Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.006G121000 Gossypium raimondii HOM05D007819 ORTHO05D009848 5.5e-164 580.9 286 100.0
Gohir.A09G105900 Gossypium hirsutum HOM05D007819 ORTHO05D009848 7.7e-158 560.5 286 96.9
Thecc.09G261200 Theobroma cacao HOM05D007819 ORTHO05D009848 7.2e-148 527.3 286 89.5
Duzib168G1088 Durio zibethinus HOM05D007819 ORTHO05D009848 1.2e-147 526.6 301 85.7
Gohir.D09G102600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.5e-140 503.1 246 100.0
COL.COLO4_25254 Corchorus olitorius HOM05D007819 ORTHO05D009848 9.8e-137 490.3 260 89.2
Gohir.D05G077600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 8.8e-130 467.2 286 76.6
Gorai.009G079100 Gossypium raimondii HOM05D007819 ORTHO05D009848 8.8e-130 467.2 286 76.6
Gohir.A05G074800 Gossypium hirsutum HOM05D007819 ORTHO05D009848 3.4e-129 465.3 286 76.6
Gohir.A05G074866 Gossypium hirsutum HOM05D007819 ORTHO05D009848 2.4e-127 459.1 286 75.5
Manes.04G025500 Manihot esculenta HOM05D007819 ORTHO05D009848 5.4e-127 458.0 276 77.2
TWI75G0698 Tripterygium wilfordii HOM05D007819 ORTHO05D009848 8.9e-122 440.7 278 75.9
Nn2g10668 Nelumbo nucifera HOM05D007819 ORTHO05D009848 1.5e-121 439.9 281 74.0
RcHm_v2.0_Chr5g0060991 Rosa chinensis HOM05D007819 ORTHO05D009848 2.6e-121 439.1 277 77.3
FAN21G3467 Fragaria x ananassa HOM05D007819 ORTHO05D009848 3.4e-121 438.7 277 76.9
FAN25G2530 Fragaria x ananassa HOM05D007819 ORTHO05D009848 5.7e-121 438.0 277 76.2
CANSAT54G2163 Cannabis sativa HOM05D007819 ORTHO05D009848 1.7e-120 436.4 267 77.2
Cpa.g.sc318.6 Carica papaya HOM05D007819 ORTHO05D009848 4.9e-120 434.9 285 70.9
PGR102G1079 Punica granatum HOM05D007819 ORTHO05D009848 1.4e-119 433.3 246 83.3
PSO339G1273 Papaver somniferum HOM05D007819 ORTHO05D009848 3.2e-119 432.2 279 73.1
Atru.chr3.3713 Acer truncatum HOM05D007819 ORTHO05D009848 1.2e-118 430.3 278 74.5
PSO384G2242 Papaver somniferum HOM05D007819 ORTHO05D009848 4.6e-118 428.3 259 78.4
TAR623G0280 Trochodendron aralioides HOM05D007819 ORTHO05D009848 3.0e-117 425.6 257 78.6
Oeu017391.1 Olea europaea HOM05D007819 ORTHO05D009848 2.1e-115 419.5 268 73.5
Migut.N02626 Erythranthe guttata HOM05D007819 ORTHO05D009848 2.6e-113 412.5 268 72.4
Sopen06g001100 Solanum pennellii HOM05D007819 ORTHO05D009848 1.7e-112 409.8 258 72.5
Eucgr.B02464 Eucalyptus grandis HOM05D007819 ORTHO05D009848 4.1e-111 405.2 259 74.9
MD11G1124900 Malus domestica HOM05D007819 ORTHO05D009848 6.0e-110 401.4 276 68.5
MD03G1111000 Malus domestica HOM05D007819 ORTHO05D009848 7.8e-110 401.0 276 68.1
FAN16G1444 Fragaria x ananassa HOM05D007819 ORTHO05D009848 5.0e-109 398.3 351 59.8
Cc01_g11630 Coffea canephora HOM05D007819 ORTHO05D009848 1.9e-108 396.4 251 72.9
Lsat_1_v5_gn_2_25861 Lactuca sativa HOM05D007819 ORTHO05D009848 9.5e-108 394.0 252 72.6
CiPaw.13G106200 Carya illinoinensis HOM05D007819 ORTHO05D009848 6.2e-107 391.3 253 70.4
CiPaw.14G077700 Carya illinoinensis HOM05D007819 ORTHO05D009848 2.6e-105 386.0 262 69.8
Nitab4.5_0007369g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 2.2e-104 382.9 284 64.8
QL01p036876 Quercus lobata HOM05D007819 ORTHO05D009848 7.1e-103 377.9 258 67.8
CiPaw.13G106300 Carya illinoinensis HOM05D007819 ORTHO05D009848 6.0e-102 374.8 251 71.3
Hma1.2p1_2033F.1_g311900 Hydrangea macrophylla HOM05D007819 ORTHO05D009848 4.3e-100 368.6 244 68.9
CiPaw.14G077600 Carya illinoinensis HOM05D007819 ORTHO05D009848 2.8e-99 365.9 270 64.1
Nitab4.5_0000888g0180 Nicotiana tabacum HOM05D007819 ORTHO05D009848 1.8e-98 363.2 275 62.5
FvH4_3g33520 Fragaria vesca HOM05D007819 ORTHO05D009848 2.2e-96 356.3 211 82.0
DCAR_005475 Daucus carota HOM05D007819 ORTHO05D009848 1.2e-94 350.5 218 72.9
unitig_699.g19198 Utricularia gibba HOM05D007819 ORTHO05D009848 3.1e-90 335.9 258 62.8
AUR62006507 Chenopodium quinoa HOM05D007819 ORTHO05D009848 5.2e-90 335.1 295 56.3
Mapoly0103s0031 Marchantia polymorpha HOM05D007819 ORTHO05D009848 7.6e-89 331.3 252 61.9
Lj1A183T52 Lonicera japonica HOM05D007819 ORTHO05D009848 8.4e-88 327.8 249 64.3
Sc21g0003720 Simmondsia chinensis HOM05D007819 ORTHO05D009848 4.6e-86 322.0 212 71.2
Ciclev10029813m.g Citrus clementina HOM05D007819 ORTHO05D009848 1.7e-85 320.1 260 62.3
Zm00001eb013150 Zea mays HOM05D007819 ORTHO05D009848 1.9e-84 316.6 258 59.7
Prupe.6G093600 Prunus persica HOM05D007819 ORTHO05D009848 7.3e-84 314.7 198 73.2
HPP92_025075 Vanilla planifolia HOM05D007819 ORTHO05D009848 1.6e-83 313.5 280 52.1
Peaxi162Scf00389g00619 Petunia axillaris HOM05D007819 ORTHO05D009848 5.8e-81 305.1 247 59.9
Haze_23935 Corylus avellana HOM05D007819 ORTHO05D009848 7.6e-81 304.7 206 73.8
SGA_v2.0_scaffold2G00920 Striga asiatica HOM05D007819 ORTHO05D009848 4.9e-80 302.0 231 63.2
Solyc06g005100.3 Solanum lycopersicum HOM05D007819 ORTHO05D009848 4.0e-74 282.3 175 69.7
Nitab4.5_0000022g0250 Nicotiana tabacum HOM05D007819 ORTHO05D009848 5.3e-74 282.0 213 67.1
Nitab4.5_0001578g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 2.0e-73 280.0 247 56.7
Pp3c21_1570 Physcomitrium patens HOM05D007819 ORTHO05D009848 5.8e-73 278.5 266 49.6
CAN.G1171.1 Capsicum annuum HOM05D007819 ORTHO05D009848 1.3e-72 277.3 242 58.7
Dinv32800 Davidia involucrata HOM05D007819 ORTHO05D009848 3.2e-71 272.7 188 67.6
GSVIVG01025124001 Vitis vinifera HOM05D007819 ORTHO05D009848 1.4e-66 257.3 183 66.7
Pp3c9_23950 Physcomitrium patens HOM05D007819 ORTHO05D009848 3.1e-66 256.1 249 50.2
AagrBONN_evm.TU.Sc2ySwM_344.1297 Anthoceros agrestis HOM05D007819 ORTHO05D009848 6.9e-66 255.0 249 50.2
Pp3c15_22830 Physcomitrium patens HOM05D007819 ORTHO05D009848 2.0e-65 253.4 249 49.4
AagrBONN_evm.TU.Sc2ySwM_344.3840 Anthoceros agrestis HOM05D007819 ORTHO05D009848 3.4e-65 252.7 249 49.8
Mapoly0155s0016 Marchantia polymorpha HOM05D007819 ORTHO05D009848 7.6e-65 251.5 249 48.6
Mapoly0008s0213 Marchantia polymorpha HOM05D007819 ORTHO05D009848 3.8e-64 249.2 249 48.6
Mapoly0035s0019 Marchantia polymorpha HOM05D007819 ORTHO05D009848 4.9e-64 248.8 249 47.8
MSTRG.12613 Avicennia marina HOM05D007819 ORTHO05D009848 1.6e-62 243.8 168 65.5
PGSC0003DMG401025397 Solanum tuberosum HOM05D007819 ORTHO05D009848 1.3e-61 240.7 154 70.8
Mapoly0088s0067 Marchantia polymorpha HOM05D000370 ORTHO05D001335 7.4e-52 208.4 264 38.6
AUR62025022 Chenopodium quinoa HOM05D007819 ORTHO05D009848 2.8e-51 206.5 228 48.7
Pp3c3_24540 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.3e-48 197.6 261 35.6
Pp3c12_18930 Physcomitrium patens HOM05D000370 ORTHO05D009848 1.1e-47 194.5 261 35.2
Pp3c12_18938 Physcomitrium patens HOM05D000370 ORTHO05D009848 1.1e-47 194.5 261 35.2
Migut.O00707 Erythranthe guttata HOM05D007819 ORTHO05D009848 1.4e-47 194.1 131 64.9
EL10Ac9g22426 Beta vulgaris HOM05D007819 ORTHO05D009848 2.4e-42 176.8 136 61.8
MSTRG.12612 Avicennia marina HOM05D007819 ORTHO05D009848 7.2e-39 165.2 97 80.4
SalBow3G4000 Salvia bowleyana HOM05D007819 ORTHO05D009848 2.3e-37 160.2 104 75.0
CSS0001112 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 5.3e-34 149.1 97 75.3
CSS0025937 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 5.3e-34 149.1 97 75.3
QL01p036758 Quercus lobata HOM05D007819 ORTHO05D009848 5.3e-34 149.1 93 73.1
QL01p036766 Quercus lobata HOM05D007819 ORTHO05D009848 1.3e-32 144.4 99 70.7
Oeu012676.1 Olea europaea HOM05D007819 ORTHO05D009848 2.0e-25 120.6 74 71.6
Os03g0287100 Oryza sativa ssp. japonica HOM05D007819 ORTHO05D009848 2.7e-25 120.2 103 55.3
EL10Ac9g22427 Beta vulgaris HOM05D007819 ORTHO05D009848 2.7e-22 110.2 129 46.5
FAN11G3664 Fragaria x ananassa HOM05D007819 ORTHO05D009848 1.0e-21 108.2 66 84.8
AagrBONN_evm.TU.Sc2ySwM_117.2524 Anthoceros agrestis HOM05D007819 ORTHO05D009848 7.0e-10 68.9 51 52.9
CiPaw.09G094500 Carya illinoinensis HOM05D007819 ORTHO05D009848 2.3e-08 63.9 44 65.9


User provided reference genes

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