Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.007G210400 Gossypium raimondii HOM05D005552 ORTHO05D006743 0.0e+00 1159.8 574 100.0
Gohir.D11G196500 Gossypium hirsutum HOM05D005552 ORTHO05D006743 0.0e+00 1146.7 574 99.0
Thecc.01G050800 Theobroma cacao HOM05D005552 ORTHO05D006743 3.2e-288 994.6 574 84.5
Duzib264G1173 Durio zibethinus HOM05D005552 ORTHO05D006743 1.2e-287 992.6 574 85.2
COL.COLO4_11363 Corchorus olitorius HOM05D005552 ORTHO05D006743 4.8e-284 980.7 574 83.8
Ciclev10025258m.g Citrus clementina HOM05D005552 ORTHO05D006743 1.5e-248 862.8 575 72.7
GSVIVG01003549001 Vitis vinifera HOM05D005552 ORTHO05D006743 3.2e-248 861.7 577 72.6
Dinv39890 Davidia involucrata HOM05D005552 ORTHO05D006743 7.5e-245 850.5 575 72.7
Prupe.7G138000 Prunus persica HOM05D005552 ORTHO05D006743 4.8e-244 847.8 577 72.3
MD15G1279300 Malus domestica HOM05D005552 ORTHO05D006743 8.2e-244 847.0 576 71.2
CiPaw.01G023200 Carya illinoinensis HOM05D005552 ORTHO05D006743 3.5e-242 841.6 575 69.7
Cfa003976 Carpinus fangiana HOM05D005552 ORTHO05D006743 2.2e-241 839.0 575 71.1
Cpa.g.sc6.396 Carica papaya HOM05D005552 ORTHO05D006743 6.5e-241 837.4 576 71.5
Potri.001G361900 Populus trichocarpa HOM05D005552 ORTHO05D006743 3.2e-240 835.1 577 71.4
FAN26G2590 Fragaria x ananassa HOM05D005552 ORTHO05D006743 8.8e-238 827.0 576 70.1
FAN28G0665 Fragaria x ananassa HOM05D005552 ORTHO05D006743 3.4e-237 825.1 576 70.1
FvH4_1g15480 Fragaria vesca HOM05D005552 ORTHO05D006743 2.2e-236 822.4 576 69.8
QL06p042750 Quercus lobata HOM05D005552 ORTHO05D006743 1.4e-235 819.7 574 70.0
Cc02_g34610 Coffea canephora HOM05D005552 ORTHO05D006743 7.0e-235 817.4 574 69.2
Actinidia12065 Actinidia chinensis HOM05D005552 ORTHO05D006743 2.7e-234 815.5 575 69.9
FAN19G0212 Fragaria x ananassa HOM05D005552 ORTHO05D006743 2.7e-234 815.5 576 69.3
MD02G1166800 Malus domestica HOM05D005552 ORTHO05D006743 1.0e-233 813.5 570 68.9
Haze_15444 Corylus avellana HOM05D005552 ORTHO05D006743 6.5e-233 810.8 586 68.6
RcHm_v2.0_Chr2g0104711 Rosa chinensis HOM05D005552 ORTHO05D006743 1.1e-232 810.1 576 69.1
CANSAT64G0631 Cannabis sativa HOM05D005552 ORTHO05D006743 2.7e-231 805.4 575 69.0
vmacro21371 Vaccinium macrocarpon HOM05D005552 ORTHO05D006743 8.0e-231 803.9 574 67.4
TWI09G0520 Tripterygium wilfordii HOM05D005552 ORTHO05D006743 1.7e-228 796.2 574 67.8
Oeu020899.1 Olea europaea HOM05D005552 ORTHO05D006743 1.9e-224 782.7 577 67.2
Eucgr.I00976 Eucalyptus grandis HOM05D005552 ORTHO05D006743 1.2e-223 780.0 574 65.7
PGR119G0642 Punica granatum HOM05D005552 ORTHO05D006743 1.6e-223 779.6 574 66.7
arahy.Tifrunner.gnm1.ann1.21BGDZ Arachis hypogaea HOM05D005552 ORTHO05D006743 2.1e-223 779.2 603 63.5
Lj4C139G4 Lonicera japonica HOM05D005552 ORTHO05D006743 2.1e-223 779.2 578 67.5
Glyma.11G058500 Glycine max HOM05D005552 ORTHO05D006743 6.1e-223 777.7 574 66.4
Glyma.01G183800 Glycine max HOM05D005552 ORTHO05D006743 3.0e-222 775.4 593 64.4
ClCG01G016650 Citrullus lanatus HOM05D005552 ORTHO05D006743 8.9e-222 773.9 574 66.6
CSS0032711 Camellia sinensis var. sinensis HOM05D005552 ORTHO05D006743 1.2e-221 773.5 575 67.5
THA.LOC104807572 Tarenaya hassleriana HOM05D005552 ORTHO05D006743 2.0e-221 772.7 575 64.2
Rhsim01G0119100 Rhododendron simsii HOM05D005552 ORTHO05D006743 5.7e-221 771.2 575 65.7
Gohir.A11G189700 Gossypium hirsutum HOM05D005552 ORTHO05D006743 2.3e-217 759.2 393 94.7
ECA232G0422 Erigeron canadensis HOM05D005552 ORTHO05D006743 3.0e-217 758.8 576 63.4
Sc16g0001610 Simmondsia chinensis HOM05D005552 ORTHO05D006743 5.0e-217 758.1 574 64.1
MELO3C007542.2 Cucumis melo HOM05D005552 ORTHO05D006743 8.6e-217 757.3 574 65.2
Sed0018600 Sechium edule HOM05D005552 ORTHO05D006743 1.4e-214 750.0 574 64.3
Psat2g165040 Pisum sativum HOM05D005552 ORTHO05D006743 1.8e-214 749.6 575 64.5
VMungo1215G1500 Vigna mungo HOM05D005552 ORTHO05D006743 2.0e-213 746.1 574 63.9
AUR62003843 Chenopodium quinoa HOM05D005552 ORTHO05D006743 2.6e-213 745.7 574 62.5
Sopen01g043680 Solanum pennellii HOM05D005552 ORTHO05D006743 2.6e-213 745.7 575 63.7
CAN.G1273.15 Capsicum annuum HOM05D005552 ORTHO05D006743 9.8e-213 743.8 576 63.9
Hund16313 Selenicereus undatus HOM05D005552 ORTHO05D006743 1.7e-212 743.0 574 63.4
Aqoxy6G00889 Aquilegia oxysepala HOM05D005552 ORTHO05D006743 2.2e-212 742.7 575 63.5
arahy.Tifrunner.gnm1.ann1.A2BBUY Arachis hypogaea HOM05D005552 ORTHO05D006743 2.2e-212 742.7 574 63.9
Ca_24792_v3 Cicer arietinum L. HOM05D005552 ORTHO05D006743 2.2e-212 742.7 574 62.7
Lj2g0010083 Lotus japonicus HOM05D005552 ORTHO05D006743 2.2e-212 742.7 574 63.8
Lalb_Chr05g0213171 Lupinus albus HOM05D005552 ORTHO05D006743 4.9e-212 741.5 574 63.6
Solyc01g100190.4 Solanum lycopersicum HOM05D005552 ORTHO05D006743 4.9e-212 741.5 575 62.6
Lj6g0016933 Lotus japonicus HOM05D005552 ORTHO05D006743 8.3e-212 740.7 574 63.8
PGSC0003DMG400024733 Solanum tuberosum HOM05D005552 ORTHO05D006743 1.1e-211 740.3 575 63.0
AUR62001963 Chenopodium quinoa HOM05D005552 ORTHO05D006743 1.6e-210 736.5 574 62.5
PSO541G0461 Papaver somniferum HOM05D005552 ORTHO05D006743 1.6e-210 736.5 576 62.7
PSO675G7200 Papaver somniferum HOM05D005552 ORTHO05D006743 2.0e-210 736.1 576 63.0
TPR.G11337 Trifolium pratense HOM05D005552 ORTHO05D006743 8.6e-209 730.7 574 62.9
Medtr5g017970 Medicago truncatula HOM05D005552 ORTHO05D006743 1.5e-208 729.9 575 63.5
AL7G13990 Arabidopsis lyrata HOM05D005552 ORTHO05D006743 2.5e-208 729.2 577 62.6
Sp7g34600 Schrenkiella parvula HOM05D005552 ORTHO05D006743 1.6e-207 726.5 577 62.4
AT4G37190 Arabidopsis thaliana HOM05D005552 ORTHO05D006743 2.1e-207 726.1 577 62.6
Carub.0007s0338 Capsella rubella HOM05D005552 ORTHO05D006743 2.8e-207 725.7 577 62.9
Lsat_1_v5_gn_4_168700 Lactuca sativa HOM05D005552 ORTHO05D006743 2.8e-207 725.7 577 61.5
Nitab4.5_0002715g0120 Nicotiana tabacum HOM05D005552 ORTHO05D006743 3.6e-207 725.3 604 60.8
HanXRQChr14g0430701 Helianthus annuus HOM05D005552 ORTHO05D006743 2.3e-206 722.6 575 61.9
CARHR245320 Cardamine hirsuta HOM05D005552 ORTHO05D006743 3.1e-206 722.2 576 62.5
MSTRG.5133 Avicennia marina HOM05D005552 ORTHO05D006743 4.9e-204 714.9 575 62.6
Aa31LG6G13810 Aethionema arabicum HOM05D005552 ORTHO05D006743 5.6e-200 701.4 575 60.3
Manes.16G089500 Manihot esculenta HOM05D005552 ORTHO05D006743 2.3e-198 696.0 497 70.6
Thhalv10024834m.g Eutrema salsugineum HOM05D005552 ORTHO05D006743 6.8e-198 694.5 577 60.5
A03p64710 Brassica napus HOM05D005552 ORTHO05D006743 4.3e-192 675.2 576 58.9
BraA03t15535Z Brassica rapa HOM05D005552 ORTHO05D006743 4.3e-192 675.2 576 58.9
CsaV3_6G043060 Cucumis sativus L. HOM05D005552 ORTHO05D006743 4.3e-192 675.2 531 64.2
Nitab4.5_0000368g0430 Nicotiana tabacum HOM05D005552 ORTHO05D006743 5.8e-189 664.8 603 57.4
HPP92_017765 Vanilla planifolia HOM05D005552 ORTHO05D006743 1.7e-188 663.3 578 56.4
C07p62120 Brassica napus HOM05D005552 ORTHO05D006743 2.2e-188 662.9 576 58.7
BolC7t46629H Brassica oleracea HOM05D005552 ORTHO05D006743 2.2e-188 662.9 576 58.7
Hma1.2p1_0873F.1_g231280 Hydrangea macrophylla HOM05D005552 ORTHO05D006743 2.9e-188 662.5 516 64.3
CDE04G2042 Ceratophyllum demersum HOM05D005552 ORTHO05D006743 6.4e-188 661.4 551 59.5
Phvul.002G021300 Phaseolus vulgaris HOM05D005552 ORTHO05D006743 1.4e-187 660.2 516 62.2
BcaNung04273 Brassica carinata HOM05D005552 ORTHO05D006743 1.9e-187 659.8 576 58.3
SGA_v2.0_scaffold36G14364 Striga asiatica HOM05D005552 ORTHO05D006743 1.6e-183 646.7 645 52.4
Os03g0240900 Oryza sativa ssp. japonica HOM05D005552 ORTHO05D006743 6.9e-182 641.3 576 53.6
ATR0767G265 Amborella trichopoda HOM05D005552 ORTHO05D006743 5.8e-181 638.3 553 57.7
Peaxi162Scf00073g00015 Petunia axillaris HOM05D005552 ORTHO05D006743 1.3e-180 637.1 502 62.5
TAR628G0695 Trochodendron aralioides HOM05D005552 ORTHO05D006743 8.4e-180 634.4 429 72.3
BcaNung03946 Brassica carinata HOM05D005552 ORTHO05D006743 2.7e-178 629.4 550 58.7
DCAR_010923 Daucus carota HOM05D005552 ORTHO05D006743 7.4e-176 621.3 680 49.7
Zm00001eb030410 Zea mays HOM05D005552 ORTHO05D006743 1.6e-175 620.2 575 52.5
Sopen01g043710 Solanum pennellii HOM05D005552 ORTHO05D006743 9.3e-171 604.4 475 62.9
Nn6g32078 Nelumbo nucifera HOM05D005552 ORTHO05D006743 2.6e-165 586.3 428 68.0
Hma1.2p1_0873F.1_g231290 Hydrangea macrophylla HOM05D005552 ORTHO05D006743 3.2e-163 579.3 451 63.9
FvH4_5g33502 Fragaria vesca HOM05D005552 ORTHO05D006743 5.5e-163 578.6 498 61.4
SEGI_18564 Sequoiadendron giganteum HOM05D005552 ORTHO05D006743 1.9e-155 553.5 553 49.7
Oeu035482.1 Olea europaea HOM05D005552 ORTHO05D006743 8.7e-153 544.7 394 67.5
TAR376G0305 Trochodendron aralioides HOM05D005552 ORTHO05D006743 5.0e-148 528.9 472 58.5
FAN18G3771 Fragaria x ananassa HOM05D005552 ORTHO05D006743 9.1e-142 508.1 368 69.6
Os12g0586400 Oryza sativa ssp. japonica HOM05D005552 ORTHO05D006743 3.8e-140 502.7 581 45.3
CDE06G0261 Ceratophyllum demersum HOM05D005552 ORTHO05D006743 3.1e-134 483.0 460 53.7
Atru.chr3.424 Acer truncatum HOM05D005552 ORTHO05D006743 6.5e-132 475.3 356 64.9
Mapoly0024s0139 Marchantia polymorpha HOM05D005552 ORTHO05D006743 8.0e-122 441.8 606 39.6
FAN08G3227 Fragaria x ananassa HOM05D005552 ORTHO05D006743 3.1e-118 429.9 474 51.3
SMO358G0218 Selaginella moellendorffii HOM05D005552 ORTHO05D006743 4.4e-112 409.5 574 41.8
Pp3c2_14950 Physcomitrium patens HOM05D005552 ORTHO05D006743 1.8e-110 404.1 609 39.9
HanXRQChr04g0119851 Helianthus annuus HOM05D005552 ORTHO05D006743 4.3e-107 392.9 296 62.5
unitig_26.g9473 Utricularia gibba HOM05D005552 ORTHO05D006743 7.3e-75 285.8 244 56.6
Atru.chr2.470 Acer truncatum HOM05D005552 ORTHO05D006743 2.6e-72 277.3 384 44.0
HanXRQChr04g0119841 Helianthus annuus HOM05D005552 ORTHO05D006743 1.5e-64 251.5 208 61.1
Atru.chr3.423 Acer truncatum HOM05D005552 ORTHO05D006743 8.4e-63 245.7 160 71.9
unitig_26.g9472 Utricularia gibba HOM05D005552 ORTHO05D006743 5.8e-56 223.0 278 46.4
CBR_g38209 Chara braunii HOM05D005552 ORTHO05D006743 1.1e-54 218.8 527 30.6
Psat4g201960 Pisum sativum HOM05D005552 ORTHO05D006743 1.1e-38 165.6 135 62.2
SHI23011 Sapria himalayana HOM05D005552 ORTHO05D006743 2.2e-34 151.4 152 48.7
arahy.Tifrunner.gnm1.ann1.ENA0P5 Arachis hypogaea HOM05D005552 ORTHO05D006743 1.7e-31 141.7 99 65.7
Cre01.g043700 Chlamydomonas reinhardtii HOM05D005552 ORTHO05D006743 8.5e-31 139.4 618 23.0
arahy.Tifrunner.gnm1.ann1.S73BBB Arachis hypogaea HOM05D005552 ORTHO05D006743 2.5e-30 137.9 405 28.4
SHI23015 Sapria himalayana HOM05D005552 ORTHO05D006743 1.2e-29 135.6 121 52.1
Psat1g136760 Pisum sativum HOM05D005552 ORTHO05D006743 2.7e-29 134.4 119 55.5
MCO05G662 Micromonas commoda HOM05D005552 ORTHO05D006743 3.6e-29 134.0 461 23.9
Peaxi162Scf00073g00115 Petunia axillaris HOM05D005552 ORTHO05D006743 4.1e-25 120.6 74 68.9
Cfa026632 Carpinus fangiana HOM05D005552 ORTHO05D006743 1.7e-23 115.2 367 25.1
TAR376G0458 Trochodendron aralioides HOM05D005552 ORTHO05D006743 1.7e-23 115.2 73 75.3
C01p02170 Brassica napus HOM05D005552 ORTHO05D006743 2.9e-23 114.4 115 49.6
BolC1t00209H Brassica oleracea HOM05D005552 ORTHO05D006743 2.9e-23 114.4 115 49.6
Cpa.g.sc6.394 Carica papaya HOM05D005552 ORTHO05D006743 1.9e-22 111.7 262 31.7
Psat5g241560 Pisum sativum HOM05D005552 ORTHO05D006743 6.7e-20 103.2 90 54.4
CSS0040680 Camellia sinensis var. sinensis HOM05D005552 ORTHO05D006743 7.4e-19 99.8 80 62.5
CSS0023439 Camellia sinensis var. sinensis HOM05D005552 ORTHO05D006743 1.6e-16 92.0 80 60.0
SHI23016 Sapria himalayana HOM05D000105 ORTHO05D000023 2.9e-15 87.8 56 73.2
Ah.11g041060 Amaranthus hybridus HOM05D005552 ORTHO05D006743 3.6e-13 80.9 52 65.4
FvH4_5g33501 Fragaria vesca HOM05D005552 ORTHO05D006743 1.8e-09 68.6 45 68.9
SEGI_06310 Sequoiadendron giganteum HOM05D005552 ORTHO05D006743 1.8e-09 68.6 51 58.8
arahy.Tifrunner.gnm1.ann1.SHY03S Arachis hypogaea HOM05D005552 ORTHO05D006743 2.9e-07 61.2 78 42.3
SHI23013 Sapria himalayana HOM05D001839 ORTHO05D001867 5.0e-07 60.5 70 45.7
CSS0024475 Camellia sinensis var. sinensis HOM05D005552 ORTHO05D113139 7.2e-06 56.6 58 51.7


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