Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A09G117600 Gossypium hirsutum HOM05D007473 ORTHO05D009459 1.0e-48 196.4 100 100.0
Gohir.D09G114400 Gossypium hirsutum HOM05D007473 ORTHO05D009459 1.0e-48 196.4 100 100.0
Gorai.006G132300 Gossypium raimondii HOM05D007473 ORTHO05D009459 1.0e-48 196.4 100 100.0
Thecc.08G199100 Theobroma cacao HOM05D007473 ORTHO05D009459 6.8e-45 183.7 100 91.0
Duzib116G0725 Durio zibethinus HOM05D007473 ORTHO05D009459 7.5e-44 180.3 100 89.0
COL.COLO4_36790 Corchorus olitorius HOM05D007473 ORTHO05D009459 2.2e-43 178.7 100 89.0
Duzib211G0408 Durio zibethinus HOM05D007473 ORTHO05D009459 2.4e-42 175.3 100 88.0
Ciclev10003143m.g Citrus clementina HOM05D007473 ORTHO05D009459 4.7e-38 161.0 100 80.0
Atru.chr13.1869 Acer truncatum HOM05D007473 ORTHO05D009459 3.4e-36 154.8 103 77.7
Cfa018218 Carpinus fangiana HOM05D007473 ORTHO05D009459 3.8e-35 151.4 102 76.5
QL09p016421 Quercus lobata HOM05D007473 ORTHO05D009459 1.1e-34 149.8 101 76.2
TWI59G1410 Tripterygium wilfordii HOM05D007473 ORTHO05D009459 1.9e-34 149.1 102 74.5
GSVIVG01036821001 Vitis vinifera HOM05D007473 ORTHO05D009459 2.4e-34 148.7 102 75.5
QL02p034734 Quercus lobata HOM05D007473 ORTHO05D009459 3.2e-34 148.3 101 76.2
Manes.02G188900 Manihot esculenta HOM05D007473 ORTHO05D009459 7.1e-34 147.1 100 77.0
Nitab4.5_0000051g0010 Nicotiana tabacum HOM05D007473 ORTHO05D009459 7.1e-34 147.1 102 77.5
Potri.013G116100 Populus trichocarpa HOM05D007473 ORTHO05D009459 9.2e-34 146.7 102 74.5
Nitab4.5_0004159g0050 Nicotiana tabacum HOM05D007473 ORTHO05D009459 1.6e-33 146.0 102 76.5
Manes.18G098100 Manihot esculenta HOM05D007473 ORTHO05D009459 2.7e-33 145.2 98 77.6
Cpa.g.sc66.113 Carica papaya HOM05D007473 ORTHO05D009459 3.5e-33 144.8 101 75.2
Haze_17885 Corylus avellana HOM05D007473 ORTHO05D009459 3.5e-33 144.8 103 74.8
Prupe.8G051200 Prunus persica HOM05D007473 ORTHO05D009459 3.5e-33 144.8 100 73.0
Oeu054499.1 Olea europaea HOM05D007473 ORTHO05D009459 6.0e-33 144.1 102 76.5
Sopen11g008770 Solanum pennellii HOM05D007473 ORTHO05D009459 7.8e-33 143.7 102 76.5
Migut.C01206 Erythranthe guttata HOM05D007473 ORTHO05D009459 3.0e-32 141.7 101 73.3
Solyc11g013850.2 Solanum lycopersicum HOM05D007473 ORTHO05D009459 3.0e-32 141.7 102 75.5
Aqoxy5G02488 Aquilegia oxysepala HOM05D007473 ORTHO05D009459 3.9e-32 141.4 101 71.3
PGSC0003DMG400030214 Solanum tuberosum HOM05D007473 ORTHO05D009459 3.9e-32 141.4 102 75.5
AUR62004677 Chenopodium quinoa HOM05D000623 ORTHO05D007511 5.1e-32 141.0 100 70.0
Sabra19G0097100 Salix brachista HOM05D007473 ORTHO05D009459 6.6e-32 140.6 103 72.8
AUR62023594 Chenopodium quinoa HOM05D007473 ORTHO05D009459 8.7e-32 140.2 101 69.3
Hma1.2p1_0510F.1_g168850 Hydrangea macrophylla HOM05D007473 ORTHO05D009459 1.1e-31 139.8 102 72.5
Nn1g08531 Nelumbo nucifera HOM05D007473 ORTHO05D009459 2.5e-31 138.7 101 73.3
MD05G1038600 Malus domestica HOM05D007473 ORTHO05D009459 4.3e-31 137.9 100 72.0
Potri.019G086700 Populus trichocarpa HOM05D007473 ORTHO05D009459 4.3e-31 137.9 103 70.9
MSTRG.25424 Avicennia marina HOM05D007473 ORTHO05D009459 7.3e-31 137.1 101 73.3
ClCG09G010330 Citrullus lanatus HOM05D007473 ORTHO05D009459 1.3e-30 136.3 98 72.4
Eucgr.F04148 Eucalyptus grandis HOM05D007473 ORTHO05D009459 1.6e-30 136.0 104 75.0
MELO3C023649.2 Cucumis melo HOM05D007473 ORTHO05D009459 2.8e-30 135.2 98 71.4
Ah.05g172820 Amaranthus hybridus HOM05D007473 ORTHO05D009459 4.8e-30 134.4 100 69.0
CsaV3_7G024330 Cucumis sativus L. HOM05D007473 ORTHO05D009459 4.8e-30 134.4 98 71.4
SalBow7G0569 Salvia bowleyana HOM05D007473 ORTHO05D009459 4.8e-30 134.4 100 73.0
AT1G71865 Arabidopsis thaliana HOM05D007473 ORTHO05D009459 6.2e-30 134.0 100 70.0
Sed0021533 Sechium edule HOM05D007473 ORTHO05D009459 8.1e-30 133.7 99 70.7
TAR628G1168 Trochodendron aralioides HOM05D007473 ORTHO05D009459 8.1e-30 133.7 102 71.6
AL2G31450 Arabidopsis lyrata HOM05D007473 ORTHO05D009459 1.1e-29 133.3 100 70.0
CARHR290890 Cardamine hirsuta HOM05D007473 ORTHO05D009459 2.4e-29 132.1 97 71.1
MD10G1044400 Malus domestica HOM05D007473 ORTHO05D009459 5.3e-29 131.0 100 68.0
Carub.0002s1863 Capsella rubella HOM05D007473 ORTHO05D009459 9.0e-29 130.2 100 68.0
Thhalv10019351m.g Eutrema salsugineum HOM05D007473 ORTHO05D009459 9.0e-29 130.2 103 68.0
Sabra13G0098400 Salix brachista HOM05D007473 ORTHO05D009459 1.2e-28 129.8 97 71.1
SGA_v2.0_scaffold25G11079 Striga asiatica HOM05D007473 ORTHO05D009459 1.2e-28 129.8 93 76.3
BolC6t39645H Brassica oleracea HOM05D007473 ORTHO05D009459 2.6e-28 128.6 105 66.7
BraA07t31366Z Brassica rapa HOM05D007473 ORTHO05D009459 2.6e-28 128.6 105 66.7
Oeu017869.1 Olea europaea HOM05D007473 ORTHO05D009459 2.6e-28 128.6 102 72.5
Sp5g26890 Schrenkiella parvula HOM05D007473 ORTHO05D009459 2.6e-28 128.6 103 66.0
SpUn0020_0080 Schrenkiella parvula HOM05D007473 ORTHO05D009459 2.6e-28 128.6 103 66.0
Sc23g0001050 Simmondsia chinensis HOM05D007473 ORTHO05D009459 2.6e-28 128.6 101 66.3
EL10Ac3g06462 Beta vulgaris HOM05D007473 ORTHO05D009459 4.4e-28 127.9 94 69.1
BcaC08g46619 Brassica carinata HOM05D007473 ORTHO05D009459 7.6e-28 127.1 105 65.7
A07p38010 Brassica napus HOM05D007473 ORTHO05D009459 7.6e-28 127.1 105 65.7
Cc00_g18070 Coffea canephora HOM05D007473 ORTHO05D009459 2.2e-27 125.6 101 66.3
CANSAT25G2275 Cannabis sativa HOM05D007473 ORTHO05D009459 2.9e-27 125.2 102 67.6
Lalb_Chr01g0009921 Lupinus albus HOM05D007473 ORTHO05D009459 2.9e-27 125.2 103 65.0
CiPaw.15G006600 Carya illinoinensis HOM05D007473 ORTHO05D009459 3.8e-27 124.8 102 67.6
PSO017G2761 Papaver somniferum HOM05D007473 ORTHO05D009459 6.4e-27 124.0 102 66.7
Peaxi162Scf00476g00621 Petunia axillaris HOM05D007473 ORTHO05D009459 1.9e-26 122.5 93 73.1
EL10Ac8g20095 Beta vulgaris HOM05D007473 ORTHO05D009459 2.4e-26 122.1 94 67.0
Lalb_Chr19g0129841 Lupinus albus HOM05D007473 ORTHO05D009459 2.4e-26 122.1 103 64.1
Phvul.004G085900 Phaseolus vulgaris HOM05D007473 ORTHO05D009459 2.4e-26 122.1 104 64.4
Glyma.02G075700 Glycine max HOM05D007473 ORTHO05D009459 3.2e-26 121.7 104 64.4
ATR0584G170 Amborella trichopoda HOM05D007473 ORTHO05D009459 4.2e-26 121.3 98 62.2
VMungo0464G1647 Vigna mungo HOM05D007473 ORTHO05D009459 7.1e-26 120.6 105 64.8
Glyma.16G157600 Glycine max HOM05D007473 ORTHO05D009459 1.2e-25 119.8 104 63.5
CSS0009978 Camellia sinensis var. sinensis HOM05D007473 ORTHO05D009459 2.7e-25 118.6 92 68.5
TPR.G30581 Trifolium pratense HOM05D007473 ORTHO05D009459 6.0e-25 117.5 101 65.3
EL10Ac1g01496 Beta vulgaris HOM05D007473 ORTHO05D009459 7.8e-25 117.1 94 64.9
THA.LOC104800103 Tarenaya hassleriana HOM05D007473 ORTHO05D009459 1.3e-24 116.3 96 68.8
A07p30540 Brassica napus HOM05D007473 ORTHO05D009459 2.3e-24 115.5 103 62.1
Medtr1g097080 Medicago truncatula HOM05D007473 ORTHO05D009459 3.9e-24 114.8 101 66.3
BcaC08g45751 Brassica carinata HOM05D007473 ORTHO05D009459 5.1e-24 114.4 103 62.1
BolC6t38636H Brassica oleracea HOM05D007473 ORTHO05D009459 5.1e-24 114.4 103 62.1
Lj5g0014701 Lotus japonicus HOM05D007473 ORTHO05D009459 5.1e-24 114.4 103 62.1
Aa31LG4G8770 Aethionema arabicum HOM05D007473 ORTHO05D009459 8.7e-24 113.6 96 63.5
C06p35300 Brassica napus HOM05D007473 ORTHO05D009459 1.1e-23 113.2 100 63.0
Os01g0871350 Oryza sativa ssp. japonica HOM05D007473 ORTHO05D009459 2.5e-23 112.1 100 60.0
BraA07t30689Z Brassica rapa HOM05D007473 ORTHO05D009459 4.3e-23 111.3 103 60.2
Zm00001eb289250 Zea mays HOM05D007473 ORTHO05D009459 5.6e-23 110.9 98 61.2
Psat6g188360 Pisum sativum HOM05D007473 ORTHO05D009459 9.6e-23 110.2 101 60.4
BcaC08g46617 Brassica carinata HOM05D007473 ORTHO05D009459 7.6e-20 100.5 113 55.8
Hund27069 Selenicereus undatus HOM05D007473 ORTHO05D009459 4.9e-19 97.8 83 60.2
EL10Ac8g20080 Beta vulgaris HOM05D007473 ORTHO05D009459 3.5e-17 91.7 90 60.0
SEGI_38346 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 4.6e-17 91.3 102 55.9
Zm00001eb348670 Zea mays HOM05D007473 ORTHO05D009459 1.1e-15 86.7 86 57.0
Aa31LG7G6620 Aethionema arabicum HOM05D007473 ORTHO05D009459 1.9e-15 85.9 80 58.8
EL10Ac8g20008 Beta vulgaris HOM05D007473 ORTHO05D009459 7.4e-15 84.0 75 61.3
EL10Ac4g08661 Beta vulgaris HOM05D007473 ORTHO05D009459 1.6e-14 82.8 93 54.8
BcaB03g15623 Brassica carinata HOM05D007473 ORTHO05D009459 1.4e-13 79.7 105 49.5
EL10Ac7g17167 Beta vulgaris HOM05D007473 ORTHO05D009459 1.8e-13 79.3 64 67.2
SEGI_24301 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 1.3e-06 56.6 105 36.2
SEGI_05572 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 4.8e-06 54.7 74 40.5


User provided reference genes

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