Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.006G055000 Gossypium raimondii HOM05D007633 ORTHO05D008817 3.3e-147 525.0 266 100.0
Gohir.D09G053050 Gossypium hirsutum HOM05D007633 ORTHO05D008817 3.0e-140 501.9 266 97.0
Gohir.A09G053600 Gossypium hirsutum HOM05D007633 ORTHO05D008817 3.1e-137 491.9 266 95.1
Thecc.04G233700 Theobroma cacao HOM05D007633 ORTHO05D008817 4.3e-86 322.0 256 64.5
Atru.chr4.2449 Acer truncatum HOM05D007633 ORTHO05D008817 2.0e-67 260.0 262 56.9
Duzib212G0599 Durio zibethinus HOM05D007633 ORTHO05D008817 7.8e-64 248.1 190 70.0
Cfa015662 Carpinus fangiana HOM05D007633 ORTHO05D008817 3.0e-63 246.1 277 49.5
Ciclev10005651m.g Citrus clementina HOM05D007633 ORTHO05D008817 3.9e-63 245.7 263 51.3
Haze_00885 Corylus avellana HOM05D007633 ORTHO05D008817 1.1e-62 244.2 273 49.5
Potri.008G154200 Populus trichocarpa HOM05D007633 ORTHO05D008817 2.5e-62 243.0 256 50.4
Hma1.2p1_0745F.1_g212150 Hydrangea macrophylla HOM05D007633 ORTHO05D008817 2.8e-61 239.6 258 50.4
Potri.010G086300 Populus trichocarpa HOM05D007633 ORTHO05D008817 1.1e-60 237.7 255 49.8
RcHm_v2.0_Chr4g0415951 Rosa chinensis HOM05D007633 ORTHO05D008817 2.9e-58 229.6 266 46.2
Manes.03G177200 Manihot esculenta HOM05D007633 ORTHO05D008817 3.8e-58 229.2 252 50.4
Sabra10G0057400 Salix brachista HOM05D007633 ORTHO05D008817 3.8e-58 229.2 258 50.0
CSS0018565 Camellia sinensis var. sinensis HOM05D007633 ORTHO05D008817 6.4e-58 228.4 252 48.8
QL06p002095 Quercus lobata HOM05D007633 ORTHO05D008817 5.4e-57 225.3 280 47.9
GSVIVG01017995001 Vitis vinifera HOM05D007633 ORTHO05D008817 5.4e-57 225.3 251 53.0
MELO3C006526.2 Cucumis melo HOM05D007633 ORTHO05D008817 7.1e-57 224.9 252 50.4
FAN22G0362 Fragaria x ananassa HOM05D007633 ORTHO05D008817 7.9e-56 221.5 275 45.1
Dinv14003 Davidia involucrata HOM05D007633 ORTHO05D008817 1.3e-55 220.7 238 52.1
CsaV3_3G013230 Cucumis sativus L. HOM05D007633 ORTHO05D008817 3.9e-55 219.2 263 48.3
FAN02G3335 Fragaria x ananassa HOM05D007633 ORTHO05D008817 3.9e-55 219.2 275 45.1
TAR636G0739 Trochodendron aralioides HOM05D007633 ORTHO05D008817 1.9e-54 216.9 255 45.5
PGR004G0463 Punica granatum HOM05D007633 ORTHO05D008817 8.1e-53 211.5 274 51.5
Rhsim02G0025900 Rhododendron simsii HOM05D007633 ORTHO05D008817 8.1e-53 211.5 260 48.5
CANSAT78G1135 Cannabis sativa HOM05D007633 ORTHO05D008817 5.8e-51 205.3 270 43.0
FvH4_4g16290 Fragaria vesca HOM05D007633 ORTHO05D008817 5.8e-51 205.3 269 43.9
FAN12G0707 Fragaria x ananassa HOM05D007633 ORTHO05D008817 5.8e-51 205.3 269 43.9
Nn1g02349 Nelumbo nucifera HOM05D007633 ORTHO05D008817 7.6e-51 204.9 255 45.1
Actinidia36954 Actinidia chinensis HOM05D007633 ORTHO05D008817 2.9e-50 203.0 258 46.5
Glyma.11G006100 Glycine max HOM05D007633 ORTHO05D008817 3.8e-50 202.6 267 45.7
LjContig00408g0001251 Lotus japonicus HOM05D007633 ORTHO05D008817 2.4e-49 199.9 282 44.3
Oeu011618.1 Olea europaea HOM05D007633 ORTHO05D008817 2.4e-49 199.9 252 46.4
Ca_24403_v3 Cicer arietinum L. HOM05D007633 ORTHO05D008817 1.2e-48 197.6 249 49.8
Eucgr.H03451 Eucalyptus grandis HOM05D007633 ORTHO05D008817 1.3e-47 194.1 277 42.2
Sed0010969 Sechium edule HOM05D007633 ORTHO05D008817 2.3e-47 193.4 237 47.3
Psat4g209480 Pisum sativum HOM05D007633 ORTHO05D008817 8.7e-47 191.4 297 41.8
TPR.G38043 Trifolium pratense HOM05D007633 ORTHO05D008817 3.3e-46 189.5 261 44.4
Glyma.01G237200 Glycine max HOM05D007633 ORTHO05D008817 9.6e-46 188.0 258 45.7
Medtr5g006410 Medicago truncatula HOM05D007633 ORTHO05D008817 4.8e-45 185.7 273 44.0
Phvul.002G044600 Phaseolus vulgaris HOM05D007633 ORTHO05D008817 2.6e-43 179.9 264 40.9
Prupe.1G015500 Prunus persica HOM05D007633 ORTHO05D008817 4.9e-42 175.6 164 53.7
TWI73G0352 Tripterygium wilfordii HOM05D007633 ORTHO05D008817 1.1e-41 174.5 271 42.1
ATR0697G107 Amborella trichopoda HOM05D007633 ORTHO05D008817 4.2e-41 172.6 254 40.2
VMungo1215G1793 Vigna mungo HOM05D007633 ORTHO05D008817 4.2e-41 172.6 270 41.5
Aqoxy2G03409 Aquilegia oxysepala HOM05D007633 ORTHO05D008817 5.5e-41 172.2 238 42.0
Cc03_g03920 Coffea canephora HOM05D007633 ORTHO05D008817 9.3e-41 171.4 256 41.4
Lalb_Chr01g0013131 Lupinus albus HOM05D007633 ORTHO05D008817 1.2e-40 171.0 266 44.7
MD16G1195500 Malus domestica HOM05D007633 ORTHO05D008817 1.6e-40 170.6 251 42.6
vmacro15349 Vaccinium macrocarpon HOM05D007633 ORTHO05D008817 7.9e-40 168.3 263 42.6
HanXRQChr02g0035611 Helianthus annuus HOM05D007633 ORTHO05D008817 5.1e-39 165.6 222 43.2
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 3.3e-38 162.9 269 39.0
CiPaw.01G167500 Carya illinoinensis HOM05D007633 ORTHO05D008817 1.3e-37 161.0 262 38.2
MSTRG.21860 Avicennia marina HOM05D007633 ORTHO05D008817 8.2e-37 158.3 265 39.6
FAN07G1430 Fragaria x ananassa HOM05D007633 ORTHO05D008817 8.2e-37 158.3 199 45.2
Migut.N00191 Erythranthe guttata HOM05D007633 ORTHO05D008817 9.0e-36 154.8 233 39.9
ECA240G3784 Erigeron canadensis HOM05D000137 ORTHO05D000452 1.2e-35 154.5 221 40.7
Solyc09g082160.4 Solanum lycopersicum HOM05D007633 ORTHO05D008817 6.5e-34 148.7 242 38.0
PGSC0003DMG400032254 Solanum tuberosum HOM05D007633 ORTHO05D008817 1.1e-33 147.9 241 37.8
Nitab4.5_0008118g0020 Nicotiana tabacum HOM05D007633 ORTHO05D008817 1.4e-33 147.5 255 36.9
Sopen09g031040 Solanum pennellii HOM05D007633 ORTHO05D008817 2.5e-33 146.7 241 37.8
Hund12119 Selenicereus undatus HOM05D007633 ORTHO05D008817 1.2e-32 144.4 235 37.9
Ah.04g154590 Amaranthus hybridus HOM05D007633 ORTHO05D008817 3.3e-30 136.3 253 38.7
PSO210G6592 Papaver somniferum HOM05D007633 ORTHO05D008817 3.3e-30 136.3 241 34.0
PSO761G0485 Papaver somniferum HOM05D007633 ORTHO05D008817 5.7e-30 135.6 243 34.6
ClCG05G005110 Citrullus lanatus HOM05D007633 ORTHO05D008817 2.8e-29 133.3 258 38.4
Nitab4.5_0001342g0010 Nicotiana tabacum HOM05D007633 ORTHO05D008817 2.8e-29 133.3 239 34.3
Lsat_1_v5_gn_7_64401 Lactuca sativa HOM05D007633 ORTHO05D008817 1.8e-28 130.6 232 33.2
Sopen06g019290 Solanum pennellii HOM05D007633 ORTHO05D008817 9.1e-28 128.3 165 41.8
PSO210G0191 Papaver somniferum HOM05D007633 ORTHO05D008817 4.5e-27 125.9 258 33.3
Peaxi162Scf00092g00615 Petunia axillaris HOM05D007633 ORTHO05D008817 4.5e-27 125.9 257 35.0
Peaxi162Scf00192g01119 Petunia axillaris HOM05D007633 ORTHO05D008817 1.3e-26 124.4 250 34.8
VMungo1215G1192 Vigna mungo HOM05D007633 ORTHO05D008817 5.0e-26 122.5 277 33.2
CDE07G1037 Ceratophyllum demersum HOM05D007633 ORTHO05D008817 3.2e-25 119.8 157 44.6
PSO761G0330 Papaver somniferum HOM05D007633 ORTHO05D008817 5.5e-25 119.0 254 34.3
Solyc06g054140.4 Solanum lycopersicum HOM05D007633 ORTHO05D008817 4.7e-24 115.9 194 35.6
HPP92_006116 Vanilla planifolia HOM05D007633 ORTHO05D008817 6.1e-24 115.5 258 34.1
arahy.Tifrunner.gnm1.ann1.5LNY8Z Arachis hypogaea HOM05D007633 ORTHO05D008817 1.1e-22 111.3 169 39.6
Nitab4.5_0000321g0150 Nicotiana tabacum HOM05D007633 ORTHO05D008817 2.0e-22 110.5 257 32.3
THA.LOC104826165 Tarenaya hassleriana HOM05D012198 ORTHO05D008817 5.7e-22 109.0 258 32.9
AT1G05430 Arabidopsis thaliana HOM05D012198 ORTHO05D008817 9.7e-22 108.2 252 33.3
AUR62034710 Chenopodium quinoa HOM05D007633 ORTHO05D008817 9.7e-22 108.2 156 42.3
arahy.Tifrunner.gnm1.ann1.VQRK5I Arachis hypogaea HOM05D007633 ORTHO05D008817 1.1e-20 104.8 169 39.1
Nitab4.5_0001920g0040 Nicotiana tabacum HOM05D007633 ORTHO05D008817 1.1e-20 104.8 191 34.0
SalBow3G0862 Salvia bowleyana HOM05D007633 ORTHO05D008817 1.1e-20 104.8 251 31.5
Carub.0001s0476 Capsella rubella HOM05D012198 ORTHO05D008817 1.4e-20 104.4 268 32.8
AUR62043551 Chenopodium quinoa HOM05D007633 ORTHO05D008817 1.8e-20 104.0 183 36.1
MD13G1194600 Malus domestica HOM05D007633 ORTHO05D008817 2.4e-20 103.6 161 46.0
Lsat_1_v5_gn_8_155361 Lactuca sativa HOM05D007633 ORTHO05D008817 5.3e-20 102.4 116 45.7
CARHR205340 Cardamine hirsuta HOM05D012198 ORTHO05D008817 4.5e-19 99.4 254 30.7
Aa31LG1G19200 Aethionema arabicum HOM05D005574 ORTHO05D007102 5.9e-19 99.0 249 29.7
Sp1g04300 Schrenkiella parvula HOM05D012198 ORTHO05D008817 1.7e-18 97.4 241 29.5
SEGI_17234 Sequoiadendron giganteum HOM05D007633 ORTHO05D008817 3.8e-18 96.3 178 36.0
EL10Ac3g06495 Beta vulgaris HOM05D007633 ORTHO05D008817 1.9e-17 94.0 256 29.7
AL1G15270 Arabidopsis lyrata HOM05D012198 ORTHO05D008817 2.5e-17 93.6 254 32.3
A10p04130 Brassica napus HOM05D012198 ORTHO05D008817 4.7e-16 89.4 219 32.0
BraA10t42683Z Brassica rapa HOM05D012198 ORTHO05D008817 4.7e-16 89.4 219 32.0
BcaB02g06861 Brassica carinata HOM05D012198 ORTHO05D008817 6.7e-15 85.5 259 30.5
BcaC05g24387 Brassica carinata HOM05D012198 ORTHO05D008817 6.7e-15 85.5 239 29.3
C05p03770 Brassica napus HOM05D012198 ORTHO05D008817 8.8e-15 85.1 242 29.8
BolC5t29154H Brassica oleracea HOM05D012198 ORTHO05D008817 8.8e-15 85.1 242 29.8
Thhalv10008449m.g Eutrema salsugineum HOM05D012198 ORTHO05D008817 8.8e-15 85.1 261 28.4
BcaC05g24389 Brassica carinata HOM05D012198 ORTHO05D008817 2.0e-14 84.0 138 35.5
PGSC0003DMG400016306 Solanum tuberosum HOM05D007633 ORTHO05D008817 2.6e-11 73.6 109 37.6
TWI73G0180 Tripterygium wilfordii HOM05D007633 ORTHO05D008817 3.5e-11 73.2 106 38.7
Sabra08G0117600 Salix brachista HOM05D007633 ORTHO05D008817 2.2e-10 70.5 77 48.1
Os10g0430800 Oryza sativa ssp. japonica HOM05D026697 ORTHO05D008817 3.6e-08 63.2 244 25.4
MD13G1194700 Malus domestica HOM05D007633 ORTHO05D008817 1.8e-07 60.8 71 46.5
Cpa.g.sc58.94 Carica papaya HOM05D007633 ORTHO05D008817 4.0e-07 59.7 94 34.0
DCAR_030642 Daucus carota HOM05D007633 ORTHO05D008817 1.5e-06 57.8 115 37.4
MD07G1251800 Malus domestica HOM05D007633 ORTHO05D008817 3.3e-06 56.6 59 49.2
Cpa.g.sc58.92 Carica papaya HOM05D000003 ORTHO05D000004 4.4e-06 56.2 58 53.4
Lalb_Chr01g0013111 Lupinus albus HOM05D007633 ORTHO05D008817 7.5e-06 55.5 63 52.4


User provided reference genes

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