Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.006G268500 Gossypium raimondii HOM05D007687 ORTHO05D009692 1.7e-132 476.1 253 100.0
Gohir.A09G243800 Gossypium hirsutum HOM05D007687 ORTHO05D009692 9.3e-115 417.2 253 90.1
Gorai.006G268600 Gossypium raimondii HOM05D007687 ORTHO05D009692 7.7e-85 317.8 264 67.0
Gohir.D09G244550 Gossypium hirsutum HOM05D007687 ORTHO05D009692 2.2e-84 316.2 264 65.9
Gohir.D09G244500 Gossypium hirsutum HOM05D007687 ORTHO05D009692 2.6e-80 302.8 162 95.7
Gohir.A09G243850 Gossypium hirsutum HOM05D007687 ORTHO05D009692 2.1e-66 256.5 232 63.8
Thecc.03G108300 Theobroma cacao HOM05D007687 ORTHO05D009692 1.7e-52 210.3 259 52.5
Duzib068G1012 Durio zibethinus HOM05D007687 ORTHO05D009692 9.5e-51 204.5 263 49.8
Duzib084G0111 Durio zibethinus HOM05D007687 ORTHO05D009692 6.6e-44 181.8 270 48.1
COL.COLO4_27494 Corchorus olitorius HOM05D000180 ORTHO05D009692 2.6e-40 169.9 278 45.7
Duzib205G1319 Durio zibethinus HOM05D007687 ORTHO05D009692 5.8e-40 168.7 243 46.5
Manes.14G089000 Manihot esculenta HOM05D007687 ORTHO05D009692 1.4e-22 110.9 266 33.8
QL10p020735 Quercus lobata HOM05D007687 ORTHO05D009692 5.4e-22 109.0 280 33.2
Prupe.5G209900 Prunus persica HOM05D007687 ORTHO05D009692 9.2e-22 108.2 249 39.0
Potri.015G048600 Populus trichocarpa HOM05D007687 ORTHO05D009692 1.6e-21 107.5 273 37.7
TAR629G0229 Trochodendron aralioides HOM05D007687 ORTHO05D009692 3.9e-20 102.8 272 36.0
Sed0010577 Sechium edule HOM05D007687 ORTHO05D009692 1.5e-19 100.9 282 34.0
Ciclev10024235m.g Citrus clementina HOM05D007687 ORTHO05D009692 9.5e-19 98.2 233 36.1
CiPaw.15G114100 Carya illinoinensis HOM05D007687 ORTHO05D009692 4.7e-18 95.9 254 35.4
MD14G1216500 Malus domestica HOM05D007687 ORTHO05D009692 4.0e-17 92.8 321 32.1
Cfa016835 Carpinus fangiana HOM05D007687 ORTHO05D009692 8.9e-17 91.7 178 41.6
CAN.G982.38 Capsicum annuum HOM05D007687 ORTHO05D009692 2.0e-16 90.5 275 31.6
Oeu044771.1 Olea europaea HOM05D007687 ORTHO05D009692 2.0e-16 90.5 268 32.1
Peaxi162Scf00017g03282 Petunia axillaris HOM05D007687 ORTHO05D009692 2.0e-16 90.5 261 31.8
TWI60G1328 Tripterygium wilfordii HOM05D007687 ORTHO05D009692 7.6e-16 88.6 232 34.1
Nitab4.5_0002467g0050 Nicotiana tabacum HOM05D007687 ORTHO05D009692 1.7e-15 87.4 260 31.2
Sabra15G0078700 Salix brachista HOM05D007687 ORTHO05D009692 2.9e-15 86.7 260 34.6
Atru.chr4.1593 Acer truncatum HOM05D007687 ORTHO05D009692 3.8e-15 86.3 211 37.4
Nn4g23535 Nelumbo nucifera HOM05D007687 ORTHO05D009692 4.9e-15 85.9 264 32.2
Manes.06G080900 Manihot esculenta HOM05D007687 ORTHO05D009692 5.4e-14 82.4 175 36.0
ClCG04G011570 Citrullus lanatus HOM05D007687 ORTHO05D009692 2.7e-13 80.1 218 33.9
FvH4_5g13402 Fragaria vesca HOM05D007687 ORTHO05D009692 6.0e-13 79.0 278 32.7
FAN18G0959 Fragaria x ananassa HOM05D007687 ORTHO05D009692 6.0e-13 79.0 278 32.7
Actinidia10442 Actinidia chinensis HOM05D007687 ORTHO05D009692 7.8e-13 78.6 253 29.6
Medtr4g109950 Medicago truncatula HOM05D007687 ORTHO05D009692 6.6e-12 75.5 156 34.6
Lj4g0013896 Lotus japonicus HOM05D007687 ORTHO05D009692 1.1e-11 74.7 229 27.5
AL8G37500 Arabidopsis lyrata HOM05D007687 ORTHO05D009692 2.5e-11 73.6 250 28.4
Medtr2g461550 Medicago truncatula HOM05D007687 ORTHO05D009692 2.5e-11 73.6 211 35.1
Solyc03g114770.3 Solanum lycopersicum HOM05D007687 ORTHO05D009692 9.6e-11 71.6 257 30.0
Sopen03g033850 Solanum pennellii HOM05D007687 ORTHO05D009692 9.6e-11 71.6 257 30.0
Ca_21756_v3 Cicer arietinum L. HOM05D007687 ORTHO05D009692 1.6e-10 70.9 152 34.9
Nitab4.5_0005994g0030 Nicotiana tabacum HOM05D007687 ORTHO05D009692 2.1e-10 70.5 241 29.5
VMungo1215G2041 Vigna mungo HOM05D007687 ORTHO05D009692 2.1e-10 70.5 238 29.8
AT5G60880 Arabidopsis thaliana HOM05D007687 ORTHO05D009692 8.1e-10 68.6 253 30.8
Glyma.17G081600 Glycine max HOM05D007687 ORTHO05D009692 1.4e-09 67.8 156 35.9
PGSC0003DMG400024621 Solanum tuberosum HOM05D007687 ORTHO05D009692 1.4e-09 67.8 202 32.2
BcaNung02611 Brassica carinata HOM05D007687 ORTHO05D009692 4.0e-09 66.2 254 29.5
C07p44640 Brassica napus HOM05D007687 ORTHO05D009692 4.0e-09 66.2 254 29.5
CsaV3_1G006250 Cucumis sativus L. HOM05D007687 ORTHO05D009692 4.0e-09 66.2 215 32.1
Thhalv10004801m.g Eutrema salsugineum HOM05D007687 ORTHO05D009692 5.2e-09 65.9 241 29.9
Lj5A137T61 Lonicera japonica HOM05D007687 ORTHO05D009692 6.9e-09 65.5 226 29.6
Phvul.003G182300 Phaseolus vulgaris HOM05D007687 ORTHO05D009692 6.9e-09 65.5 185 29.2
Cpa.g.sc3.233 Carica papaya HOM05D007687 ORTHO05D009692 2.0e-08 63.9 202 31.7
Haze_18510 Corylus avellana HOM05D007687 ORTHO05D009692 4.4e-08 62.8 145 40.7
BolC7t44987H Brassica oleracea HOM05D007687 ORTHO05D009692 7.6e-08 62.0 256 28.9
BraA03t13781Z Brassica rapa HOM05D007687 ORTHO05D009692 1.7e-07 60.8 231 28.6
Aa31LG11G2410 Aethionema arabicum HOM05D007687 ORTHO05D009692 4.9e-07 59.3 185 33.0
BcaC06g33202 Brassica carinata HOM05D007687 ORTHO05D009692 4.9e-07 59.3 235 29.8
A03p46570 Brassica napus HOM05D007687 ORTHO05D009692 6.4e-07 58.9 229 30.1
FAN08G0723 Fragaria x ananassa HOM05D007687 ORTHO05D009692 6.4e-07 58.9 299 29.4
Rhsim01G0212900 Rhododendron simsii HOM05D006174 ORTHO05D007987 1.1e-06 58.2 162 30.9
Dinv07975 Davidia involucrata HOM05D007687 ORTHO05D009692 1.4e-06 57.8 154 32.5
PGR031G0897 Punica granatum HOM05D007687 ORTHO05D009692 2.4e-06 57.0 203 28.1
Sp2g24190 Schrenkiella parvula HOM05D007687 ORTHO05D009692 2.4e-06 57.0 258 28.7
Cc04_g08290 Coffea canephora HOM05D007687 ORTHO05D009692 5.4e-06 55.8 268 29.1
FAN13G2354 Fragaria x ananassa HOM05D007687 ORTHO05D009692 5.4e-06 55.8 247 30.8


User provided reference genes

Program Settings