Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.006G166500 Gossypium raimondii HOM05D006467 ORTHO05D008012 3.5e-74 281.6 145 100.0
Gohir.D09G145300 Gossypium hirsutum HOM05D006467 ORTHO05D008012 7.5e-61 237.3 145 89.7
Gohir.A09G149400 Gossypium hirsutum HOM05D006467 ORTHO05D008012 9.5e-56 220.3 144 84.0
Thecc.05G060700 Theobroma cacao HOM05D006467 ORTHO05D008012 2.9e-44 182.2 141 73.0
Duzib128G1557 Durio zibethinus HOM05D006467 ORTHO05D008012 1.6e-42 176.4 141 73.0
COL.COLO4_27023 Corchorus olitorius HOM05D006467 ORTHO05D008012 2.1e-42 176.0 152 67.1
Gohir.A04G074100 Gossypium hirsutum HOM05D006467 ORTHO05D008012 3.9e-41 171.8 135 71.9
Gorai.009G417600 Gossypium raimondii HOM05D006467 ORTHO05D008012 1.6e-39 166.4 147 66.7
Cfa017565 Carpinus fangiana HOM05D006467 ORTHO05D008012 2.9e-36 155.6 139 61.2
Gohir.D04G113200 Gossypium hirsutum HOM05D006467 ORTHO05D008012 7.1e-35 151.0 97 82.5
Hma1.2p1_0614F.1_g189470 Hydrangea macrophylla HOM05D006467 ORTHO05D008012 9.3e-35 150.6 141 58.2
Lj5g0010745 Lotus japonicus HOM05D006467 ORTHO05D008012 2.1e-34 149.4 141 58.9
Ca_11474_v3 Cicer arietinum L. HOM05D006467 ORTHO05D008012 1.0e-33 147.1 141 56.0
Dinv35529 Davidia involucrata HOM05D006467 ORTHO05D008012 1.3e-33 146.7 140 57.1
Dinv35757 Davidia involucrata HOM05D006467 ORTHO05D008012 3.9e-33 145.2 141 58.2
QL07p044433 Quercus lobata HOM05D006467 ORTHO05D008012 3.9e-33 145.2 138 56.5
TPR.G21203 Trifolium pratense HOM05D006467 ORTHO05D008012 3.9e-33 145.2 141 56.0
CSS0042234 Camellia sinensis var. sinensis HOM05D006467 ORTHO05D008012 4.3e-32 141.7 138 54.3
Manes.08G007300 Manihot esculenta HOM05D006467 ORTHO05D008012 4.3e-32 141.7 140 56.4
Atru.chr8.1867 Acer truncatum HOM05D006467 ORTHO05D008012 5.6e-32 141.4 143 53.8
Potri.016G090000 Populus trichocarpa HOM05D006467 ORTHO05D008012 1.3e-31 140.2 141 53.9
Potri.006G127800 Populus trichocarpa HOM05D006467 ORTHO05D008012 1.6e-31 139.8 141 53.9
CANSAT80G0273 Cannabis sativa HOM05D006467 ORTHO05D008012 2.1e-31 139.4 143 58.0
TAR369G0155 Trochodendron aralioides HOM05D006467 ORTHO05D008012 2.1e-31 139.4 141 56.0
Glyma.10G053300 Glycine max HOM05D006467 ORTHO05D008012 2.8e-31 139.0 140 52.9
Medtr1g064490 Medicago truncatula HOM05D006467 ORTHO05D008012 3.7e-31 138.7 137 52.6
Actinidia19675 Actinidia chinensis HOM05D006467 ORTHO05D008012 4.8e-31 138.3 141 52.5
Ciclev10013106m.g Citrus clementina HOM05D006467 ORTHO05D008012 4.8e-31 138.3 141 51.1
FAN09G2873 Fragaria x ananassa HOM05D006467 ORTHO05D008012 6.2e-31 137.9 139 51.8
GSVIVG01025685001 Vitis vinifera HOM05D006467 ORTHO05D008012 6.2e-31 137.9 126 59.5
CiPaw.09G176000 Carya illinoinensis HOM05D006467 ORTHO05D008012 8.1e-31 137.5 139 52.5
Oeu059967.1 Olea europaea HOM05D006467 ORTHO05D008012 1.4e-30 136.7 139 54.0
TAR623G0732 Trochodendron aralioides HOM05D006467 ORTHO05D008012 1.8e-30 136.3 140 52.9
Glyma.13G140300 Glycine max HOM05D006467 ORTHO05D008012 2.4e-30 136.0 137 51.8
EL10Ac7g16554 Beta vulgaris HOM05D006467 ORTHO05D008012 5.3e-30 134.8 141 53.2
Lalb_Chr21g0314871 Lupinus albus HOM05D006467 ORTHO05D008012 5.3e-30 134.8 141 52.5
FAN14G3947 Fragaria x ananassa HOM05D006467 ORTHO05D008012 9.0e-30 134.0 139 49.6
TWI77G0724 Tripterygium wilfordii HOM05D006467 ORTHO05D008012 9.0e-30 134.0 137 54.0
RcHm_v2.0_Chr3g0469601 Rosa chinensis HOM05D006467 ORTHO05D008012 1.2e-29 133.7 138 50.0
FAN02G4276 Fragaria x ananassa HOM05D006467 ORTHO05D008012 2.0e-29 132.9 139 50.4
MD04G1097300 Malus domestica HOM05D006467 ORTHO05D008012 2.6e-29 132.5 136 53.7
Nn2g10804 Nelumbo nucifera HOM05D006467 ORTHO05D008012 3.4e-29 132.1 134 53.0
VMungo0720G0455 Vigna mungo HOM05D006467 ORTHO05D008012 5.8e-29 131.3 141 49.6
AL4G33560 Arabidopsis lyrata HOM05D006467 ORTHO05D008012 9.9e-29 130.6 143 55.2
Sabra16G0095600 Salix brachista HOM05D006467 ORTHO05D008012 9.9e-29 130.6 158 48.1
Lsat_1_v5_gn_2_109060 Lactuca sativa HOM05D006467 ORTHO05D008012 1.3e-28 130.2 133 51.9
Cpa.g.sc102.12 Carica papaya HOM05D006467 ORTHO05D008012 1.7e-28 129.8 142 51.4
Phvul.007G220100 Phaseolus vulgaris HOM05D006467 ORTHO05D008012 1.7e-28 129.8 142 50.7
Prupe.6G236600 Prunus persica HOM05D006467 ORTHO05D008012 1.7e-28 129.8 139 51.1
Sabra06G0100500 Salix brachista HOM05D006467 ORTHO05D008012 1.7e-28 129.8 160 46.9
Lj2A112T40 Lonicera japonica HOM05D006467 ORTHO05D008012 2.2e-28 129.4 134 53.7
arahy.Tifrunner.gnm1.ann1.HNS49Q Arachis hypogaea HOM05D006467 ORTHO05D008012 2.9e-28 129.0 137 51.1
arahy.Tifrunner.gnm1.ann1.RH0WXQ Arachis hypogaea HOM05D006467 ORTHO05D008012 2.9e-28 129.0 137 51.1
arahy.Tifrunner.gnm1.ann1.VPUZ6C Arachis hypogaea HOM05D006467 ORTHO05D008012 2.9e-28 129.0 137 51.1
Nn2g13105 Nelumbo nucifera HOM05D006467 ORTHO05D008012 2.9e-28 129.0 140 49.3
THA.LOC104823447 Tarenaya hassleriana HOM05D006467 ORTHO05D008012 3.8e-28 128.6 138 53.6
Thhalv10017389m.g Eutrema salsugineum HOM05D006467 ORTHO05D008012 4.9e-28 128.3 140 53.6
Peaxi162Scf00123g00014 Petunia axillaris HOM05D006467 ORTHO05D008012 4.9e-28 128.3 140 50.7
MSTRG.19165 Avicennia marina HOM05D006467 ORTHO05D008012 6.4e-28 127.9 136 52.2
SGA_v2.0_scaffold40G15542 Striga asiatica HOM05D006467 ORTHO05D008012 6.4e-28 127.9 149 49.7
A03p20520 Brassica napus HOM05D006467 ORTHO05D008012 8.4e-28 127.5 143 53.8
BraA03t11294Z Brassica rapa HOM05D006467 ORTHO05D008012 8.4e-28 127.5 143 53.8
FvH4_6g15910 Fragaria vesca HOM05D006467 ORTHO05D008012 1.1e-27 127.1 146 47.3
MD12G1118700 Malus domestica HOM05D006467 ORTHO05D008012 1.1e-27 127.1 136 51.5
Carub.0004s1909 Capsella rubella HOM05D006467 ORTHO05D008012 1.4e-27 126.7 140 53.6
Sc02g0001830 Simmondsia chinensis HOM05D006467 ORTHO05D008012 1.4e-27 126.7 137 49.6
ECA238G0062 Erigeron canadensis HOM05D006467 ORTHO05D008012 1.9e-27 126.3 140 48.6
Sopen09g002640 Solanum pennellii HOM05D006467 ORTHO05D008012 1.9e-27 126.3 140 50.0
BcaC01g06644 Brassica carinata HOM05D006467 ORTHO05D008012 3.2e-27 125.6 143 52.4
MELO3C009340.2 Cucumis melo HOM05D006467 ORTHO05D008012 3.2e-27 125.6 140 48.6
PGR142G2369 Punica granatum HOM05D006467 ORTHO05D008012 3.2e-27 125.6 140 50.7
SalBow8G4982 Salvia bowleyana HOM05D006467 ORTHO05D008012 4.2e-27 125.2 138 51.4
AT2G37195 Arabidopsis thaliana HOM05D006467 ORTHO05D008012 7.1e-27 124.4 143 53.1
CAN.G888.4 Capsicum annuum HOM05D006467 ORTHO05D008012 7.1e-27 124.4 135 51.9
Ah.15g092380 Amaranthus hybridus HOM05D006467 ORTHO05D008012 9.3e-27 124.0 137 52.6
C03p24120 Brassica napus HOM05D006467 ORTHO05D008012 9.3e-27 124.0 143 51.7
HanXRQChr07g0195271 Helianthus annuus HOM05D006467 ORTHO05D008012 9.3e-27 124.0 135 51.1
Solyc09g007800.3 Solanum lycopersicum HOM05D006467 ORTHO05D008012 9.3e-27 124.0 140 49.3
PGSC0003DMG400021546 Solanum tuberosum HOM05D006467 ORTHO05D008012 9.3e-27 124.0 140 50.0
Sp4g19510 Schrenkiella parvula HOM05D006467 ORTHO05D008012 1.2e-26 123.6 140 52.1
BolC3t14804H Brassica oleracea HOM05D006467 ORTHO05D008012 1.6e-26 123.2 143 51.7
Migut.J00532 Erythranthe guttata HOM05D006467 ORTHO05D008012 1.6e-26 123.2 143 51.0
CsaV3_3G035800 Cucumis sativus L. HOM05D006467 ORTHO05D008012 2.1e-26 122.9 135 49.6
Nitab4.5_0003923g0010 Nicotiana tabacum HOM05D006467 ORTHO05D008012 2.1e-26 122.9 141 51.1
Sed0017827 Sechium edule HOM05D006467 ORTHO05D008012 3.5e-26 122.1 140 51.4
Nitab4.5_0000101g0130 Nicotiana tabacum HOM05D006467 ORTHO05D008012 7.9e-26 120.9 141 49.6
PSO063G5019 Papaver somniferum HOM05D006467 ORTHO05D008012 7.9e-26 120.9 141 45.4
PSO339G1849 Papaver somniferum HOM05D006467 ORTHO05D008012 7.9e-26 120.9 141 45.4
CARHR131710 Cardamine hirsuta HOM05D006467 ORTHO05D008012 1.0e-25 120.6 133 54.1
AUR62033514 Chenopodium quinoa HOM05D006467 ORTHO05D008012 8.7e-25 117.5 137 48.9
Haze_20589 Corylus avellana HOM05D006467 ORTHO05D008012 8.7e-25 117.5 78 73.1
AUR62028561 Chenopodium quinoa HOM05D006467 ORTHO05D008012 1.5e-24 116.7 142 48.6
Aqoxy1G01232 Aquilegia oxysepala HOM05D006467 ORTHO05D008012 2.5e-24 115.9 134 47.8
MBI07_g19293_MAGBIO Magnolia biondii HOM05D006467 ORTHO05D008012 2.5e-24 115.9 141 46.1
vmacro20032 Vaccinium macrocarpon HOM05D006467 ORTHO05D008012 2.5e-24 115.9 173 42.2
Dinv37285 Davidia involucrata HOM05D006467 ORTHO05D008012 7.4e-24 114.4 82 67.1
ClCG10G020300 Citrullus lanatus HOM05D006467 ORTHO05D008012 2.8e-23 112.5 135 45.9
Aa31LG5G22520 Aethionema arabicum HOM05D006467 ORTHO05D008012 3.1e-22 109.0 143 47.6
Eucgr.K03249 Eucalyptus grandis HOM05D006467 ORTHO05D008012 4.0e-22 108.6 98 57.1
Cc06_g03930 Coffea canephora HOM05D006467 ORTHO05D008012 1.0e-20 104.0 130 46.9
DCAR_009295 Daucus carota HOM05D006467 ORTHO05D008012 2.9e-20 102.4 80 60.0
Hund20246 Selenicereus undatus HOM05D006467 ORTHO05D008012 2.9e-20 102.4 75 65.3
Psat6g070840 Pisum sativum HOM05D006467 ORTHO05D008012 7.1e-19 97.8 92 52.2
HPP92_022407 Vanilla planifolia HOM05D006467 ORTHO05D008012 2.5e-16 89.4 131 41.2
HPP92_027503 Vanilla planifolia HOM05D006467 ORTHO05D008012 3.3e-16 89.0 131 40.5
unitig_27.g25371 Utricularia gibba HOM05D006467 ORTHO05D008012 5.3e-14 81.6 99 41.4
ATR0048G054 Amborella trichopoda HOM05D006467 ORTHO05D008012 3.4e-13 79.0 96 43.8
Zm00001eb191980 Zea mays HOM05D006467 ORTHO05D008012 3.8e-12 75.5 105 42.9
FvH4_1g27957 Fragaria vesca HOM05D000871 ORTHO05D008012 6.5e-12 74.7 99 41.4
Zm00001eb258270 Zea mays HOM05D006467 ORTHO05D008012 3.2e-11 72.4 109 38.5
BcaC03g13318 Brassica carinata HOM05D006467 ORTHO05D008012 4.2e-11 72.0 112 43.8
BcaC03g13319 Brassica carinata HOM05D006467 ORTHO05D008012 4.2e-11 72.0 112 43.8
C07p17010 Brassica napus HOM05D006467 ORTHO05D008012 3.6e-10 68.9 105 42.9
C02p04540 Brassica napus HOM05D006467 ORTHO05D008012 6.1e-10 68.2 105 42.9
Os02g0805700 Oryza sativa ssp. japonica HOM05D006467 ORTHO05D008012 7.9e-10 67.8 82 48.8
BolC1t01590H Brassica oleracea HOM05D006467 ORTHO05D008012 1.8e-09 66.6 105 42.9
FvH4_1g28030 Fragaria vesca HOM05D000871 ORTHO05D008012 2.3e-09 66.2 61 52.5
C06p12980 Brassica napus HOM05D006467 ORTHO05D008012 3.0e-09 65.9 102 43.1
BcaC08g43911 Brassica carinata HOM05D006467 ORTHO05D008012 1.5e-08 63.5 55 63.6
PSO063G7135 Papaver somniferum HOM05D000530 ORTHO05D000621 2.4e-06 56.2 40 65.0


User provided reference genes

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