Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.006G069100 Gossypium raimondii HOM05D002629 ORTHO05D003221 8.2e-94 347.1 175 100.0
Gohir.D01G171200 Gossypium hirsutum HOM05D002629 ORTHO05D003221 4.6e-89 331.3 175 96.0
Gohir.D11G042900 Gossypium hirsutum HOM05D002629 ORTHO05D003221 1.6e-44 183.3 97 96.9
Gohir.A11G039600 Gossypium hirsutum HOM05D002629 ORTHO05D003221 2.3e-43 179.5 97 93.8
Gorai.007G046200 Gossypium raimondii HOM05D002629 ORTHO05D003221 2.9e-43 179.1 97 94.8
Oeu063227.1 Olea europaea HOM05D002629 ORTHO05D003221 9.5e-42 174.1 137 62.0
Cpa.g.sc101.20 Carica papaya HOM05D002629 ORTHO05D003221 4.7e-41 171.8 135 64.4
Ah.05g173240 Amaranthus hybridus HOM05D002629 ORTHO05D003221 1.2e-39 167.2 151 60.3
Haze_02816 Corylus avellana HOM05D002629 ORTHO05D003221 1.5e-39 166.8 139 60.4
Hund27403 Selenicereus undatus HOM05D002629 ORTHO05D003221 2.6e-39 166.0 135 63.7
COL.COLO4_37342 Corchorus olitorius HOM05D002629 ORTHO05D003221 2.9e-38 162.5 101 81.2
Thecc.03G149100 Theobroma cacao HOM05D002629 ORTHO05D003221 1.8e-37 159.8 97 85.6
Rhsim01G0138900 Rhododendron simsii HOM05D002629 ORTHO05D003221 2.4e-37 159.5 130 61.5
Duzib068G1177 Durio zibethinus HOM05D002629 ORTHO05D003221 9.2e-37 157.5 96 84.4
CDE04G1047 Ceratophyllum demersum HOM05D002629 ORTHO05D003221 4.6e-36 155.2 135 59.3
Gohir.A03G059800 Gossypium hirsutum HOM05D002629 ORTHO05D003221 1.7e-35 153.3 96 82.3
BcaB01g03300 Brassica carinata HOM05D002629 ORTHO05D003221 3.9e-35 152.1 164 51.2
Oeu031412.1 Olea europaea HOM05D001586 ORTHO05D001543 4.4e-31 138.7 135 52.6
Pp3s1164_10 Physcomitrium patens HOM05D002629 ORTHO05D003221 2.4e-29 132.9 123 52.8
Peaxi162Scf00030g00516 Petunia axillaris HOM05D002629 ORTHO05D003221 7.0e-29 131.3 174 44.3
MSTRG.20699 Avicennia marina HOM05D002629 ORTHO05D003221 2.0e-28 129.8 137 50.4
Nn1g00881 Nelumbo nucifera HOM05D002629 ORTHO05D003221 2.7e-28 129.4 108 63.0
arahy.Tifrunner.gnm1.ann1.NJU9W5 Arachis hypogaea HOM05D002629 ORTHO05D003221 1.0e-27 127.5 174 43.7
vmacro21053 Vaccinium macrocarpon HOM05D002629 ORTHO05D003221 1.7e-27 126.7 101 63.4
Migut.B01547 Erythranthe guttata HOM05D002629 ORTHO05D003221 3.0e-27 125.9 137 49.6
Actinidia33500 Actinidia chinensis HOM05D002629 ORTHO05D003221 6.6e-27 124.8 101 62.4
COL.COLO4_12423 Corchorus olitorius HOM05D002629 ORTHO05D003221 6.6e-27 124.8 99 62.6
Actinidia12648 Actinidia chinensis HOM05D002629 ORTHO05D003221 8.6e-27 124.4 101 61.4
Cc02_g24970 Coffea canephora HOM05D002629 ORTHO05D003221 1.1e-26 124.0 113 55.8
FAN06G1336 Fragaria x ananassa HOM05D002629 ORTHO05D003221 1.1e-26 124.0 100 65.0
Gohir.D08G040400 Gossypium hirsutum HOM05D002629 ORTHO05D003221 1.1e-26 124.0 99 63.6
Aqoxy3G02758 Aquilegia oxysepala HOM05D002629 ORTHO05D003221 1.5e-26 123.6 99 64.6
CiPaw.14G021300 Carya illinoinensis HOM05D002629 ORTHO05D003221 1.5e-26 123.6 99 63.6
Lj7A544T39 Lonicera japonica HOM05D002629 ORTHO05D003221 1.5e-26 123.6 174 42.5
CSS0031736 Camellia sinensis var. sinensis HOM05D002629 ORTHO05D003221 3.3e-26 122.5 101 61.4
Gohir.A08G029600 Gossypium hirsutum HOM05D002629 ORTHO05D003221 3.3e-26 122.5 99 62.6
Aa31LG10G14470 Aethionema arabicum HOM05D002629 ORTHO05D003221 5.6e-26 121.7 102 59.8
CAN.G362.8 Capsicum annuum HOM05D002629 ORTHO05D003221 5.6e-26 121.7 99 62.6
Nn6g33838 Nelumbo nucifera HOM05D002629 ORTHO05D003221 5.6e-26 121.7 98 64.3
TAR374G0587 Trochodendron aralioides HOM05D002629 ORTHO05D003221 5.6e-26 121.7 100 63.0
EL10Ac1g00777 Beta vulgaris HOM05D002629 ORTHO05D003221 9.5e-26 120.9 99 63.6
CiPaw.13G027700 Carya illinoinensis HOM05D002629 ORTHO05D003221 9.5e-26 120.9 99 62.6
Dinv43631 Davidia involucrata HOM05D002629 ORTHO05D003221 9.5e-26 120.9 99 61.6
Dinv44071 Davidia involucrata HOM05D002629 ORTHO05D003221 9.5e-26 120.9 99 61.6
Atru.chr5.154 Acer truncatum HOM05D002629 ORTHO05D003221 1.2e-25 120.6 99 61.6
CANSAT81G0002 Cannabis sativa HOM05D002629 ORTHO05D003221 1.2e-25 120.6 99 63.6
GSVIVG01018254001 Vitis vinifera HOM05D002629 ORTHO05D003221 1.2e-25 120.6 99 59.6
CSS0010116 Camellia sinensis var. sinensis HOM05D002629 ORTHO05D003221 1.6e-25 120.2 100 60.0
FAN06G2173 Fragaria x ananassa HOM05D002629 ORTHO05D003221 1.6e-25 120.2 98 64.3
Phvul.008G045600 Phaseolus vulgaris HOM05D002629 ORTHO05D003221 1.6e-25 120.2 99 63.6
FAN10G1673 Fragaria x ananassa HOM05D002629 ORTHO05D003221 2.1e-25 119.8 98 63.3
FAN10G1881 Fragaria x ananassa HOM05D002629 ORTHO05D003221 2.1e-25 119.8 98 63.3
Os10g0563200 Oryza sativa ssp. japonica HOM05D002629 ORTHO05D003221 2.1e-25 119.8 100 60.0
QL04p030868 Quercus lobata HOM05D002629 ORTHO05D003221 2.1e-25 119.8 99 61.6
Gorai.004G039300 Gossypium raimondii HOM05D002629 ORTHO05D003221 2.8e-25 119.4 100 63.0
Potri.002G137100 Populus trichocarpa HOM05D002629 ORTHO05D003221 2.8e-25 119.4 99 61.6
Sabra02G0106100 Salix brachista HOM05D002629 ORTHO05D003221 2.8e-25 119.4 99 61.6
Potri.014G046000 Populus trichocarpa HOM05D002629 ORTHO05D003221 3.6e-25 119.0 99 60.6
Sed0006090 Sechium edule HOM05D002629 ORTHO05D003221 3.6e-25 119.0 101 59.4
Sed0010164 Sechium edule HOM05D002629 ORTHO05D003221 3.6e-25 119.0 101 60.4
VMungo1383G0712 Vigna mungo HOM05D002629 ORTHO05D003221 3.6e-25 119.0 99 62.6
Zm00001eb023660 Zea mays HOM05D002629 ORTHO05D003221 3.6e-25 119.0 102 58.8
MD07G1104300 Malus domestica HOM05D002629 ORTHO05D003221 4.7e-25 118.6 98 62.2
Sc02g0003040 Simmondsia chinensis HOM05D002629 ORTHO05D003221 6.2e-25 118.2 99 62.6
arahy.Tifrunner.gnm1.ann1.Z4V8RQ Arachis hypogaea HOM05D002629 ORTHO05D003221 8.1e-25 117.9 99 61.6
ClCG05G000420 Citrullus lanatus HOM05D002629 ORTHO05D003221 8.1e-25 117.9 101 59.4
MELO3C005980.2 Cucumis melo HOM05D002629 ORTHO05D003221 8.1e-25 117.9 101 59.4
CsaV3_3G007580 Cucumis sativus L. HOM05D002629 ORTHO05D003221 8.1e-25 117.9 101 59.4
FAN03G1771 Fragaria x ananassa HOM05D002629 ORTHO05D003221 8.1e-25 117.9 98 62.2
RcHm_v2.0_Chr1g0347431 Rosa chinensis HOM05D002629 ORTHO05D003221 8.1e-25 117.9 98 63.3
Thhalv10001300m.g Eutrema salsugineum HOM05D002629 ORTHO05D003221 1.1e-24 117.5 99 60.6
vmacro13487 Vaccinium macrocarpon HOM05D002629 ORTHO05D003221 1.4e-24 117.1 133 48.1
Migut.N01752 Erythranthe guttata HOM05D002629 ORTHO05D003221 1.8e-24 116.7 99 58.6
Glyma.18G253400 Glycine max HOM05D002629 ORTHO05D003221 1.8e-24 116.7 99 62.6
MD02G1216100 Malus domestica HOM05D002629 ORTHO05D003221 1.8e-24 116.7 98 61.2
Manes.01G272500 Manihot esculenta HOM05D002629 ORTHO05D003221 1.8e-24 116.7 99 59.6
SGA_v2.0_scaffold153G36913 Striga asiatica HOM05D002629 ORTHO05D003221 1.8e-24 116.7 137 44.5
THA.LOC104817192 Tarenaya hassleriana HOM05D002629 ORTHO05D003221 1.8e-24 116.7 98 63.3
Actinidia40386 Actinidia chinensis HOM05D002629 ORTHO05D003221 2.3e-24 116.3 134 47.0
Ciclev10018755m.g Citrus clementina HOM05D002629 ORTHO05D003221 2.3e-24 116.3 99 58.6
FvH4_7g09880 Fragaria vesca HOM05D002629 ORTHO05D003221 2.3e-24 116.3 98 63.3
Solyc01g090420.4 Solanum lycopersicum HOM05D002629 ORTHO05D003221 2.3e-24 116.3 96 61.5
THA.LOC104802491 Tarenaya hassleriana HOM05D002629 ORTHO05D003221 2.3e-24 116.3 98 58.2
HPP92_014909 Vanilla planifolia HOM05D002629 ORTHO05D003221 3.1e-24 115.9 99 59.6
PGR004G2363 Punica granatum HOM05D002629 ORTHO05D003221 4.0e-24 115.5 101 58.4
Thecc.01G393100 Theobroma cacao HOM05D002629 ORTHO05D003221 4.0e-24 115.5 99 62.6
GSVIVG01013967001 Vitis vinifera HOM05D002629 ORTHO05D003221 4.0e-24 115.5 101 60.4
Atru.chr1.908 Acer truncatum HOM05D002629 ORTHO05D003221 5.2e-24 115.2 97 62.9
PSO063G0076 Papaver somniferum HOM05D002629 ORTHO05D003221 5.2e-24 115.2 99 61.6
Psat3g195880 Pisum sativum HOM05D002629 ORTHO05D003221 5.2e-24 115.2 99 61.6
BcaB06g29404 Brassica carinata HOM05D002629 ORTHO05D003221 6.8e-24 114.8 100 61.0
Duzib133G0660 Durio zibethinus HOM05D002629 ORTHO05D003221 6.8e-24 114.8 99 60.6
PSO782G2159 Papaver somniferum HOM05D002629 ORTHO05D003221 6.8e-24 114.8 99 60.6
TPR.G12223 Trifolium pratense HOM05D002629 ORTHO05D003221 6.8e-24 114.8 99 61.6
Aa31LG1G26430 Aethionema arabicum HOM05D002629 ORTHO05D003221 1.2e-23 114.0 99 59.6
BcaC02g10150 Brassica carinata HOM05D002629 ORTHO05D003221 1.2e-23 114.0 98 59.2
A04p01670 Brassica napus HOM05D002629 ORTHO05D003221 1.2e-23 114.0 98 59.2
C04p32220 Brassica napus HOM05D002629 ORTHO05D003221 1.2e-23 114.0 98 59.2
BolC4t24773H Brassica oleracea HOM05D002629 ORTHO05D003221 1.2e-23 114.0 98 59.2
CARHR140140 Cardamine hirsuta HOM05D002629 ORTHO05D003221 1.2e-23 114.0 98 58.2
Duzib138G1927 Durio zibethinus HOM05D002629 ORTHO05D003221 1.2e-23 114.0 99 61.6
Thhalv10005776m.g Eutrema salsugineum HOM05D002629 ORTHO05D003221 1.2e-23 114.0 99 58.6
Lsat_1_v5_gn_3_131781 Lactuca sativa HOM05D002629 ORTHO05D003221 1.2e-23 114.0 99 59.6
Lalb_Chr03g0040291 Lupinus albus HOM05D002629 ORTHO05D003221 1.2e-23 114.0 98 61.2
Nitab4.5_0003696g0020 Nicotiana tabacum HOM05D002629 ORTHO05D003221 1.2e-23 114.0 98 60.2
Sp4g26970 Schrenkiella parvula HOM05D002629 ORTHO05D003221 1.2e-23 114.0 98 59.2
Eucgr.D01517 Eucalyptus grandis HOM05D002629 ORTHO05D003221 1.5e-23 113.6 99 59.6
HanXRQChr13g0423391 Helianthus annuus HOM05D002629 ORTHO05D003221 1.5e-23 113.6 99 58.6
DCAR_029753 Daucus carota HOM05D002629 ORTHO05D003221 2.0e-23 113.2 98 60.2
SpUN0080_0050 Schrenkiella parvula HOM05D002629 ORTHO05D003221 2.0e-23 113.2 99 59.6
Sopen01g036210 Solanum pennellii HOM05D002629 ORTHO05D003221 2.0e-23 113.2 96 60.4
BcaB02g08173 Brassica carinata HOM05D002629 ORTHO05D003221 2.6e-23 112.8 98 57.1
FAN06G0846 Fragaria x ananassa HOM05D002629 ORTHO05D003221 2.6e-23 112.8 108 57.4
SalBow5G1432 Salvia bowleyana HOM05D002629 ORTHO05D003221 2.6e-23 112.8 100 57.0
Sabra14G0033500 Salix brachista HOM05D002629 ORTHO05D003221 3.4e-23 112.5 98 59.2
Carub.0004s2749 Capsella rubella HOM05D002629 ORTHO05D003221 7.5e-23 111.3 99 56.6
Glyma.09G242200 Glycine max HOM05D002629 ORTHO05D003221 7.5e-23 111.3 99 60.6
MSTRG.4927 Avicennia marina HOM05D002629 ORTHO05D003221 1.3e-22 110.5 96 56.2
AL4G43990 Arabidopsis lyrata HOM05D002629 ORTHO05D003221 1.7e-22 110.2 98 56.1
AT2G44900 Arabidopsis thaliana HOM05D002629 ORTHO05D003221 1.7e-22 110.2 98 56.1
BraA04t15891Z Brassica rapa HOM05D002629 ORTHO05D003221 1.7e-22 110.2 98 58.2
Ca_04037_v3 Cicer arietinum L. HOM05D002629 ORTHO05D003221 1.7e-22 110.2 99 59.6
Gohir.A08G059100 Gossypium hirsutum HOM05D002629 ORTHO05D003221 1.7e-22 110.2 101 56.4
Gohir.D08G068300 Gossypium hirsutum HOM05D002629 ORTHO05D003221 1.7e-22 110.2 101 56.4
Gorai.004G071500 Gossypium raimondii HOM05D002629 ORTHO05D003221 1.7e-22 110.2 101 56.4
ECA240G2280 Erigeron canadensis HOM05D002629 ORTHO05D003221 2.2e-22 109.8 99 56.6
TAR375G0872 Trochodendron aralioides HOM05D002629 ORTHO05D003221 2.2e-22 109.8 99 58.6
AL5G42590 Arabidopsis lyrata HOM05D002629 ORTHO05D003221 2.9e-22 109.4 99 55.6
Medtr7g007780 Medicago truncatula HOM05D002629 ORTHO05D003221 2.9e-22 109.4 98 60.2
TAR375G0449 Trochodendron aralioides HOM05D002629 ORTHO05D003221 6.4e-22 108.2 99 57.6
A04p33530 Brassica napus HOM05D002629 ORTHO05D003221 8.3e-22 107.8 96 56.2
Carub.0005s2710 Capsella rubella HOM05D002629 ORTHO05D003221 8.3e-22 107.8 98 57.1
Lalb_Chr19g0126581 Lupinus albus HOM05D002629 ORTHO05D003221 8.3e-22 107.8 98 61.2
Manes.14G038600 Manihot esculenta HOM05D002629 ORTHO05D003221 1.1e-21 107.5 101 55.4
Aqoxy7G00845 Aquilegia oxysepala HOM05D002629 ORTHO05D003221 1.4e-21 107.1 96 59.4
C04p71290 Brassica napus HOM05D002629 ORTHO05D003221 1.4e-21 107.1 96 56.2
BolC4t28633H Brassica oleracea HOM05D002629 ORTHO05D003221 1.4e-21 107.1 96 56.2
BraA04t18815Z Brassica rapa HOM05D002629 ORTHO05D003221 1.4e-21 107.1 96 56.2
Sabra01G0056800 Salix brachista HOM05D002629 ORTHO05D003221 1.4e-21 107.1 94 58.5
Potri.001G079300 Populus trichocarpa HOM05D002629 ORTHO05D003221 3.2e-21 105.9 96 57.3
TWI59G0861 Tripterygium wilfordii HOM05D002629 ORTHO05D003221 3.2e-21 105.9 99 55.6
AT3G60350 Arabidopsis thaliana HOM05D002629 ORTHO05D003221 7.1e-21 104.8 99 54.5
CDE12G0117 Ceratophyllum demersum HOM05D002629 ORTHO05D003221 9.2e-21 104.4 96 58.3
TWI14G0886 Tripterygium wilfordii HOM05D002629 ORTHO05D003221 9.2e-21 104.4 99 55.6
TWI14G1152 Tripterygium wilfordii HOM05D002629 ORTHO05D003221 9.2e-21 104.4 99 55.6
SEGI_03510 Sequoiadendron giganteum HOM05D002629 ORTHO05D003221 1.2e-20 104.0 98 54.1
BcaC02g07120 Brassica carinata HOM05D002629 ORTHO05D003221 1.6e-20 103.6 97 57.7
DCAR_025070 Daucus carota HOM05D002629 ORTHO05D003221 2.1e-20 103.2 150 36.0
Lj1g0021466 Lotus japonicus HOM05D002629 ORTHO05D003221 2.1e-20 103.2 100 56.0
Actinidia12151 Actinidia chinensis HOM05D002629 ORTHO05D003221 3.5e-20 102.4 96 54.2
vmacro21167 Vaccinium macrocarpon HOM05D002629 ORTHO05D003221 7.8e-20 101.3 82 62.2
Pp3c12_9730 Physcomitrium patens HOM05D002629 ORTHO05D003221 1.0e-19 100.9 137 40.1
Pp3c4_17860 Physcomitrium patens HOM05D002629 ORTHO05D003221 1.3e-19 100.5 106 50.9
CARHR170670 Cardamine hirsuta HOM05D002629 ORTHO05D003221 3.9e-19 99.0 101 51.5
Nitab4.5_0003553g0060 Nicotiana tabacum HOM05D002629 ORTHO05D003221 6.6e-19 98.2 128 46.1
AagrBONN_evm.TU.Sc2ySwM_117.2598 Anthoceros agrestis HOM05D002629 ORTHO05D003221 8.6e-19 97.8 101 48.5
unitig_26.g8869 Utricularia gibba HOM05D002629 ORTHO05D003221 1.1e-18 97.4 94 51.1
QL04p030794 Quercus lobata HOM05D002629 ORTHO05D003221 1.9e-18 96.7 134 43.3
TPR.G32620 Trifolium pratense HOM05D002629 ORTHO05D003221 7.3e-18 94.7 100 52.0
BcaC07g42772 Brassica carinata HOM05D002629 ORTHO05D003221 1.6e-17 93.6 126 42.9
Mapoly0150s0009 Marchantia polymorpha HOM05D002629 ORTHO05D003221 1.4e-16 90.5 99 45.5
BcaC07g40426 Brassica carinata HOM05D002629 ORTHO05D003221 8.9e-16 87.8 103 42.7
A09p52630 Brassica napus HOM05D002629 ORTHO05D003221 1.2e-15 87.4 137 33.6
BcaNung06045 Brassica carinata HOM05D002629 ORTHO05D003221 4.4e-15 85.5 136 33.1
C08p35360 Brassica napus HOM05D002629 ORTHO05D003221 4.4e-15 85.5 136 33.1
BolC8t51129H Brassica oleracea HOM05D002629 ORTHO05D003221 4.4e-15 85.5 136 33.1
Gohir.A12G096550 Gossypium hirsutum HOM05D002629 ORTHO05D003221 4.4e-15 85.5 138 38.4
BraA09t40692Z Brassica rapa HOM05D002629 ORTHO05D003221 9.9e-15 84.3 103 40.8
SMO143G0319 Selaginella moellendorffii HOM05D002629 ORTHO05D003221 8.4e-14 81.3 101 47.5
ATR0057G096 Amborella trichopoda HOM05D002629 ORTHO05D003221 1.4e-13 80.5 99 44.4
Gorai.008G108200 Gossypium raimondii HOM05D002629 ORTHO05D003221 2.4e-13 79.7 138 37.7
BcaC07g40428 Brassica carinata HOM05D002629 ORTHO05D003221 7.1e-13 78.2 103 39.8
BcaC07g40430 Brassica carinata HOM05D002629 ORTHO05D003221 9.2e-13 77.8 103 38.8
SEGI_18219 Sequoiadendron giganteum HOM05D002629 ORTHO05D003221 1.3e-11 73.9 60 55.0
AUR62013732 Chenopodium quinoa HOM05D002629 ORTHO05D003221 1.7e-11 73.6 81 53.1
AUR62023421 Chenopodium quinoa HOM05D002629 ORTHO05D003221 5.1e-11 72.0 58 65.5
C03p29750 Brassica napus HOM05D002629 ORTHO05D003221 8.6e-11 71.2 63 55.6
Ciclev10004368m.g Citrus clementina HOM05D002629 ORTHO05D003221 1.1e-10 70.9 64 54.7
FAN01G1804 Fragaria x ananassa HOM05D002629 ORTHO05D003221 2.5e-10 69.7 59 62.7
BolC3t15325H Brassica oleracea HOM05D002629 ORTHO05D003221 3.3e-10 69.3 63 54.0
TWI59G0032 Tripterygium wilfordii HOM05D002629 ORTHO05D003221 2.1e-09 66.6 76 44.7
Gohir.D12G099366 Gossypium hirsutum HOM05D002629 ORTHO05D003221 4.0e-08 62.4 92 41.3
vmacro13490 Vaccinium macrocarpon HOM05D002629 ORTHO05D003221 5.2e-08 62.0 84 41.7
HanXRQChr03g0093221 Helianthus annuus HOM05D002629 ORTHO05D003221 6.4e-06 55.1 85 36.5


User provided reference genes

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