Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.006G061900 Gossypium raimondii HOM05D005747 ORTHO05D007159 7.2e-53 210.3 105 100.0
Gohir.D09G143100 Gossypium hirsutum HOM05D005747 ORTHO05D007159 6.1e-44 180.6 109 87.2
Gorai.006G164600 Gossypium raimondii HOM05D005747 ORTHO05D007159 6.1e-44 180.6 109 87.2
Gohir.A09G147500 Gossypium hirsutum HOM05D005747 ORTHO05D007159 3.0e-43 178.3 109 86.2
Thecc.05G065200 Theobroma cacao HOM05D005747 ORTHO05D007159 2.6e-39 165.2 109 79.8
Duzib093G2107 Durio zibethinus HOM05D005747 ORTHO05D007159 2.9e-38 161.8 109 78.0
Duzib128G1360 Durio zibethinus HOM05D005747 ORTHO05D007159 3.8e-38 161.4 109 78.9
QL07p043606 Quercus lobata HOM05D005747 ORTHO05D007159 5.7e-34 147.5 108 73.1
TAR369G0407 Trochodendron aralioides HOM05D005747 ORTHO05D007159 5.7e-34 147.5 107 72.0
Glyma.10G057000 Glycine max HOM05D005747 ORTHO05D007159 9.7e-34 146.7 109 69.7
TAR633G0139 Trochodendron aralioides HOM05D005747 ORTHO05D007159 2.8e-33 145.2 107 70.1
Haze_20552 Corylus avellana HOM05D005747 ORTHO05D007159 4.8e-33 144.4 109 70.6
Glyma.13G143500 Glycine max HOM05D005747 ORTHO05D007159 4.8e-33 144.4 109 68.8
PGR004G0006 Punica granatum HOM05D005747 ORTHO05D007159 6.3e-33 144.1 109 67.9
arahy.Tifrunner.gnm1.ann1.548B55 Arachis hypogaea HOM05D005747 ORTHO05D007159 8.2e-33 143.7 109 69.7
Actinidia08777 Actinidia chinensis HOM05D005747 ORTHO05D007159 1.1e-32 143.3 107 71.0
arahy.Tifrunner.gnm1.ann1.GC88CS Arachis hypogaea HOM05D005747 ORTHO05D007159 1.1e-32 143.3 109 68.8
Prupe.6G232700 Prunus persica HOM05D005747 ORTHO05D007159 1.1e-32 143.3 109 67.0
Manes.08G009800 Manihot esculenta HOM05D005747 ORTHO05D007159 1.4e-32 142.9 109 67.9
arahy.Tifrunner.gnm1.ann1.47U1LD Arachis hypogaea HOM05D005747 ORTHO05D007159 1.8e-32 142.5 109 68.8
Cfa020071 Carpinus fangiana HOM05D005747 ORTHO05D007159 1.8e-32 142.5 109 69.7
MD12G1113800 Malus domestica HOM05D005747 ORTHO05D007159 2.4e-32 142.1 109 67.0
TWI74G1168 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 2.4e-32 142.1 109 71.6
arahy.Tifrunner.gnm1.ann1.W5J3RK Arachis hypogaea HOM05D005747 ORTHO05D007159 3.1e-32 141.7 109 68.8
MD04G1094200 Malus domestica HOM05D005747 ORTHO05D007159 9.1e-32 140.2 109 66.1
Hma1.2p1_0205F.1_g087080 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 1.2e-31 139.8 106 69.8
RcHm_v2.0_Chr3g0470141 Rosa chinensis HOM05D005747 ORTHO05D007159 1.2e-31 139.8 107 67.3
THA.LOC104826911 Tarenaya hassleriana HOM05D005747 ORTHO05D007159 2.0e-31 139.0 107 66.4
Actinidia28901 Actinidia chinensis HOM05D005747 ORTHO05D007159 3.5e-31 138.3 107 68.2
Haze_20124 Corylus avellana HOM05D005747 ORTHO05D007159 3.5e-31 138.3 109 67.9
Eucgr.A01688 Eucalyptus grandis HOM05D005747 ORTHO05D007159 3.5e-31 138.3 109 64.2
EL10Ac1g00026 Beta vulgaris HOM05D005747 ORTHO05D007159 4.5e-31 137.9 107 68.2
Ciclev10013173m.g Citrus clementina HOM05D005747 ORTHO05D007159 5.9e-31 137.5 107 68.2
Rhsim03G0092400 Rhododendron simsii HOM05D005747 ORTHO05D007159 5.9e-31 137.5 107 69.2
Migut.L01698 Erythranthe guttata HOM05D005747 ORTHO05D007159 7.7e-31 137.1 107 67.3
Lalb_Chr02g0155891 Lupinus albus HOM05D005747 ORTHO05D007159 7.7e-31 137.1 109 67.0
PSO063G6473 Papaver somniferum HOM05D005747 ORTHO05D007159 7.7e-31 137.1 107 64.5
PSO339G2391 Papaver somniferum HOM05D005747 ORTHO05D007159 7.7e-31 137.1 107 64.5
Lj5g0010104 Lotus japonicus HOM05D005747 ORTHO05D007159 1.0e-30 136.7 109 67.0
TPR.G9369 Trifolium pratense HOM05D005747 ORTHO05D007159 1.7e-30 136.0 109 66.1
GSVIVG01025728001 Vitis vinifera HOM05D005747 ORTHO05D007159 1.7e-30 136.0 109 67.0
CSS0033757 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 2.2e-30 135.6 107 67.3
Psat0s2933g0080 Pisum sativum HOM05D005747 ORTHO05D007159 2.2e-30 135.6 109 66.1
TWI77G0618 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 2.9e-30 135.2 109 68.8
CSS0022084 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 3.8e-30 134.8 107 67.3
vmacro07288 Vaccinium macrocarpon HOM05D005747 ORTHO05D007159 3.8e-30 134.8 107 67.3
Atru.chr8.1820 Acer truncatum HOM05D005747 ORTHO05D007159 5.0e-30 134.4 107 66.4
CSS0033637 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 5.0e-30 134.4 107 67.3
FvH4_6g16280 Fragaria vesca HOM05D005747 ORTHO05D007159 5.0e-30 134.4 107 64.5
FAN14G5754 Fragaria x ananassa HOM05D005747 ORTHO05D007159 5.0e-30 134.4 107 64.5
FAN05G2010 Fragaria x ananassa HOM05D005747 ORTHO05D007159 6.5e-30 134.0 107 64.5
Glyma.19G183500 Glycine max HOM05D005747 ORTHO05D007159 6.5e-30 134.0 109 64.2
FAN09G1333 Fragaria x ananassa HOM05D005747 ORTHO05D007159 1.5e-29 132.9 107 63.6
Phvul.007G149300 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 1.9e-29 132.5 109 64.2
Manes.09G066900 Manihot esculenta HOM05D005747 ORTHO05D007159 3.2e-29 131.7 109 64.2
Sc02g0001670 Simmondsia chinensis HOM05D005747 ORTHO05D007159 3.2e-29 131.7 107 63.6
Dinv37311 Davidia involucrata HOM05D005747 ORTHO05D007159 4.2e-29 131.3 107 68.2
Medtr7g101880 Medicago truncatula HOM05D005747 ORTHO05D007159 4.2e-29 131.3 103 66.0
Psat6g073040 Pisum sativum HOM05D005747 ORTHO05D007159 4.2e-29 131.3 109 64.2
CANSAT80G0760 Cannabis sativa HOM05D005747 ORTHO05D007159 5.5e-29 131.0 109 65.1
Phvul.001G178800 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 5.5e-29 131.0 109 64.2
Aqoxy1G01163 Aquilegia oxysepala HOM05D005747 ORTHO05D007159 7.2e-29 130.6 107 62.6
Nn7g38309 Nelumbo nucifera HOM05D005747 ORTHO05D007159 7.2e-29 130.6 109 66.1
FAN02G1695 Fragaria x ananassa HOM05D005747 ORTHO05D007159 9.4e-29 130.2 107 61.7
Lalb_Chr20g0112621 Lupinus albus HOM05D005747 ORTHO05D007159 1.6e-28 129.4 109 62.4
Peaxi162Scf00701g00029 Petunia axillaris HOM05D005747 ORTHO05D007159 2.1e-28 129.0 107 60.7
Thhalv10015093m.g Eutrema salsugineum HOM05D005747 ORTHO05D007159 2.7e-28 128.6 105 63.8
Solyc09g008140.3 Solanum lycopersicum HOM05D005747 ORTHO05D007159 2.7e-28 128.6 107 60.7
Sopen09g002940 Solanum pennellii HOM05D005747 ORTHO05D007159 2.7e-28 128.6 107 60.7
ClCG10G020160 Citrullus lanatus HOM05D005747 ORTHO05D007159 4.7e-28 127.9 109 60.6
CAN.G900.40 Capsicum annuum HOM05D005747 ORTHO05D007159 6.1e-28 127.5 107 59.8
MSTRG.19175 Avicennia marina HOM05D005747 ORTHO05D007159 8.0e-28 127.1 106 62.3
MELO3C009353.2 Cucumis melo HOM05D005747 ORTHO05D007159 1.4e-27 126.3 109 60.6
CARHR210000 Cardamine hirsuta HOM05D005747 ORTHO05D007159 3.0e-27 125.2 105 61.9
Ca_11494_v3 Cicer arietinum L. HOM05D005747 ORTHO05D007159 3.0e-27 125.2 109 64.2
CsaV3_3G035950 Cucumis sativus L. HOM05D005747 ORTHO05D007159 3.0e-27 125.2 109 59.6
Potri.006G125300 Populus trichocarpa HOM05D005747 ORTHO05D007159 3.0e-27 125.2 107 60.7
Cc06_g04180 Coffea canephora HOM05D005747 ORTHO05D007159 4.0e-27 124.8 107 61.7
VMungo1383G0680 Vigna mungo HOM05D005747 ORTHO05D007159 4.0e-27 124.8 109 62.4
SalBow5G0179 Salvia bowleyana HOM05D005747 ORTHO05D007159 5.2e-27 124.4 107 60.7
SalBow5G1412 Salvia bowleyana HOM05D005747 ORTHO05D007159 5.2e-27 124.4 107 60.7
SGA_v2.0_scaffold75G24844 Striga asiatica HOM05D005747 ORTHO05D007159 5.2e-27 124.4 105 61.0
Ah.05g172440 Amaranthus hybridus HOM05D005747 ORTHO05D007159 8.8e-27 123.6 107 60.7
Aa31LG3G2310 Aethionema arabicum HOM05D005747 ORTHO05D007159 1.5e-26 122.9 107 57.9
AL6G12680 Arabidopsis lyrata HOM05D005747 ORTHO05D007159 2.0e-26 122.5 105 61.0
Carub.0006s0216 Capsella rubella HOM05D005747 ORTHO05D007159 2.6e-26 122.1 105 61.0
Medtr1g063370 Medicago truncatula HOM05D005747 ORTHO05D007159 2.6e-26 122.1 109 59.6
AT5G03345 Arabidopsis thaliana HOM05D005747 ORTHO05D007159 5.7e-26 120.9 105 60.0
Sed0019850 Sechium edule HOM05D005747 ORTHO05D007159 5.7e-26 120.9 109 57.8
Sp6g39390 Schrenkiella parvula HOM05D005747 ORTHO05D007159 1.7e-25 119.4 105 60.0
Zm00001eb028740 Zea mays HOM05D005747 ORTHO05D007159 2.2e-25 119.0 107 58.9
C02p00970 Brassica napus HOM05D001005 ORTHO05D000836 2.8e-25 118.6 105 59.0
PGSC0003DMG400003860 Solanum tuberosum HOM05D005747 ORTHO05D007159 2.8e-25 118.6 133 49.6
Zm00001eb136890 Zea mays HOM05D005747 ORTHO05D007159 3.7e-25 118.2 106 59.4
Glyma.03G182900 Glycine max HOM05D005747 ORTHO05D007159 4.8e-25 117.9 136 50.0
Os12g0566400 Oryza sativa ssp. japonica HOM05D005747 ORTHO05D007159 4.8e-25 117.9 107 58.9
TPR.G25697 Trifolium pratense HOM05D005747 ORTHO05D007159 4.8e-25 117.9 101 62.4
HPP92_009808 Vanilla planifolia HOM05D005747 ORTHO05D007159 4.8e-25 117.9 95 65.3
BcaC03g13014 Brassica carinata HOM05D005747 ORTHO05D007159 8.2e-25 117.1 105 58.1
CDE06G0870 Ceratophyllum demersum HOM05D005747 ORTHO05D007159 9.1e-24 113.6 103 57.3
unitig_578.g16384 Utricularia gibba HOM05D005747 ORTHO05D007159 2.0e-23 112.5 108 54.6
Potri.016G091900 Populus trichocarpa HOM05D005747 ORTHO05D007159 2.7e-23 112.1 107 56.1
Lsat_1_v5_gn_6_25181 Lactuca sativa HOM05D005747 ORTHO05D007159 5.9e-23 110.9 104 56.7
ECA233G4120 Erigeron canadensis HOM05D005747 ORTHO05D007159 1.1e-21 106.7 104 52.9
Nitab4.5_0000578g0140 Nicotiana tabacum HOM05D005747 ORTHO05D007159 1.9e-21 105.9 107 54.2
Nitab4.5_0002632g0020 Nicotiana tabacum HOM05D005747 ORTHO05D007159 3.2e-21 105.1 107 53.3
HanXRQChr13g0401071 Helianthus annuus HOM05D005747 ORTHO05D007159 4.2e-21 104.8 107 51.4
Hund20347 Selenicereus undatus HOM05D005747 ORTHO05D007159 5.5e-21 104.4 79 68.4
Hma1.2p1_0205F.1_g087090 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 5.2e-19 97.8 78 67.9
HanXRQChr02g0051611 Helianthus annuus HOM05D005747 ORTHO05D007159 7.5e-18 94.0 106 47.2
Mapoly0011s0153 Marchantia polymorpha HOM05D005747 ORTHO05D007159 2.2e-17 92.4 105 46.7
SMO137G0056 Selaginella moellendorffii HOM05D005747 ORTHO05D007159 1.1e-16 90.1 98 51.0
SEGI_15519 Sequoiadendron giganteum HOM05D005747 ORTHO05D007159 1.4e-16 89.7 94 52.1
Lj2A1109T71 Lonicera japonica HOM05D005747 ORTHO05D007159 3.1e-16 88.6 93 52.7
Oeu045224.1 Olea europaea HOM05D005747 ORTHO05D007159 3.1e-16 88.6 86 54.7
Oeu053677.1 Olea europaea HOM05D005747 ORTHO05D007159 5.4e-16 87.8 80 61.2
Sed0003931 Sechium edule HOM05D005747 ORTHO05D007159 7.0e-16 87.4 100 47.0
AUR62023620 Chenopodium quinoa HOM05D005747 ORTHO05D007159 2.0e-15 85.9 115 47.0
AUR62004704 Chenopodium quinoa HOM05D005747 ORTHO05D007159 1.0e-14 83.6 104 49.0
Lalb_Chr02g0156001 Lupinus albus HOM05D005747 ORTHO05D007159 1.3e-14 83.2 78 60.3
DCAR_020822 Daucus carota HOM05D005747 ORTHO05D007159 1.7e-14 82.8 78 59.0
AagrBONN_evm.TU.Sc2ySwM_362.1648 Anthoceros agrestis HOM05D005747 ORTHO05D007159 2.2e-14 82.4 82 52.4
CSS0043170 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 2.9e-14 82.0 72 65.3
Pp3c5_16080 Physcomitrium patens HOM05D005747 ORTHO05D007159 8.5e-14 80.5 92 47.8
CSS0041044 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 2.5e-13 79.0 72 63.9
Sabra16G0097500 Salix brachista HOM05D005747 ORTHO05D007159 2.5e-13 79.0 76 55.3
Pp3c6_8930 Physcomitrium patens HOM05D005747 ORTHO05D007159 5.5e-13 77.8 93 45.2
CiPaw.09G219400 Carya illinoinensis HOM05D005747 ORTHO05D007159 2.7e-12 75.5 100 49.0
ATR0104G002 Amborella trichopoda HOM05D005747 ORTHO05D007159 1.8e-11 72.8 81 51.9
COL.COLO4_26972 Corchorus olitorius HOM05D005747 ORTHO05D007159 9.8e-10 67.0 46 71.7
Dinv35784 Davidia involucrata HOM05D005747 ORTHO05D007159 7.0e-08 60.8 50 62.0


User provided reference genes

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