053m.g Citrus clementina HOM05D004673 ORTHO05D005596 1.5e-12 79.0 277 57.8
Hma1.2p1_0589F.1_g184830 Hydrangea macrophylla HOM05D004673 ORTHO05D005596 5.6e-12 77.0 202 47.0
ATR0697G215 Amborella trichopoda HOM05D004673 ORTHO05D005596 9.6e-12 76.3 186 60.2
C09p23810 Brassica napus HOM05D004673 ORTHO05D005596 1.6e-11 75.5 178 42.1
BolC9t55304H Brassica oleracea HOM05D004673 ORTHO05D005596 1.6e-11 75.5 178 42.1
DCAR_030115 Daucus carota HOM05D004673 ORTHO05D005596 1.6e-11 75.5 138 78.3
DCAR_030118 Daucus carota HOM05D004673 ORTHO05D005596 1.8e-10 72.0 208 30.8
CARHR253200 Cardamine hirsuta HOM05D004673 ORTHO05D005596 3.1e-10 71.2 156 54.5
QL01p004463 Quercus lobata HOM05D004673 ORTHO05D005596 3.1e-10 71.2 149 66.4
AL3G13020 Arabidopsis lyrata HOM05D004673 ORTHO05D005596 2.6e-09 68.2 186 49.5
Dinv00553 Davidia involucrata HOM05D004673 ORTHO05D005596 1.0e-08 66.2 66 47.0
Dinv09265 Davidia involucrata HOM05D004673 ORTHO05D005596 1.3e-08 65.9 161 30.4
Lj1P522T31 Lonicera japonica HOM05D004673 ORTHO05D005596 1.7e-08 65.5 73 39.7
MBI11_g31285_MAGBIO Magnolia biondii HOM05D004673 ORTHO05D005596 1.7e-08 65.5 81 40.7
HPP92_013962 Vanilla planifolia HOM05D004673 ORTHO05D005596 1.7e-08 65.5 160 66.2
DCAR_030119 Daucus carota HOM05D004673 ORTHO05D005596 3.8e-08 64.3 82 42.7
QL01p004071 Quercus lobata HOM05D004673 ORTHO05D005596 4.9e-08 63.9 60 48.3
Lj2P776T43 Lonicera japonica HOM05D004673 ORTHO05D005596 6.5e-08 63.5 64 46.9
HPP92_013963 Vanilla planifolia HOM05D004673 ORTHO05D005596 8.4e-08 63.2 156 66.0
HPP92_013964 Vanilla planifolia HOM05D004673 ORTHO05D005596 3.2e-07 61.2 162 64.8
AL6G41120 Arabidopsis lyrata HOM05D000426 ORTHO05D005596 2.7e-06 58.2 64 40.6
Thhalv10027711m.g Eutrema salsugineum HOM05D004673 ORTHO05D005596 3.5e-06 57.8 60 43.3


User provided reference genes

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