Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.006G192000 Gossypium raimondii HOM05D004897 ORTHO05D005928 9.0e-166 587.0 338 100.0
Gohir.A09G175700 Gossypium hirsutum HOM05D004897 ORTHO05D005928 3.5e-149 531.9 330 95.2
Duzib084G0246 Durio zibethinus HOM05D004897 ORTHO05D005928 5.8e-96 355.1 330 70.9
Thecc.03G053700 Theobroma cacao HOM05D004897 ORTHO05D005928 7.3e-91 338.2 332 67.5
Gohir.D12G269100 Gossypium hirsutum HOM05D004897 ORTHO05D005928 1.5e-75 287.3 334 60.8
Gorai.008G289400 Gossypium raimondii HOM05D004897 ORTHO05D005928 2.1e-74 283.5 334 60.5
Gohir.A12G268700 Gossypium hirsutum HOM05D004897 ORTHO05D005928 4.8e-74 282.3 334 60.5
COL.COLO4_16135 Corchorus olitorius HOM05D004897 ORTHO05D005928 2.0e-72 276.9 333 60.1
Cpa.g.sc3.408 Carica papaya HOM05D004897 ORTHO05D005928 1.0e-39 168.3 332 47.0
TWI60G0918 Tripterygium wilfordii HOM05D004897 ORTHO05D005928 1.5e-35 154.5 342 44.7
Cfa019677 Carpinus fangiana HOM05D004897 ORTHO05D005928 4.8e-34 149.4 337 42.1
Sabra15G0057300 Salix brachista HOM05D004897 ORTHO05D005928 8.2e-34 148.7 337 44.2
Potri.015G039800 Populus trichocarpa HOM05D004897 ORTHO05D005928 1.4e-33 147.9 338 43.5
Haze_18817 Corylus avellana HOM05D004897 ORTHO05D005928 1.8e-33 147.5 337 42.1
CiPaw.15G140900 Carya illinoinensis HOM05D004897 ORTHO05D005928 2.4e-33 147.1 341 45.7
MD06G1230800 Malus domestica HOM05D004897 ORTHO05D005928 4.5e-32 142.9 344 45.3
RcHm_v2.0_Chr7g0178571 Rosa chinensis HOM05D004897 ORTHO05D005928 2.9e-31 140.2 341 42.5
Manes.14G170400 Manihot esculenta HOM05D004897 ORTHO05D005928 5.0e-31 139.4 342 41.2
Prupe.5G232100 Prunus persica HOM05D004897 ORTHO05D005928 6.5e-31 139.0 345 43.5
QL10p028216 Quercus lobata HOM05D004897 ORTHO05D005928 1.9e-30 137.5 336 43.5
MD14G1235400 Malus domestica HOM05D004897 ORTHO05D005928 7.2e-30 135.6 348 43.7
QL10p028331 Quercus lobata HOM05D004897 ORTHO05D005928 7.2e-30 135.6 336 43.5
FAN13G1819 Fragaria x ananassa HOM05D004897 ORTHO05D005928 2.1e-29 134.0 339 42.2
TWI81G0456 Tripterygium wilfordii HOM05D004897 ORTHO05D005928 4.7e-29 132.9 344 39.2
FAN04G2242 Fragaria x ananassa HOM05D004897 ORTHO05D005928 3.3e-27 126.7 339 41.6
FAN08G3076 Fragaria x ananassa HOM05D004897 ORTHO05D005928 4.8e-26 122.9 339 41.9
FvH4_5g17221 Fragaria vesca HOM05D004897 ORTHO05D005928 5.3e-25 119.4 339 41.3
FAN18G0124 Fragaria x ananassa HOM05D004897 ORTHO05D005928 1.2e-24 118.2 339 41.0
CsaV3_1G004270 Cucumis sativus L. HOM05D004897 ORTHO05D005928 7.7e-24 115.5 335 39.4
GSVIVG01008418001 Vitis vinifera HOM05D004897 ORTHO05D005928 2.9e-23 113.6 341 41.3
Dinv10174 Davidia involucrata HOM05D004897 ORTHO05D005928 2.5e-22 110.5 348 38.8
Rhsim12G0138900 Rhododendron simsii HOM05D004897 ORTHO05D005928 1.6e-21 107.8 347 40.3
CSS0030961 Camellia sinensis var. sinensis HOM05D004897 ORTHO05D005928 3.6e-21 106.7 345 37.7
Glyma.05G244800 Glycine max HOM05D004897 ORTHO05D005928 1.0e-20 105.1 349 38.1
TAR622G0961 Trochodendron aralioides HOM05D004897 ORTHO05D005928 3.0e-20 103.6 353 40.2
Sed0002019 Sechium edule HOM05D004897 ORTHO05D005928 5.7e-19 99.4 338 35.5
ClCG06G014390 Citrullus lanatus HOM05D004897 ORTHO05D005928 7.5e-19 99.0 339 34.5
Ca_17200_v3 Cicer arietinum L. HOM05D004897 ORTHO05D005928 9.8e-19 98.6 335 36.4
MELO3C017351.2 Cucumis melo HOM05D004897 ORTHO05D005928 9.8e-19 98.6 335 35.2
Phvul.002G329100 Phaseolus vulgaris HOM05D004897 ORTHO05D005928 1.4e-17 94.7 341 35.2
Eucgr.B00942 Eucalyptus grandis HOM05D004897 ORTHO05D005928 1.8e-17 94.4 338 36.4
Lalb_Chr16g0387081 Lupinus albus HOM05D004897 ORTHO05D005928 1.8e-17 94.4 342 37.4
Ciclev10007731m.g Citrus clementina HOM05D004897 ORTHO05D005928 2.4e-17 94.0 330 38.2
arahy.Tifrunner.gnm1.ann1.QTT902 Arachis hypogaea HOM05D004897 ORTHO05D005928 4.1e-17 93.2 337 38.6
Hma1.2p1_0669F.1_g200180 Hydrangea macrophylla HOM05D004897 ORTHO05D005928 4.1e-17 93.2 348 37.4
arahy.Tifrunner.gnm1.ann1.Y8NJDB Arachis hypogaea HOM05D004897 ORTHO05D005928 1.2e-16 91.7 336 37.5
Actinidia35124 Actinidia chinensis HOM05D004897 ORTHO05D005928 1.3e-15 88.2 350 36.6
Nn4g24194 Nelumbo nucifera HOM05D004897 ORTHO05D005928 5.0e-15 86.3 357 33.1
Glyma.08G053300 Glycine max HOM05D004897 ORTHO05D005928 8.6e-15 85.5 346 36.4
Actinidia18901 Actinidia chinensis HOM05D004897 ORTHO05D005928 1.1e-14 85.1 285 33.0
vmacro16414 Vaccinium macrocarpon HOM05D004897 ORTHO05D005928 1.9e-14 84.3 339 38.3
VMungo0251G1788 Vigna mungo HOM05D004897 ORTHO05D005928 3.3e-14 83.6 340 34.1
Psat7g002120 Pisum sativum HOM05D004897 ORTHO05D005928 5.5e-14 82.8 345 34.5
THA.LOC104812165 Tarenaya hassleriana HOM05D004897 ORTHO05D005928 7.2e-14 82.4 342 35.4
Cc04_g06380 Coffea canephora HOM05D004897 ORTHO05D005928 1.4e-12 78.2 347 35.7
PGR083G0946 Punica granatum HOM05D004897 ORTHO05D005928 1.4e-12 78.2 337 33.8
Hund02326 Selenicereus undatus HOM05D004897 ORTHO05D005928 2.2e-10 70.9 181 35.9
Lalb_Chr05g0221751 Lupinus albus HOM05D004897 ORTHO05D005928 3.7e-10 70.1 334 30.8
Sc10g0009320 Simmondsia chinensis HOM05D004897 ORTHO05D005928 3.7e-10 70.1 176 38.6
Aa31LG7G2880 Aethionema arabicum HOM05D004897 ORTHO05D005928 1.1e-09 68.6 343 32.9
Carub.0001s1783 Capsella rubella HOM05D004897 ORTHO05D005928 2.4e-09 67.4 337 32.6
AT1G18190 Arabidopsis thaliana HOM05D004897 ORTHO05D005928 3.1e-09 67.0 332 33.7
TPR.G1406 Trifolium pratense HOM05D004897 ORTHO05D005928 5.4e-09 66.2 348 33.3
DCAR_014009 Daucus carota HOM05D004897 ORTHO05D005928 9.2e-09 65.5 332 34.9
AL1G30560 Arabidopsis lyrata HOM05D004897 ORTHO05D005928 3.5e-08 63.5 336 33.9
Lj9C421G3 Lonicera japonica HOM05D004897 ORTHO05D005928 4.5e-08 63.2 270 30.7
Lsat_1_v5_gn_8_144040 Lactuca sativa HOM05D004897 ORTHO05D005928 2.3e-07 60.8 202 34.7
Thhalv10007004m.g Eutrema salsugineum HOM05D004897 ORTHO05D005928 2.9e-07 60.5 342 32.7
Sp1g16170 Schrenkiella parvula HOM05D004897 ORTHO05D005928 3.8e-07 60.1 342 32.5
Medtr8g107060 Medicago truncatula HOM05D004897 ORTHO05D005928 9.5e-06 55.5 333 31.5
Nitab4.5_0006894g0040 Nicotiana tabacum HOM05D004897 ORTHO05D005928 9.5e-06 55.5 335 33.7


User provided reference genes

Program Settings