Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.006G099100 Gossypium raimondii HOM05D005672 ORTHO05D003038 2.5e-62 241.9 120 100.0
Gohir.D09G083500 Gossypium hirsutum HOM05D005672 ORTHO05D003038 7.4e-62 240.4 120 99.2
Gohir.A09G083600 Gossypium hirsutum HOM05D005672 ORTHO05D003038 8.2e-61 236.9 120 96.7
Thecc.06G084800 Theobroma cacao HOM05D005672 ORTHO05D003038 5.5e-25 117.9 120 50.0
Thecc.06G084700 Theobroma cacao HOM05D005672 ORTHO05D003038 2.6e-22 109.0 120 49.2
Gorai.006G099200 Gossypium raimondii HOM05D005672 ORTHO05D003038 3.3e-22 108.6 121 50.4
Gohir.D09G083600 Gossypium hirsutum HOM05D005672 ORTHO05D003038 9.7e-22 107.1 121 49.6
Duzib192G0507 Durio zibethinus HOM05D005672 ORTHO05D003038 1.7e-21 106.3 120 48.3
Duzib192G0432 Durio zibethinus HOM05D005672 ORTHO05D003038 2.2e-21 105.9 120 47.5
Duzib192G0711 Durio zibethinus HOM05D005672 ORTHO05D003038 2.2e-21 105.9 120 47.5
Duzib192G0991 Durio zibethinus HOM05D005672 ORTHO05D003038 2.8e-21 105.5 110 50.0
Thecc.06G084400 Theobroma cacao HOM05D005672 ORTHO05D003038 1.6e-19 99.8 120 45.8
Duzib235G0754 Durio zibethinus HOM05D005672 ORTHO05D003038 2.7e-19 99.0 123 40.7
Gohir.A09G083700 Gossypium hirsutum HOM05D005672 ORTHO05D003038 3.5e-19 98.6 90 50.0
Actinidia01798 Actinidia chinensis HOM05D005672 ORTHO05D003038 7.2e-17 90.9 109 44.0
Eucgr.J03010 Eucalyptus grandis HOM05D005672 ORTHO05D003038 9.4e-17 90.5 111 42.3
Duzib160G0695 Durio zibethinus HOM05D005672 ORTHO05D003038 1.2e-16 90.1 115 42.6
Actinidia32765 Actinidia chinensis HOM05D005672 ORTHO05D003038 1.6e-16 89.7 117 41.9
Eucgr.L03103 Eucalyptus grandis HOM05D005672 ORTHO05D003038 3.6e-16 88.6 111 42.3
Thecc.06G059000 Theobroma cacao HOM05D005672 ORTHO05D003038 3.6e-16 88.6 117 42.7
Thecc.06G054500 Theobroma cacao HOM05D005672 ORTHO05D003038 4.7e-16 88.2 112 42.9
Actinidia02490 Actinidia chinensis HOM05D005672 ORTHO05D003038 1.0e-15 87.0 118 39.8
Actinidia14259 Actinidia chinensis HOM05D005672 ORTHO05D003038 2.3e-15 85.9 117 40.2
Manes.04G122300 Manihot esculenta HOM05D005672 ORTHO05D003038 5.2e-15 84.7 118 38.1
Manes.04G122200 Manihot esculenta HOM05D005672 ORTHO05D003038 6.8e-15 84.3 118 38.1
ECA234G3627 Erigeron canadensis HOM05D005672 ORTHO05D003038 2.6e-14 82.4 103 40.8
MSTRG.22696 Avicennia marina HOM05D005672 ORTHO05D003038 5.7e-14 81.3 118 36.4
Prupe.3G072800 Prunus persica HOM05D005672 ORTHO05D003038 9.8e-14 80.5 115 34.8
MD17G1196900 Malus domestica HOM05D005672 ORTHO05D003038 1.3e-13 80.1 116 36.2
Duzib235G0878 Durio zibethinus HOM05D005672 ORTHO05D003038 1.7e-13 79.7 102 39.2
Duzib192G0747 Durio zibethinus HOM05D005672 ORTHO05D003038 2.8e-13 79.0 120 38.3
Lsat_1_v5_gn_5_129980 Lactuca sativa HOM05D005672 ORTHO05D003038 2.8e-13 79.0 114 36.8
Sed0001381 Sechium edule HOM05D005672 ORTHO05D003038 3.7e-13 78.6 111 37.8
Hund25654 Selenicereus undatus HOM05D005672 ORTHO05D003038 3.7e-13 78.6 110 39.1
Manes.04G122400 Manihot esculenta HOM05D005672 ORTHO05D003038 4.8e-13 78.2 118 35.6
TAR624G0127 Trochodendron aralioides HOM05D005672 ORTHO05D003038 4.8e-13 78.2 107 39.3
FAN05G0478 Fragaria x ananassa HOM05D005672 ORTHO05D003038 6.3e-13 77.8 108 38.0
HanXRQChr10g0314951 Helianthus annuus HOM05D005672 ORTHO05D003038 6.3e-13 77.8 116 38.8
Nn8g39245 Nelumbo nucifera HOM05D005672 ORTHO05D003038 6.3e-13 77.8 117 40.2
HanXRQChr14g0455911 Helianthus annuus HOM05D005672 ORTHO05D003038 8.3e-13 77.4 110 37.3
Prupe.3G072900 Prunus persica HOM05D005672 ORTHO05D003038 1.4e-12 76.6 123 35.8
ClCG09G002230 Citrullus lanatus HOM05D005672 ORTHO05D003038 1.8e-12 76.3 103 35.9
PGR102G1467 Punica granatum HOM05D005672 ORTHO05D003038 1.8e-12 76.3 119 33.6
Atru.chr1.3245 Acer truncatum HOM05D005672 ORTHO05D003038 3.1e-12 75.5 107 36.4
MD09G1214500 Malus domestica HOM05D005672 ORTHO05D003038 3.1e-12 75.5 122 36.9
Cc04_g03540 Coffea canephora HOM05D005672 ORTHO05D003038 7.0e-12 74.3 119 35.3
Ciclev10027568m.g Citrus clementina HOM05D005672 ORTHO05D003038 9.1e-12 73.9 117 42.7
Eucgr.J03009 Eucalyptus grandis HOM05D005672 ORTHO05D003038 1.6e-11 73.2 119 39.5
vmacro18924 Vaccinium macrocarpon HOM05D005672 ORTHO05D003038 4.5e-11 71.6 123 35.8
Duzib235G1402 Durio zibethinus HOM05D005672 ORTHO05D003038 7.7e-11 70.9 120 35.0
Migut.I00857 Erythranthe guttata HOM05D005672 ORTHO05D003038 7.7e-11 70.9 113 34.5
DCAR_016224 Daucus carota HOM05D005672 ORTHO05D003038 1.0e-10 70.5 112 33.9
Manes.04G122100 Manihot esculenta HOM05D005672 ORTHO05D003038 1.3e-10 70.1 118 35.6
SalBow2G2205 Salvia bowleyana HOM05D005672 ORTHO05D003038 1.3e-10 70.1 108 37.0
Peaxi162Scf00015g00326 Petunia axillaris HOM05D005672 ORTHO05D003038 1.7e-10 69.7 125 32.8
THA.LOC104823572 Tarenaya hassleriana HOM05D007482 ORTHO05D003038 1.7e-10 69.7 119 34.5
AT1G12660 Arabidopsis thaliana HOM05D007482 ORTHO05D003038 2.3e-10 69.3 126 36.5
Manes.04G121900 Manihot esculenta HOM05D005672 ORTHO05D003038 2.3e-10 69.3 118 35.6
Manes.04G122000 Manihot esculenta HOM05D005672 ORTHO05D003038 2.3e-10 69.3 118 35.6
QL05p025003 Quercus lobata HOM05D005672 ORTHO05D003038 2.3e-10 69.3 92 41.3
BcaB08g34260 Brassica carinata HOM05D007482 ORTHO05D003038 3.8e-10 68.6 126 35.7
Oeu006796.1 Olea europaea HOM05D005672 ORTHO05D003038 3.8e-10 68.6 118 33.9
Prupe.3G073800 Prunus persica HOM05D005672 ORTHO05D003038 8.6e-10 67.4 115 35.7
ClCG09G002270 Citrullus lanatus HOM05D005672 ORTHO05D003038 1.1e-09 67.0 85 38.8
Dinv30519 Davidia involucrata HOM05D005672 ORTHO05D003038 2.5e-09 65.9 99 35.4
Prupe.3G073000 Prunus persica HOM05D005672 ORTHO05D003038 2.5e-09 65.9 115 32.2
COL.COLO4_30353 Corchorus olitorius HOM05D005672 ORTHO05D003038 3.3e-09 65.5 76 42.1
CAN.G395.17 Capsicum annuum HOM05D005672 ORTHO05D003038 9.5e-09 63.9 125 32.0
Dinv30521 Davidia involucrata HOM05D005672 ORTHO05D003038 9.5e-09 63.9 115 35.7
Nn2g11778 Nelumbo nucifera HOM05D005672 ORTHO05D003038 9.5e-09 63.9 112 34.8
BolC8t52262H Brassica oleracea HOM05D007482 ORTHO05D003038 1.2e-08 63.5 126 34.1
CARHR012970 Cardamine hirsuta HOM05D007482 ORTHO05D003038 1.2e-08 63.5 125 34.4
Ciclev10027446m.g Citrus clementina HOM05D005672 ORTHO05D003038 1.2e-08 63.5 118 36.4
Nitab4.5_0000351g0210 Nicotiana tabacum HOM05D005672 ORTHO05D003038 1.2e-08 63.5 118 32.2
Nitab4.5_0002327g0030 Nicotiana tabacum HOM05D005672 ORTHO05D003038 1.2e-08 63.5 134 30.6
Nn8g39240 Nelumbo nucifera HOM05D005672 ORTHO05D003038 1.6e-08 63.2 86 39.5
Sopen06g025030 Solanum pennellii HOM05D005672 ORTHO05D003038 2.1e-08 62.8 119 31.1
THA.LOC104823573 Tarenaya hassleriana HOM05D007482 ORTHO05D003038 2.1e-08 62.8 119 34.5
BcaB08g34259 Brassica carinata HOM05D007482 ORTHO05D003038 2.8e-08 62.4 126 33.3
C08p47220 Brassica napus HOM05D007482 ORTHO05D003038 2.8e-08 62.4 126 33.3
BolC8t52261H Brassica oleracea HOM05D007482 ORTHO05D003038 2.8e-08 62.4 126 33.3
Carub.0001s1235 Capsella rubella HOM05D007482 ORTHO05D003038 2.8e-08 62.4 126 35.7
Solyc06g066750.3 Solanum lycopersicum HOM05D005672 ORTHO05D003038 2.8e-08 62.4 126 30.2
PGSC0003DMG400016538 Solanum tuberosum HOM05D005672 ORTHO05D003038 2.8e-08 62.4 119 31.1
BcaC01g02807 Brassica carinata HOM05D007482 ORTHO05D003038 6.1e-08 61.2 126 33.3
C03p60060 Brassica napus HOM05D007482 ORTHO05D003038 6.1e-08 61.2 126 33.3
Sp1g11250 Schrenkiella parvula HOM05D007482 ORTHO05D003038 6.1e-08 61.2 126 38.9
Nn8g39246 Nelumbo nucifera HOM05D005672 ORTHO05D003038 8.0e-08 60.8 71 39.4
BcaC05g25121 Brassica carinata HOM05D007482 ORTHO05D003038 1.0e-07 60.5 115 31.3
A06p32510 Brassica napus HOM05D007482 ORTHO05D003038 1.0e-07 60.5 126 33.3
Nn8g39244 Nelumbo nucifera HOM05D005672 ORTHO05D003038 1.0e-07 60.5 87 37.9
A09p63720 Brassica napus HOM05D007482 ORTHO05D003038 1.8e-07 59.7 127 32.3
BraA09t41720Z Brassica rapa HOM05D007482 ORTHO05D003038 1.8e-07 59.7 127 32.3
ECA232G2097 Erigeron canadensis HOM05D005672 ORTHO05D003038 1.8e-07 59.7 121 29.8
Prupe.6G180200 Prunus persica HOM05D005672 ORTHO05D003038 2.3e-07 59.3 117 29.9
Sp1g11270 Schrenkiella parvula HOM05D007482 ORTHO05D003038 2.3e-07 59.3 134 34.3
Sed0013481 Sechium edule HOM05D005672 ORTHO05D003038 2.3e-07 59.3 112 31.2
Prupe.3G072700 Prunus persica HOM05D005672 ORTHO05D003038 3.0e-07 58.9 117 29.9
Sed0008395 Sechium edule HOM05D005672 ORTHO05D003038 3.0e-07 58.9 111 29.7
AL1G24120 Arabidopsis lyrata HOM05D007482 ORTHO05D003038 4.0e-07 58.5 119 35.3
Thhalv10017433m.g Eutrema salsugineum HOM05D007482 ORTHO05D016827 4.0e-07 58.5 124 31.5
Aqoxy7G01810 Aquilegia oxysepala HOM05D005672 ORTHO05D003038 5.2e-07 58.2 117 29.9
A06p09020 Brassica napus HOM05D007482 ORTHO05D003038 5.2e-07 58.2 115 35.7
BraA06t24091Z Brassica rapa HOM05D007482 ORTHO05D003038 5.2e-07 58.2 115 35.7
C08p47210 Brassica napus HOM05D007482 ORTHO05D003038 6.8e-07 57.8 130 30.0
PSO782G2157 Papaver somniferum HOM05D005672 ORTHO05D003038 6.8e-07 57.8 122 32.8
AL1G24130 Arabidopsis lyrata HOM05D007482 ORTHO05D003038 8.9e-07 57.4 114 32.5
MELO3C023363.2 Cucumis melo HOM05D005672 ORTHO05D003038 1.2e-06 57.0 122 32.8
Ciclev10027058m.g Citrus clementina HOM05D005672 ORTHO05D003038 1.5e-06 56.6 93 38.7
FvH4_6g30990 Fragaria vesca HOM05D005672 ORTHO05D003038 1.5e-06 56.6 115 31.3
Nn8g39242 Nelumbo nucifera HOM05D005672 ORTHO05D003038 1.5e-06 56.6 66 40.9
AT1G12663 Arabidopsis thaliana HOM05D007482 ORTHO05D003038 2.0e-06 56.2 117 32.5
CSS0026145 Camellia sinensis var. sinensis HOM05D005672 ORTHO05D003038 4.4e-06 55.1 61 44.3
Prupe.3G072600 Prunus persica HOM05D005672 ORTHO05D003038 4.4e-06 55.1 108 30.6
Nn8g39241 Nelumbo nucifera HOM05D005672 ORTHO05D003038 5.7e-06 54.7 66 40.9
Nn8g39243 Nelumbo nucifera HOM05D005672 ORTHO05D003038 5.7e-06 54.7 66 39.4
Thhalv10009569m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 7.5e-06 54.3 103 37.9
Sed0004960 Sechium edule HOM05D005672 ORTHO05D003038 7.5e-06 54.3 92 33.7
Atru.chr1.3244 Acer truncatum HOM05D005672 ORTHO05D003038 9.8e-06 53.9 98 32.7
Nn2g15314 Nelumbo nucifera HOM05D005672 ORTHO05D003038 9.8e-06 53.9 107 35.5


User provided reference genes

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