Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.007G172600 Gossypium raimondii HOM05D006473 ORTHO05D008108 9.3e-104 380.2 188 100.0
Gohir.D11G162300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 1.2e-103 379.8 188 99.5
Gohir.A11G155300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 3.7e-100 368.2 188 96.8
Duzib138G0874 Durio zibethinus HOM05D006473 ORTHO05D008108 3.4e-69 265.4 184 75.5
Thecc.01G174700 Theobroma cacao HOM05D006473 ORTHO05D008108 1.8e-67 259.6 190 74.2
COL.COLO4_19989 Corchorus olitorius HOM05D006473 ORTHO05D008108 1.7e-60 236.5 185 68.1
COL.COLO4_18222 Corchorus olitorius HOM05D006473 ORTHO05D008108 7.8e-58 227.6 187 65.8
CiPaw.03G109100 Carya illinoinensis HOM05D006473 ORTHO05D008108 3.6e-47 192.2 181 56.9
Haze_13544 Corylus avellana HOM05D006473 ORTHO05D008108 2.6e-45 186.0 179 55.9
Cfa023365 Carpinus fangiana HOM05D006473 ORTHO05D008108 2.9e-44 182.6 179 55.3
FAN05G1961 Fragaria x ananassa HOM05D006473 ORTHO05D008108 9.2e-43 177.6 189 49.2
RcHm_v2.0_Chr2g0153221 Rosa chinensis HOM05D006473 ORTHO05D008108 7.8e-42 174.5 190 48.4
Sabra06G0006200 Salix brachista HOM05D006473 ORTHO05D008108 7.8e-42 174.5 187 53.5
TWI34G1686 Tripterygium wilfordii HOM05D006473 ORTHO05D008108 7.8e-42 174.5 179 53.1
Prupe.3G184300 Prunus persica HOM05D006473 ORTHO05D008108 3.9e-41 172.2 185 50.8
Glyma.13G004200 Glycine max HOM05D006473 ORTHO05D008108 3.3e-40 169.1 183 49.7
FvH4_6g39300 Fragaria vesca HOM05D006473 ORTHO05D008108 2.8e-39 166.0 185 47.0
MD17G1129800 Malus domestica HOM05D006473 ORTHO05D008108 2.8e-39 166.0 187 50.8
Lj6g0005292 Lotus japonicus HOM05D006473 ORTHO05D008108 3.6e-39 165.6 180 47.8
Potri.006G008000 Populus trichocarpa HOM05D006473 ORTHO05D008108 4.7e-39 165.2 178 52.8
TPR.G17559 Trifolium pratense HOM05D006473 ORTHO05D008108 1.1e-38 164.1 189 47.6
CiPaw.04G072200 Carya illinoinensis HOM05D006473 ORTHO05D008108 3.1e-38 162.5 189 50.3
FAN09G0937 Fragaria x ananassa HOM05D006473 ORTHO05D008108 8.9e-38 161.0 194 45.9
FAN14G2613 Fragaria x ananassa HOM05D006473 ORTHO05D008108 8.9e-38 161.0 194 45.9
CANSAT64G1482 Cannabis sativa HOM05D006473 ORTHO05D008108 2.0e-37 159.8 181 50.8
Ciclev10012907m.g Citrus clementina HOM05D006473 ORTHO05D008108 2.0e-37 159.8 170 50.6
MD09G1143500 Malus domestica HOM05D006473 ORTHO05D008108 2.0e-37 159.8 175 50.9
Glyma.20G063000 Glycine max HOM05D006473 ORTHO05D008108 1.3e-36 157.1 182 46.2
Sed0027280 Sechium edule HOM05D006473 ORTHO05D008108 1.7e-36 156.8 176 51.7
ClCG11G016910 Citrullus lanatus HOM05D006473 ORTHO05D008108 3.7e-36 155.6 174 51.7
MELO3C026363.2 Cucumis melo HOM05D006473 ORTHO05D008108 6.4e-36 154.8 174 52.9
CsaV3_4G032520 Cucumis sativus L. HOM05D006473 ORTHO05D008108 9.2e-35 151.0 174 50.0
Atru.chr8.1011 Acer truncatum HOM05D006473 ORTHO05D008108 1.2e-34 150.6 165 53.3
Sabra16G0000300 Salix brachista HOM05D006473 ORTHO05D008108 1.6e-34 150.2 179 48.6
Manes.08G068100 Manihot esculenta HOM05D006473 ORTHO05D008108 3.5e-34 149.1 170 47.1
Psat5g106240 Pisum sativum HOM05D006473 ORTHO05D008108 1.7e-33 146.7 175 48.0
Medtr3g082070 Medicago truncatula HOM05D006473 ORTHO05D008108 3.0e-33 146.0 175 46.9
Phvul.007G120134 Phaseolus vulgaris HOM05D006473 ORTHO05D008108 3.9e-33 145.6 178 46.6
PGR031G0759 Punica granatum HOM05D006473 ORTHO05D008108 4.3e-32 142.1 184 43.5
QL07p025679 Quercus lobata HOM05D006473 ORTHO05D008108 7.3e-32 141.4 188 47.3
Sed0014549 Sechium edule HOM05D006473 ORTHO05D008108 1.1e-30 137.5 179 48.6
QL07p026949 Quercus lobata HOM05D006473 ORTHO05D008108 1.4e-30 137.1 188 46.8
arahy.Tifrunner.gnm1.ann1.ITU10B Arachis hypogaea HOM05D006473 ORTHO05D008108 6.8e-30 134.8 176 44.3
Haze_13545 Corylus avellana HOM05D006473 ORTHO05D008108 6.8e-30 134.8 142 52.1
arahy.Tifrunner.gnm1.ann1.UN21ID Arachis hypogaea HOM05D006473 ORTHO05D008108 8.9e-30 134.4 172 44.8
VMungo0540G0033 Vigna mungo HOM05D006473 ORTHO05D008108 8.9e-30 134.4 169 46.2
Lalb_Chr17g0337141 Lupinus albus HOM05D006473 ORTHO05D008108 1.5e-29 133.7 172 45.9
Cpa.g.sc8.265 Carica papaya HOM05D006473 ORTHO05D008108 2.0e-29 133.3 182 43.4
Eucgr.A00949 Eucalyptus grandis HOM05D006473 ORTHO05D008108 4.4e-29 132.1 177 42.4
QL07p027003 Quercus lobata HOM05D006473 ORTHO05D008108 1.7e-28 130.2 188 45.2
QL10p019398 Quercus lobata HOM05D006473 ORTHO05D008108 2.2e-28 129.8 184 45.7
TAR626G1390 Trochodendron aralioides HOM05D006473 ORTHO05D008108 1.6e-26 123.6 170 45.9
Ca_16320_v3 Cicer arietinum L. HOM05D006473 ORTHO05D008108 1.3e-25 120.6 161 45.3
TAR626G1015 Trochodendron aralioides HOM05D006473 ORTHO05D008108 3.9e-25 119.0 170 45.3
Sp7g13370 Schrenkiella parvula HOM05D006473 ORTHO05D008108 5.1e-25 118.6 179 43.6
THA.LOC104808506 Tarenaya hassleriana HOM05D006473 ORTHO05D008108 5.1e-25 118.6 190 41.1
QL04p064817 Quercus lobata HOM05D006473 ORTHO05D008108 6.6e-25 118.2 175 41.7
Carub.0007s2685 Capsella rubella HOM05D006473 ORTHO05D008108 3.3e-24 115.9 179 44.1
A05p16970 Brassica napus HOM05D006473 ORTHO05D008108 7.3e-24 114.8 177 42.4
BraA05t20604Z Brassica rapa HOM05D006473 ORTHO05D008108 7.3e-24 114.8 177 42.4
CARHR221880 Cardamine hirsuta HOM05D006473 ORTHO05D008108 7.3e-24 114.8 172 44.8
BcaC08g44251 Brassica carinata HOM05D006473 ORTHO05D008108 2.8e-23 112.8 177 41.8
C06p16570 Brassica napus HOM05D006473 ORTHO05D008108 2.8e-23 112.8 177 41.8
BolC6t36859H Brassica oleracea HOM05D006473 ORTHO05D008108 2.8e-23 112.8 177 41.8
Nn7g38339 Nelumbo nucifera HOM05D006473 ORTHO05D008108 4.7e-23 112.1 171 43.3
CAN.G529.20 Capsicum annuum HOM05D006473 ORTHO05D008108 6.2e-23 111.7 155 44.5
Thhalv10027487m.g Eutrema salsugineum HOM05D006473 ORTHO05D008108 8.1e-23 111.3 178 42.1
Nitab4.5_0002292g0030 Nicotiana tabacum HOM05D006473 ORTHO05D008108 4.0e-22 109.0 175 39.4
AT4G15140 Arabidopsis thaliana HOM05D006473 ORTHO05D008108 5.2e-22 108.6 171 41.5
BcaB02g07838 Brassica carinata HOM05D006473 ORTHO05D008108 5.2e-22 108.6 174 37.4
Migut.H01260 Erythranthe guttata HOM05D006473 ORTHO05D008108 1.5e-21 107.1 157 43.9
A08p11670 Brassica napus HOM05D006473 ORTHO05D008108 2.0e-21 106.7 190 39.5
BraA08t33161Z Brassica rapa HOM05D006473 ORTHO05D008108 2.0e-21 106.7 190 39.5
Peaxi162Scf00322g00416 Petunia axillaris HOM05D006473 ORTHO05D008108 2.6e-21 106.3 181 39.2
Lsat_1_v5_gn_1_29560 Lactuca sativa HOM05D006473 ORTHO05D008108 3.4e-21 105.9 185 38.9
BcaC07g37876 Brassica carinata HOM05D006473 ORTHO05D008108 4.4e-21 105.5 183 40.4
BolC8t48269H Brassica oleracea HOM05D006473 ORTHO05D008108 4.4e-21 105.5 183 40.4
AL7G40560 Arabidopsis lyrata HOM05D006473 ORTHO05D008108 7.6e-21 104.8 173 39.9
Solyc07g043070.3 Solanum lycopersicum HOM05D006473 ORTHO05D008108 7.6e-21 104.8 174 41.4
Sopen07g022630 Solanum pennellii HOM05D006473 ORTHO05D008108 7.6e-21 104.8 174 41.4
PGSC0003DMG400013558 Solanum tuberosum HOM05D006473 ORTHO05D008108 7.6e-21 104.8 158 41.8
QL04p064939 Quercus lobata HOM05D006473 ORTHO05D008108 1.3e-20 104.0 176 40.3
Aa31LG9G2250 Aethionema arabicum HOM05D006473 ORTHO05D008108 1.7e-20 103.6 178 37.6
QL07p026979 Quercus lobata HOM05D006473 ORTHO05D008108 1.4e-19 100.5 152 45.4
BcaB04g18284 Brassica carinata HOM05D006473 ORTHO05D008108 3.2e-19 99.4 179 37.4
EL10Ac6g15336 Beta vulgaris HOM05D006473 ORTHO05D008108 4.2e-19 99.0 162 38.3
QL09p045725 Quercus lobata HOM05D006473 ORTHO05D008108 5.4e-19 98.6 151 43.7
Peaxi162Scf00393g01011 Petunia axillaris HOM05D006473 ORTHO05D008108 9.3e-19 97.8 173 39.9
Sc07g0001930 Simmondsia chinensis HOM05D006473 ORTHO05D008108 2.7e-18 96.3 184 38.6
GSVIVG01015888001 Vitis vinifera HOM05D006473 ORTHO05D008108 2.7e-18 96.3 157 40.1
Actinidia12507 Actinidia chinensis HOM05D006473 ORTHO05D008108 7.8e-18 94.7 191 39.3
Actinidia32074 Actinidia chinensis HOM05D006473 ORTHO05D008108 7.8e-18 94.7 201 38.3
Aqoxy5G02466 Aquilegia oxysepala HOM05D006473 ORTHO05D008108 1.3e-17 94.0 153 39.9
CSS0026100 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 1.7e-17 93.6 176 39.8
CSS0046570 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 1.7e-17 93.6 176 39.8
Cc00_g04870 Coffea canephora HOM05D006473 ORTHO05D008108 3.0e-17 92.8 155 37.4
ECA247G3587 Erigeron canadensis HOM05D006473 ORTHO05D008108 6.6e-17 91.7 179 38.0
Nitab4.5_0011512g0010 Nicotiana tabacum HOM05D006473 ORTHO05D008108 6.6e-17 91.7 162 42.0
HanXRQChr02g0035171 Helianthus annuus HOM05D006473 ORTHO05D008108 1.9e-16 90.1 178 36.0
vmacro08765 Vaccinium macrocarpon HOM05D006473 ORTHO05D008108 4.3e-16 89.0 176 37.5
DCAR_029496 Daucus carota HOM05D006473 ORTHO05D008108 7.3e-16 88.2 169 35.5
CDE05G3197 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 6.2e-15 85.1 153 36.6
PSO675G8005 Papaver somniferum HOM05D006473 ORTHO05D008108 6.2e-15 85.1 189 33.3
ATR0763G071 Amborella trichopoda HOM05D006473 ORTHO05D008108 8.1e-15 84.7 170 35.3
Cpa.g.sc32.52 Carica papaya HOM05D006473 ORTHO05D008108 1.1e-14 84.3 188 36.7
Rhsim12G0015400 Rhododendron simsii HOM05D006473 ORTHO05D008108 3.1e-14 82.8 154 37.0
Nitab4.5_0000170g0320 Nicotiana tabacum HOM05D006473 ORTHO05D008108 3.4e-13 79.3 124 43.5
Hund23023 Selenicereus undatus HOM05D006473 ORTHO05D008108 5.8e-13 78.6 167 34.7
Hund04387 Selenicereus undatus HOM05D006473 ORTHO05D008108 7.6e-13 78.2 149 32.2
SGA_v2.0_scaffold49G18372 Striga asiatica HOM05D006473 ORTHO05D008108 1.1e-11 74.3 147 35.4
CDE11G0296 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 3.2e-11 72.8 92 46.7
HPP92_016064 Vanilla planifolia HOM05D006473 ORTHO05D008108 2.1e-10 70.1 151 34.4
MBI02_g01129_MAGBIO Magnolia biondii HOM05D006464 ORTHO05D007923 3.5e-10 69.3 38 78.9
Oeu027256.1 Olea europaea HOM05D006473 ORTHO05D008108 1.0e-09 67.8 119 40.3
Os04g0504200 Oryza sativa ssp. japonica HOM05D006473 ORTHO05D008108 2.3e-09 66.6 162 30.2
QL05p058452 Quercus lobata HOM05D000045 ORTHO05D000611 6.7e-09 65.1 55 58.2
Zm00001eb078060 Zea mays HOM05D006473 ORTHO05D008108 8.7e-09 64.7 48 66.7
unitig_62.g23243 Utricularia gibba HOM05D006473 ORTHO05D008108 3.7e-07 59.3 44 61.4
Oeu036758.1 Olea europaea HOM05D006473 ORTHO05D008108 5.3e-06 55.5 32 71.9


User provided reference genes

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