Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.006G133500 Gossypium raimondii HOM05D008152 ORTHO05D010231 1.0e-30 136.0 61 100.0
Gohir.D09G115470 Gossypium hirsutum HOM05D008152 ORTHO05D010231 1.1e-29 132.5 61 96.7
Duzib128G1278 Durio zibethinus HOM05D008152 ORTHO05D010231 4.2e-21 104.0 61 83.6
COL.COLO4_33936 Corchorus olitorius HOM05D008152 ORTHO05D010231 3.9e-19 97.4 61 78.7
Nn2g14938 Nelumbo nucifera HOM05D008152 ORTHO05D010231 1.1e-18 95.9 61 72.1
Ciclev10006402m.g Citrus clementina HOM05D008152 ORTHO05D010231 1.9e-18 95.1 61 68.9
Prupe.7G046400 Prunus persica HOM05D008152 ORTHO05D010231 3.7e-17 90.9 55 78.2
GSVIVG01033573001 Vitis vinifera HOM05D008152 ORTHO05D010231 3.7e-17 90.9 61 72.1
Manes.08G056600 Manihot esculenta HOM05D008152 ORTHO05D010231 1.1e-16 89.4 61 72.1
FvH4_6g25100 Fragaria vesca HOM05D008152 ORTHO05D010231 9.0e-16 86.3 61 67.2
FAN05G4131 Fragaria x ananassa HOM05D008152 ORTHO05D010231 9.0e-16 86.3 61 67.2
CAN.G1237.35 Capsicum annuum HOM05D008152 ORTHO05D010231 1.2e-15 85.9 58 65.5
Potri.006G043300 Populus trichocarpa HOM05D008152 ORTHO05D010231 1.2e-15 85.9 52 71.2
RcHm_v2.0_Chr2g0124931 Rosa chinensis HOM05D008152 ORTHO05D010231 2.6e-15 84.7 61 67.2
Migut.K00109 Erythranthe guttata HOM05D008152 ORTHO05D010231 3.4e-15 84.3 54 68.5
Nn7g36510 Nelumbo nucifera HOM05D008152 ORTHO05D010231 4.5e-15 84.0 59 67.8
CiPaw.09G044200 Carya illinoinensis HOM05D008152 ORTHO05D010231 1.3e-14 82.4 60 66.7
Phvul.001G124150 Phaseolus vulgaris HOM05D008152 ORTHO05D010231 2.2e-14 81.6 54 72.2
Phvul.001G124600 Phaseolus vulgaris HOM05D008152 ORTHO05D010231 2.2e-14 81.6 54 72.2
Glyma.03G128700 Glycine max HOM05D008152 ORTHO05D010231 2.9e-14 81.3 52 71.2
MD00G1073900 Malus domestica HOM05D008152 ORTHO05D010231 5.0e-14 80.5 54 70.4
MD12G1091200 Malus domestica HOM05D008152 ORTHO05D010231 5.0e-14 80.5 54 70.4
Nitab4.5_0010323g0030 Nicotiana tabacum HOM05D008152 ORTHO05D010231 6.5e-14 80.1 52 67.3
Lalb_Chr14g0365951 Lupinus albus HOM05D008152 ORTHO05D010231 1.4e-13 79.0 52 67.3
Glyma.19G131100 Glycine max HOM05D008152 ORTHO05D010231 3.2e-13 77.8 52 69.2
Medtr7g090035 Medicago truncatula HOM05D008152 ORTHO05D010231 3.2e-13 77.8 52 69.2
CSS0018961 Camellia sinensis var. sinensis HOM05D008152 ORTHO05D010231 9.4e-13 76.3 61 59.0
THA.LOC104816407 Tarenaya hassleriana HOM05D008152 ORTHO05D010231 9.4e-13 76.3 64 59.4
PGR031G3912 Punica granatum HOM05D008152 ORTHO05D010231 1.6e-12 75.5 60 60.0
Lj1g0004562 Lotus japonicus HOM05D008152 ORTHO05D010231 4.6e-12 73.9 59 64.4
Oeu013028.1 Olea europaea HOM05D008152 ORTHO05D010231 7.9e-12 73.2 54 61.1
Solyc10g084060.2 Solanum lycopersicum HOM05D008152 ORTHO05D010231 1.0e-11 72.8 59 59.3
SalBow6G4146 Salvia bowleyana HOM05D008152 ORTHO05D010231 1.4e-11 72.4 53 64.2
FAN09G1661 Fragaria x ananassa HOM05D008152 ORTHO05D010231 3.9e-11 70.9 47 70.2
Eucgr.K01615 Eucalyptus grandis HOM05D008152 ORTHO05D010231 6.7e-11 70.1 63 60.3
AL6G13710 Arabidopsis lyrata HOM05D008152 ORTHO05D010231 1.1e-10 69.3 61 55.7
C09p72760 Brassica napus HOM05D008152 ORTHO05D010231 1.1e-10 69.3 60 56.7
Manes.11G003500 Manihot esculenta HOM05D008152 ORTHO05D010231 2.6e-10 68.2 55 56.4
Psat3g078320 Pisum sativum HOM05D008152 ORTHO05D010231 3.3e-10 67.8 46 67.4
Thhalv10015225m.g Eutrema salsugineum HOM05D008152 ORTHO05D010231 5.7e-10 67.0 65 55.4
BcaB01g05765 Brassica carinata HOM05D008152 ORTHO05D010231 9.7e-10 66.2 57 59.6
BolC9t60014H Brassica oleracea HOM05D008152 ORTHO05D010231 1.7e-09 65.5 60 55.0
CARHR209180 Cardamine hirsuta HOM05D008152 ORTHO05D010231 1.7e-09 65.5 60 55.0
Sc13g0001370 Simmondsia chinensis HOM05D008152 ORTHO05D010231 1.7e-09 65.5 53 50.9
A10p32040 Brassica napus HOM05D008152 ORTHO05D010231 2.2e-09 65.1 60 55.0
Hund19113 Selenicereus undatus HOM05D008152 ORTHO05D010231 2.2e-09 65.1 52 57.7
BraA10t45248Z Brassica rapa HOM05D008152 ORTHO05D010231 4.8e-09 63.9 59 54.2
Carub.0006s0304 Capsella rubella HOM05D008152 ORTHO05D010231 6.3e-09 63.5 60 53.3
Aa31LG1G21240 Aethionema arabicum HOM05D008152 ORTHO05D010231 2.4e-08 61.6 28 85.7
BcaC06g32113 Brassica carinata HOM05D008152 ORTHO05D010231 3.1e-08 61.2 59 52.5
C03p01870 Brassica napus HOM05D008152 ORTHO05D010231 3.1e-08 61.2 54 55.6
Sed0008507 Sechium edule HOM05D008152 ORTHO05D010231 3.1e-08 61.2 45 57.8
A03p01520 Brassica napus HOM05D008152 ORTHO05D010231 4.1e-08 60.8 59 55.9
BraA02t04797Z Brassica rapa HOM05D008152 ORTHO05D010231 4.1e-08 60.8 58 53.4
BraA03t09529Z Brassica rapa HOM05D008152 ORTHO05D010231 4.1e-08 60.8 59 55.9
BolC2t06131H Brassica oleracea HOM05D008152 ORTHO05D010231 5.3e-08 60.5 63 52.4
Ciclev10033235m.g Citrus clementina HOM05D008152 ORTHO05D010231 6.9e-08 60.1 67 47.8
BcaB01g05882 Brassica carinata HOM05D008152 ORTHO05D010231 1.7e-06 55.5 49 55.1
Peaxi162Scf00130g01320 Petunia axillaris HOM05D008152 ORTHO05D010231 5.0e-06 53.9 40 65.0
Sed0007854 Sechium edule HOM05D008152 ORTHO05D010231 6.5e-06 53.5 60 43.3


User provided reference genes

Program Settings