Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.006G174100 Gossypium raimondii HOM05D008555 ORTHO05D010760 1.8e-254 882.1 459 100.0
Gohir.D09G152600 Gossypium hirsutum HOM05D008555 ORTHO05D010760 4.7e-234 814.3 439 97.5
Gohir.A09G157300 Gossypium hirsutum HOM05D008555 ORTHO05D010760 4.6e-221 771.2 453 92.3
Duzib093G2048 Durio zibethinus HOM05D008555 ORTHO05D010760 4.1e-145 518.8 462 65.2
Thecc.05G042000 Theobroma cacao HOM05D008555 ORTHO05D010760 2.6e-139 499.6 465 63.7
COL.COLO4_14830 Corchorus olitorius HOM05D008555 ORTHO05D010760 2.5e-65 253.8 328 51.2
QL07p031190 Quercus lobata HOM05D008555 ORTHO05D010760 6.3e-45 186.0 491 33.4
QL07p047905 Quercus lobata HOM05D008555 ORTHO05D010760 6.3e-45 186.0 491 34.0
GSVIVG01034198001 Vitis vinifera HOM05D008555 ORTHO05D010760 1.2e-38 165.2 491 32.2
Cfa017405 Carpinus fangiana HOM05D008555 ORTHO05D010760 2.6e-38 164.1 420 34.0
Haze_20761 Corylus avellana HOM05D008555 ORTHO05D010760 1.6e-35 154.8 529 30.6
TAR623G0003 Trochodendron aralioides HOM05D008555 ORTHO05D010760 7.2e-33 146.0 529 31.6
Dinv37190 Davidia involucrata HOM05D008555 ORTHO05D010760 9.5e-33 145.6 457 32.2
MD04G1125500 Malus domestica HOM05D008555 ORTHO05D010760 1.8e-28 131.3 494 28.9
vmacro20136 Vaccinium macrocarpon HOM05D008555 ORTHO05D010760 1.9e-25 121.3 328 35.1
CSS0010375 Camellia sinensis var. sinensis HOM05D008555 ORTHO05D010760 1.2e-24 118.6 463 31.5
MBI05_g06539_MAGBIO Magnolia biondii HOM05D008555 ORTHO05D010760 4.0e-23 113.6 192 39.6
Rhsim05G0190300 Rhododendron simsii HOM05D008555 ORTHO05D010760 5.8e-22 109.8 215 38.1
EL10Ac1g01982 Beta vulgaris HOM05D008555 ORTHO05D010760 9.8e-22 109.0 188 39.9
Prupe.6G252400 Prunus persica HOM05D008555 ORTHO05D010760 9.8e-22 109.0 415 29.9
Hund09315 Selenicereus undatus HOM05D008555 ORTHO05D010760 1.7e-21 108.2 190 39.5
Sc20g0004840 Simmondsia chinensis HOM05D008555 ORTHO05D010760 3.7e-21 107.1 192 37.0
Manes.08G133801 Manihot esculenta HOM05D008555 ORTHO05D010760 6.4e-21 106.3 427 28.3
FAN09G2752 Fragaria x ananassa HOM05D008555 ORTHO05D010760 1.9e-20 104.8 480 27.7
FAN05G3093 Fragaria x ananassa HOM05D008555 ORTHO05D010760 9.2e-20 102.4 492 28.3
RcHm_v2.0_Chr3g0467001 Rosa chinensis HOM05D008555 ORTHO05D010760 7.8e-19 99.4 485 26.6
FvH4_6g14100 Fragaria vesca HOM05D008555 ORTHO05D010760 1.7e-18 98.2 509 26.7
FAN02G2195 Fragaria x ananassa HOM05D008555 ORTHO05D010760 5.0e-18 96.7 457 27.4
SGA_v2.0_scaffold126G33802 Striga asiatica HOM05D008555 ORTHO05D010760 2.5e-17 94.4 113 46.9
HPP92_014313 Vanilla planifolia HOM05D008555 ORTHO05D010760 5.6e-17 93.2 259 32.8
AUR62042775 Chenopodium quinoa HOM05D008555 ORTHO05D010760 8.0e-16 89.4 411 28.5
Nn2g12801 Nelumbo nucifera HOM05D008555 ORTHO05D010760 8.0e-16 89.4 508 26.4
HanXRQChr04g0124781 Helianthus annuus HOM05D008555 ORTHO05D010760 1.1e-15 89.0 290 32.1
Lsat_1_v5_gn_8_82700 Lactuca sativa HOM05D008555 ORTHO05D010760 1.8e-15 88.2 364 27.7
Eucgr.A01250 Eucalyptus grandis HOM05D008555 ORTHO05D010760 3.1e-15 87.4 194 33.5
SalBow3G1082 Salvia bowleyana HOM05D008555 ORTHO05D010760 4.0e-15 87.0 326 31.0
Migut.J00343 Erythranthe guttata HOM05D008555 ORTHO05D010760 5.8e-14 83.2 361 28.0
ECA236G1276 Erigeron canadensis HOM05D008555 ORTHO05D010760 9.8e-14 82.4 175 37.7
AUR62019574 Chenopodium quinoa HOM05D008555 ORTHO05D010760 2.2e-13 81.3 407 27.5
Lsat_1_v5_gn_3_51821 Lactuca sativa HOM05D008555 ORTHO05D010760 4.9e-13 80.1 94 50.0
Cc06_g02800 Coffea canephora HOM05D008555 ORTHO05D010760 7.8e-11 72.8 96 39.6
Oeu024357.1 Olea europaea HOM05D008555 ORTHO05D010760 2.3e-10 71.2 403 28.8
Aqoxy4G02966 Aquilegia oxysepala HOM05D008555 ORTHO05D010760 6.6e-10 69.7 452 26.1


User provided reference genes

Program Settings