Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.006G083000 Gossypium raimondii HOM05D008132 ORTHO05D005763 1.9e-68 262.7 164 100.0
Gohir.D07G195400 Gossypium hirsutum HOM05D008132 ORTHO05D005763 3.1e-47 192.2 143 94.4
Gohir.A07G188800 Gossypium hirsutum HOM05D008132 ORTHO05D005763 4.7e-27 125.2 150 72.0
COL.COLO4_04941 Corchorus olitorius HOM05D008132 ORTHO05D005763 1.4e-23 113.6 152 66.4
COL.COLO4_04214 Corchorus olitorius HOM05D008132 ORTHO05D005763 1.6e-22 110.2 143 70.6
Thecc.01G236900 Theobroma cacao HOM05D008132 ORTHO05D005763 2.1e-22 109.8 134 69.4
Thecc.01G186700 Theobroma cacao HOM05D008132 ORTHO05D005763 7.8e-22 107.8 134 65.7
COL.COLO4_36679 Corchorus olitorius HOM05D008132 ORTHO05D005763 3.9e-21 105.5 133 72.9
COL.COLO4_04943 Corchorus olitorius HOM05D008132 ORTHO05D005763 7.3e-20 101.3 135 63.7
COL.COLO4_04942 Corchorus olitorius HOM05D008132 ORTHO05D005763 2.4e-18 96.3 140 69.3
QL08p029862 Quercus lobata HOM05D008132 ORTHO05D005763 1.7e-16 90.1 137 57.7
Gohir.A07G085700 Gossypium hirsutum HOM05D008132 ORTHO05D005763 7.1e-15 84.7 130 58.5
GSVIVG01030407001 Vitis vinifera HOM05D008132 ORTHO05D005763 2.1e-14 83.2 168 53.0
Cpa.g.sc132.70 Carica papaya HOM05D008132 ORTHO05D005763 1.0e-13 80.9 132 55.3
Cpa.g.sc132.73 Carica papaya HOM05D008132 ORTHO05D005763 1.0e-13 80.9 132 55.3
Gohir.D07G195300 Gossypium hirsutum HOM05D008132 ORTHO05D005763 4.3e-12 75.5 141 59.6
Actinidia09763 Actinidia chinensis HOM05D008132 ORTHO05D005763 3.1e-10 69.3 160 48.8
CiPaw.03G275800 Carya illinoinensis HOM05D052008 ORTHO05D005763 6.9e-10 68.2 136 38.2
CANSAT56G4537 Cannabis sativa HOM05D008132 ORTHO05D005763 1.5e-09 67.0 132 59.1
Gorai.001G218500 Gossypium raimondii HOM05D008132 ORTHO05D005763 1.5e-09 67.0 162 51.9
THA.LOC104826607 Tarenaya hassleriana HOM05D008158 ORTHO05D010323 1.5e-09 67.0 134 56.7
PGR142G4197 Punica granatum HOM05D008132 ORTHO05D005763 4.4e-09 65.5 134 54.5
Gohir.A07G188640 Gossypium hirsutum HOM05D008132 ORTHO05D005763 5.8e-09 65.1 164 48.8
Medtr5g084330 Medicago truncatula HOM05D009657 ORTHO05D005763 7.6e-09 64.7 132 49.2
arahy.Tifrunner.gnm1.ann1.5E44W3 Arachis hypogaea HOM05D008132 ORTHO05D005763 9.9e-09 64.3 130 47.7
Migut.G00657 Erythranthe guttata HOM05D008132 ORTHO05D005763 1.3e-08 63.9 134 39.6
Migut.G01101 Erythranthe guttata HOM05D008132 ORTHO05D005763 1.3e-08 63.9 134 39.6
Migut.O00629 Erythranthe guttata HOM05D008132 ORTHO05D005763 1.3e-08 63.9 134 39.6
MD09G1118600 Malus domestica HOM05D008132 ORTHO05D005763 1.3e-08 63.9 132 52.3
RcHm_v2.0_Chr2g0157371 Rosa chinensis HOM05D019965 ORTHO05D005763 1.7e-08 63.5 140 42.9
MD09G1118100 Malus domestica HOM05D008132 ORTHO05D005763 2.2e-08 63.2 132 50.8
EL10Ac9g22778 Beta vulgaris HOM05D008132 ORTHO05D005763 2.9e-08 62.8 134 56.7
Nn1g09274 Nelumbo nucifera HOM05D008132 ORTHO05D005763 4.9e-08 62.0 137 55.5
Peaxi162Scf00286g00820 Petunia axillaris HOM05D008132 ORTHO05D005763 1.1e-07 60.8 133 36.8
A03p44640 Brassica napus HOM05D008158 ORTHO05D010323 1.9e-07 60.1 139 54.7
C03p55470 Brassica napus HOM05D008158 ORTHO05D010323 2.4e-07 59.7 138 50.0
Ciclev10017145m.g Citrus clementina HOM05D016168 ORTHO05D005763 3.2e-07 59.3 137 56.2
Oeu022674.1 Olea europaea HOM05D008132 ORTHO05D005763 3.2e-07 59.3 134 53.0
THA.LOC104826606 Tarenaya hassleriana HOM05D008158 ORTHO05D010323 3.2e-07 59.3 136 52.2
Nitab4.5_0000037g0280 Nicotiana tabacum HOM05D008132 ORTHO05D005763 4.2e-07 58.9 142 38.7
FvH4_6g41660 Fragaria vesca HOM05D019965 ORTHO05D005763 5.4e-07 58.5 131 59.5
FAN05G4078 Fragaria x ananassa HOM05D019965 ORTHO05D005763 5.4e-07 58.5 132 53.8
Nn1g09275 Nelumbo nucifera HOM05D008132 ORTHO05D005763 7.1e-07 58.2 136 51.5
FAN14G0955 Fragaria x ananassa HOM05D019965 ORTHO05D005763 1.2e-06 57.4 130 53.1
BcaB08g34503 Brassica carinata HOM05D008158 ORTHO05D010323 1.6e-06 57.0 130 56.2
Glyma.20G011500 Glycine max HOM05D021502 ORTHO05D005763 1.6e-06 57.0 134 34.3
BcaC01g03159 Brassica carinata HOM05D008158 ORTHO05D010323 2.1e-06 56.6 139 54.0
Cc03_g08950 Coffea canephora HOM05D008132 ORTHO05D005763 3.5e-06 55.8 136 57.4
Migut.G01096 Erythranthe guttata HOM05D008132 ORTHO05D005763 3.5e-06 55.8 160 46.2
Migut.G01155 Erythranthe guttata HOM05D008132 ORTHO05D005763 3.5e-06 55.8 148 51.4
FAN09G1211 Fragaria x ananassa HOM05D019965 ORTHO05D005763 3.5e-06 55.8 132 44.7


User provided reference genes

Program Settings