Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.006G072000 Gossypium raimondii HOM05D006457 ORTHO05D008275 1.1e-134 483.4 252 100.0
Gohir.A09G058300 Gossypium hirsutum HOM05D006457 ORTHO05D008275 6.8e-134 480.7 252 99.2
Duzib212G0218 Durio zibethinus HOM05D006457 ORTHO05D008275 2.7e-130 468.8 252 95.2
Thecc.04G253200 Theobroma cacao HOM05D006457 ORTHO05D008275 1.5e-128 463.0 252 94.0
Sed0004292 Sechium edule HOM05D006457 ORTHO05D008275 1.7e-121 439.5 252 86.5
Cfa008326 Carpinus fangiana HOM05D006457 ORTHO05D008275 3.9e-121 438.3 252 89.3
QL06p016992 Quercus lobata HOM05D006457 ORTHO05D008275 6.6e-121 437.6 251 87.6
Haze_11345 Corylus avellana HOM05D006457 ORTHO05D008275 8.6e-121 437.2 252 88.9
Potri.008G165800 Populus trichocarpa HOM05D006457 ORTHO05D008275 2.5e-120 435.6 252 87.3
ClCG05G004380 Citrullus lanatus HOM05D006457 ORTHO05D008275 5.6e-120 434.5 250 86.4
MELO3C006434.2 Cucumis melo HOM05D006457 ORTHO05D008275 7.3e-120 434.1 252 86.1
Hma1.2p1_0267F.1_g107360 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 9.5e-120 433.7 252 86.9
Nn1g02723 Nelumbo nucifera HOM05D006457 ORTHO05D008275 1.6e-119 433.0 252 87.7
Prupe.1G037500 Prunus persica HOM05D006457 ORTHO05D008275 1.6e-119 433.0 252 87.7
CsaV3_3G012200 Cucumis sativus L. HOM05D006457 ORTHO05D008275 2.1e-119 432.6 252 86.1
GSVIVG01027767001 Vitis vinifera HOM05D006457 ORTHO05D008275 3.6e-119 431.8 252 87.3
Glyma.10G187300 Glycine max HOM05D006457 ORTHO05D008275 4.7e-119 431.4 252 87.7
TPR.G26440 Trifolium pratense HOM05D006457 ORTHO05D008275 8.1e-119 430.6 252 86.9
Atru.chr4.2091 Acer truncatum HOM05D006457 ORTHO05D008275 1.1e-118 430.3 252 86.5
Lj5g0021789 Lotus japonicus HOM05D006457 ORTHO05D008275 1.1e-118 430.3 252 87.7
Sc19g0003600 Simmondsia chinensis HOM05D006457 ORTHO05D008275 1.4e-118 429.9 252 85.3
PGR031G3937 Punica granatum HOM05D006457 ORTHO05D008275 2.4e-118 429.1 252 86.9
Manes.03G165500 Manihot esculenta HOM05D006457 ORTHO05D008275 4.0e-118 428.3 252 86.1
FvH4_4g03430 Fragaria vesca HOM05D006457 ORTHO05D008275 5.2e-118 427.9 252 86.5
Glyma.20G203200 Glycine max HOM05D006457 ORTHO05D008275 5.2e-118 427.9 252 86.5
Ciclev10005707m.g Citrus clementina HOM05D006457 ORTHO05D008275 8.9e-118 427.2 252 86.1
MD13G1212500 Malus domestica HOM05D006457 ORTHO05D008275 1.2e-117 426.8 252 86.9
TAR636G2559 Trochodendron aralioides HOM05D006457 ORTHO05D008275 1.2e-117 426.8 252 86.9
Medtr1g074170 Medicago truncatula HOM05D006457 ORTHO05D008275 2.0e-117 426.0 252 84.9
Nn3g19624 Nelumbo nucifera HOM05D006457 ORTHO05D008275 2.0e-117 426.0 252 86.9
FAN22G0441 Fragaria x ananassa HOM05D006457 ORTHO05D008275 3.4e-117 425.2 252 86.9
VMungo0720G2635 Vigna mungo HOM05D006457 ORTHO05D008275 4.4e-117 424.9 252 85.7
THA.LOC104801088 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 5.8e-117 424.5 252 82.9
ECA233G3697 Erigeron canadensis HOM05D006457 ORTHO05D008275 7.6e-117 424.1 250 84.8
RcHm_v2.0_Chr4g0392411 Rosa chinensis HOM05D006457 ORTHO05D008275 9.9e-117 423.7 252 86.9
Hund03034 Selenicereus undatus HOM05D006457 ORTHO05D008275 9.9e-117 423.7 252 84.5
Ah.04g156060 Amaranthus hybridus HOM05D006457 ORTHO05D008275 1.7e-116 422.9 254 85.4
CSS0034990 Camellia sinensis var. sinensis HOM05D006457 ORTHO05D008275 1.7e-116 422.9 252 83.7
Sp2g08310 Schrenkiella parvula HOM05D006457 ORTHO05D008275 2.2e-116 422.5 252 84.1
Psat6g128760 Pisum sativum HOM05D006457 ORTHO05D008275 2.9e-116 422.2 252 84.9
Thhalv10003253m.g Eutrema salsugineum HOM05D006457 ORTHO05D008275 4.9e-116 421.4 252 83.3
vmacro15431 Vaccinium macrocarpon HOM05D006457 ORTHO05D008275 4.9e-116 421.4 252 85.3
CARHR180150 Cardamine hirsuta HOM05D006457 ORTHO05D008275 6.4e-116 421.0 252 82.1
EL10Ac3g05029 Beta vulgaris HOM05D006457 ORTHO05D008275 8.4e-116 420.6 254 84.6
Lalb_Chr02g0150531 Lupinus albus HOM05D006457 ORTHO05D008275 8.4e-116 420.6 252 84.1
Phvul.007G128300 Phaseolus vulgaris HOM05D006457 ORTHO05D008275 1.4e-115 419.9 252 84.5
Rhsim02G0036100 Rhododendron simsii HOM05D006457 ORTHO05D008275 1.9e-115 419.5 252 85.3
AUR62002111 Chenopodium quinoa HOM05D006457 ORTHO05D008275 3.2e-115 418.7 253 85.4
Lsat_1_v5_gn_5_72441 Lactuca sativa HOM05D006457 ORTHO05D008275 3.2e-115 418.7 249 85.5
Actinidia39894 Actinidia chinensis HOM05D006457 ORTHO05D008275 4.2e-115 418.3 252 83.3
Eucgr.H00173 Eucalyptus grandis HOM05D006457 ORTHO05D008275 4.2e-115 418.3 252 85.3
Carub.0008s0516 Capsella rubella HOM05D006457 ORTHO05D008275 5.4e-115 417.9 252 81.3
Ca_09820_v3 Cicer arietinum L. HOM05D006457 ORTHO05D008275 5.4e-115 417.9 281 78.3
BcaC04g21915 Brassica carinata HOM05D006457 ORTHO05D008275 9.2e-115 417.2 252 82.9
HanXRQChr05g0134481 Helianthus annuus HOM05D006457 ORTHO05D008275 1.6e-114 416.4 252 84.1
AT5G43430 Arabidopsis thaliana HOM05D006457 ORTHO05D008275 2.1e-114 416.0 252 81.7
AL8G16870 Arabidopsis lyrata HOM05D006457 ORTHO05D008275 2.7e-114 415.6 252 81.3
MSTRG.9902 Avicennia marina HOM05D006457 ORTHO05D008275 4.6e-114 414.8 252 84.5
Nitab4.5_0003897g0020 Nicotiana tabacum HOM05D006457 ORTHO05D008275 6.0e-114 414.5 252 83.7
Peaxi162Scf00024g02411 Petunia axillaris HOM05D006457 ORTHO05D008275 6.0e-114 414.5 252 83.7
Cc03_g05380 Coffea canephora HOM05D006457 ORTHO05D008275 7.8e-114 414.1 252 83.3
MBI18_g15334_MAGBIO Magnolia biondii HOM05D006457 ORTHO05D008275 7.8e-114 414.1 252 83.3
Nitab4.5_0000342g0030 Nicotiana tabacum HOM05D006457 ORTHO05D008275 7.8e-114 414.1 252 83.7
DCAR_027307 Daucus carota HOM05D006457 ORTHO05D008275 1.0e-113 413.7 252 83.3
Solyc09g089880.3 Solanum lycopersicum HOM05D006457 ORTHO05D008275 1.0e-113 413.7 252 83.3
BolC9t55493H Brassica oleracea HOM05D006457 ORTHO05D008275 1.3e-113 413.3 250 83.2
Lj6A662T59 Lonicera japonica HOM05D006457 ORTHO05D008275 1.3e-113 413.3 253 83.4
arahy.Tifrunner.gnm1.ann1.YH23E2 Arachis hypogaea HOM05D006457 ORTHO05D008275 3.0e-113 412.1 250 82.4
FAN17G1464 Fragaria x ananassa HOM05D006457 ORTHO05D008275 3.0e-113 412.1 252 85.3
PGSC0003DMG400017180 Solanum tuberosum HOM05D006457 ORTHO05D008275 3.0e-113 412.1 252 82.9
arahy.Tifrunner.gnm1.ann1.AG4MDC Arachis hypogaea HOM05D006457 ORTHO05D008275 3.9e-113 411.8 252 82.1
CAN.G793.35 Capsicum annuum HOM05D006457 ORTHO05D008275 3.9e-113 411.8 252 82.5
Sabra08G0126300 Salix brachista HOM05D006457 ORTHO05D008275 3.9e-113 411.8 283 76.0
Aa31LG5G3680 Aethionema arabicum HOM05D006457 ORTHO05D008275 5.1e-113 411.4 252 80.2
BcaB07g31008 Brassica carinata HOM05D006457 ORTHO05D008275 5.1e-113 411.4 254 82.3
PSO210G6447 Papaver somniferum HOM05D006457 ORTHO05D008275 5.1e-113 411.4 256 82.8
PSO832G2062 Papaver somniferum HOM05D006457 ORTHO05D008275 5.1e-113 411.4 256 82.4
A09p20470 Brassica napus HOM05D006457 ORTHO05D008275 6.6e-113 411.0 250 82.8
C09p25850 Brassica napus HOM05D006457 ORTHO05D008275 1.5e-112 409.8 250 82.8
Sopen09g032820 Solanum pennellii HOM05D006457 ORTHO05D008275 2.5e-112 409.1 252 83.3
Aqoxy5G00253 Aquilegia oxysepala HOM05D006457 ORTHO05D008275 9.6e-112 407.1 260 81.5
BraA09t37652Z Brassica rapa HOM05D006457 ORTHO05D008275 1.8e-110 402.9 260 79.6
Migut.N00260 Erythranthe guttata HOM05D006457 ORTHO05D008275 4.0e-110 401.7 252 81.0
HPP92_025980 Vanilla planifolia HOM05D006457 ORTHO05D008275 1.5e-109 399.8 253 79.4
ATR0680G075 Amborella trichopoda HOM05D006457 ORTHO05D008275 3.4e-109 398.7 252 80.6
Dinv27040 Davidia involucrata HOM05D006457 ORTHO05D008275 9.9e-109 397.1 239 84.1
SGA_v2.0_scaffold67G22771 Striga asiatica HOM05D006457 ORTHO05D008275 2.2e-108 396.0 283 74.6
SEGI_23974 Sequoiadendron giganteum HOM05D006457 ORTHO05D008275 1.1e-104 383.6 252 78.2
Os04g0182800 Oryza sativa ssp. japonica HOM05D006457 ORTHO05D008275 1.6e-103 379.8 256 75.4
Zm00001eb419600 Zea mays HOM05D006457 ORTHO05D008275 6.9e-102 374.4 256 73.8
FAN12G4283 Fragaria x ananassa HOM05D006457 ORTHO05D008275 2.6e-101 372.5 272 74.3
Gohir.D09G057800 Gossypium hirsutum HOM05D006457 ORTHO05D008275 3.8e-100 368.6 190 99.5
AUR62028231 Chenopodium quinoa HOM05D006457 ORTHO05D008275 5.4e-99 364.8 221 84.2
SMO145G0254 Selaginella moellendorffii HOM05D006457 ORTHO05D008275 6.0e-98 361.3 254 72.8
Pp3c16_12620 Physcomitrium patens HOM05D006457 ORTHO05D008275 3.0e-97 359.0 252 73.0
SHI00666 Sapria himalayana HOM05D006457 ORTHO05D008275 1.9e-96 356.3 267 69.7
AagrBONN_evm.TU.Sc2ySwM_228.708 Anthoceros agrestis HOM05D006457 ORTHO05D008275 3.1e-94 349.0 252 71.8
TWI73G0230 Tripterygium wilfordii HOM05D006457 ORTHO05D008275 3.1e-94 349.0 252 73.8
Cpa.g.sc44.77 Carica papaya HOM05D006457 ORTHO05D008275 4.0e-94 348.6 260 71.5
Mapoly0061s0138 Marchantia polymorpha HOM05D006457 ORTHO05D008275 4.5e-93 345.1 252 70.2
SalBow3G1824 Salvia bowleyana HOM05D006457 ORTHO05D008275 2.9e-84 315.8 274 66.1
THA.LOC104826077 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 1.1e-83 313.9 229 70.7
CiPaw.02G113800 Carya illinoinensis HOM05D006457 ORTHO05D008275 3.5e-82 308.9 177 89.3
unitig_748.g7323 Utricularia gibba HOM05D006457 ORTHO05D008275 1.0e-81 307.4 191 81.2
Haze_27028 Corylus avellana HOM05D006457 ORTHO05D008275 1.1e-80 303.9 252 63.5
Hma1.2p1_0267F.1_g107350 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 2.5e-80 302.8 176 85.2
Dinv29877 Davidia involucrata HOM05D006457 ORTHO05D008275 4.3e-80 302.0 177 85.3
PRCOL_00002410 Prasinoderma coloniale HOM05D006457 ORTHO05D008275 1.2e-74 283.9 255 58.0
Cre12.g554953 Chlamydomonas reinhardtii HOM05D006457 ORTHO05D008275 6.1e-74 281.6 278 55.4
Haze_27526 Corylus avellana HOM05D006457 ORTHO05D008275 3.0e-65 252.7 252 56.7
CANSAT78G2507 Cannabis sativa HOM05D006457 ORTHO05D008275 1.3e-63 247.3 145 84.1
Haze_26122 Corylus avellana HOM05D006457 ORTHO05D008275 2.8e-63 246.1 254 51.6
CDE05G1545 Ceratophyllum demersum HOM05D006457 ORTHO05D008275 1.9e-59 233.4 146 79.5
Cfa021602 Carpinus fangiana HOM05D006457 ORTHO05D008275 1.5e-56 223.8 254 47.6
Zm00001eb087650 Zea mays HOM05D006457 ORTHO05D008275 1.8e-49 200.3 123 79.7
MD16G1216100 Malus domestica HOM05D006457 ORTHO05D008275 9.5e-35 151.4 91 82.4
Oeu011992.1 Olea europaea HOM05D006457 ORTHO05D008275 2.8e-34 149.8 86 86.0
HanXRQChr03g0066771 Helianthus annuus HOM05D006457 ORTHO05D008275 3.0e-33 146.4 96 74.0
Oeu063893.1 Olea europaea HOM05D006457 ORTHO05D000397 5.8e-24 115.5 86 67.4
Hma1.2p1_0267F.1_g107370 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 3.4e-16 89.7 48 93.8
MBI15_g29425_MAGBIO Magnolia biondii HOM05D016614 ORTHO05D012466 3.7e-15 86.3 62 66.1
VMungo0720G2370 Vigna mungo HOM05D006457 ORTHO05D008275 8.1e-10 68.6 48 68.8
RcHm_v2.0_Chr5g0058341 Rosa chinensis HOM05D006457 ORTHO05D008275 4.0e-09 66.2 34 82.4


User provided reference genes

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