Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.006G043100 Gossypium raimondii HOM05D004259 ORTHO05D005014 1.8e-66 255.8 124 100.0
Gohir.D12G080700 Gossypium hirsutum HOM05D004259 ORTHO05D005014 5.9e-38 161.0 114 75.4
Gorai.011G277900 Gossypium raimondii HOM05D004259 ORTHO05D005014 7.9e-35 150.6 115 70.4
Gohir.D11G345100 Gossypium hirsutum HOM05D004259 ORTHO05D005014 5.3e-31 137.9 101 73.3
Gorai.007G375500 Gossypium raimondii HOM05D004259 ORTHO05D005014 1.6e-30 136.3 101 72.3
Gohir.A11G326200 Gossypium hirsutum HOM05D004259 ORTHO05D005014 2.6e-30 135.6 101 72.3
Duzib128G0657 Durio zibethinus HOM05D004259 ORTHO05D005014 5.5e-28 127.9 101 67.3
COL.COLO4_14836 Corchorus olitorius HOM05D004259 ORTHO05D005014 1.4e-26 123.2 101 63.4
Thecc.05G042500 Theobroma cacao HOM05D004259 ORTHO05D005014 6.7e-26 120.9 101 62.4
Gohir.D03G074850 Gossypium hirsutum HOM05D004259 ORTHO05D005014 4.4e-25 118.2 93 71.0
Gohir.D01G124400 Gossypium hirsutum HOM05D004259 ORTHO05D005014 1.7e-24 116.3 92 70.7
Gohir.D02G123750 Gossypium hirsutum HOM05D004259 ORTHO05D005014 1.7e-24 116.3 92 70.7
Gohir.D04G089650 Gossypium hirsutum HOM05D004259 ORTHO05D005014 4.8e-24 114.8 94 68.1
Gorai.005G130400 Gossypium raimondii HOM05D004259 ORTHO05D005014 4.8e-24 114.8 92 69.6
Gorai.008G056700 Gossypium raimondii HOM05D004259 ORTHO05D005014 4.8e-24 114.8 93 69.9
Gohir.D09G120150 Gossypium hirsutum HOM05D004259 ORTHO05D005014 6.3e-24 114.4 92 69.6
Gorai.004G133100 Gossypium raimondii HOM05D004259 ORTHO05D005014 6.3e-24 114.4 92 69.6
Gorai.012G099900 Gossypium raimondii HOM05D004259 ORTHO05D005014 1.1e-23 113.6 93 65.6
Nn1g05830 Nelumbo nucifera HOM05D004259 ORTHO05D005014 3.1e-23 112.1 101 56.4
Potri.003G094800 Populus trichocarpa HOM05D004259 ORTHO05D005014 7.0e-23 110.9 101 58.4
CiPaw.15G061500 Carya illinoinensis HOM05D004259 ORTHO05D005014 9.1e-23 110.5 100 58.0
GSVIVG01009522001 Vitis vinifera HOM05D004259 ORTHO05D005014 9.1e-23 110.5 101 56.4
CSS0003524 Camellia sinensis var. sinensis HOM05D004259 ORTHO05D005014 1.2e-22 110.2 101 57.4
BcaC02g11869 Brassica carinata HOM05D004259 ORTHO05D005014 1.6e-22 109.8 100 57.0
BolC4t22638H Brassica oleracea HOM05D004259 ORTHO05D005014 1.6e-22 109.8 100 57.0
BraA05t19805Z Brassica rapa HOM05D004259 ORTHO05D005014 2.7e-22 109.0 100 57.0
THA.LOC104806568 Tarenaya hassleriana HOM05D004259 ORTHO05D005014 2.7e-22 109.0 98 57.1
C04p10400 Brassica napus HOM05D004259 ORTHO05D005014 3.5e-22 108.6 95 58.9
Lj3C736T6 Lonicera japonica HOM05D004259 ORTHO05D005014 3.5e-22 108.6 101 57.4
MBI02_g17334_MAGBIO Magnolia biondii HOM05D004259 ORTHO05D005014 3.5e-22 108.6 101 57.4
THA.LOC104809222 Tarenaya hassleriana HOM05D004259 ORTHO05D005014 3.5e-22 108.6 100 56.0
A05p08400 Brassica napus HOM05D004259 ORTHO05D005014 5.9e-22 107.8 100 56.0
CSS0037728 Camellia sinensis var. sinensis HOM05D004259 ORTHO05D005014 5.9e-22 107.8 101 56.4
Sabra03G0064000 Salix brachista HOM05D004259 ORTHO05D005014 5.9e-22 107.8 101 55.4
TAR376G0692 Trochodendron aralioides HOM05D004259 ORTHO05D005014 5.9e-22 107.8 95 56.8
Sabra11G0061200 Salix brachista HOM05D004259 ORTHO05D005014 7.7e-22 107.5 101 56.4
BcaB02g09273 Brassica carinata HOM05D004259 ORTHO05D005014 1.0e-21 107.1 104 52.9
Ciclev10012027m.g Citrus clementina HOM05D004259 ORTHO05D005014 1.3e-21 106.7 101 55.4
Cpa.g.sc973.4 Carica papaya HOM05D004259 ORTHO05D005014 1.7e-21 106.3 101 54.5
Atru.chr8.1940 Acer truncatum HOM05D004259 ORTHO05D005014 2.2e-21 105.9 101 55.4
Cfa018528 Carpinus fangiana HOM05D004259 ORTHO05D005014 2.2e-21 105.9 95 57.9
Haze_17543 Corylus avellana HOM05D004259 ORTHO05D005014 2.2e-21 105.9 95 57.9
Thhalv10016846m.g Eutrema salsugineum HOM05D004259 ORTHO05D005014 2.2e-21 105.9 100 55.0
SalBow3G4106 Salvia bowleyana HOM05D004259 ORTHO05D005014 2.9e-21 105.5 101 59.4
ATR0100G023 Amborella trichopoda HOM05D004259 ORTHO05D005014 5.0e-21 104.8 101 54.5
Manes.08G078200 Manihot esculenta HOM05D004259 ORTHO05D005014 5.0e-21 104.8 101 52.5
Nitab4.5_0002045g0130 Nicotiana tabacum HOM05D004259 ORTHO05D005014 5.0e-21 104.8 101 54.5
FAN27G2417 Fragaria x ananassa HOM05D004259 ORTHO05D005014 6.5e-21 104.4 101 55.4
SalBow2G1152 Salvia bowleyana HOM05D004259 ORTHO05D005014 6.5e-21 104.4 101 58.4
SalBow2G2463 Salvia bowleyana HOM05D004259 ORTHO05D005014 6.5e-21 104.4 101 58.4
SalBow2G2610 Salvia bowleyana HOM05D004259 ORTHO05D005014 6.5e-21 104.4 101 58.4
FvH4_2g34610 Fragaria vesca HOM05D004259 ORTHO05D005014 8.5e-21 104.0 101 55.4
PSO339G6255 Papaver somniferum HOM05D004259 ORTHO05D005014 8.5e-21 104.0 103 58.3
Sc07g0003460 Simmondsia chinensis HOM05D004259 ORTHO05D005014 1.5e-20 103.2 101 54.5
RcHm_v2.0_Chr6g0307691 Rosa chinensis HOM05D004259 ORTHO05D005014 1.9e-20 102.8 101 52.5
Haze_17552 Corylus avellana HOM05D004259 ORTHO05D005014 2.5e-20 102.4 102 54.9
MD08G1103300 Malus domestica HOM05D004259 ORTHO05D005014 2.5e-20 102.4 101 51.5
Peaxi162Scf00162g00029 Petunia axillaris HOM05D004259 ORTHO05D005014 2.5e-20 102.4 101 52.5
TWI53G0519 Tripterygium wilfordii HOM05D004259 ORTHO05D005014 2.5e-20 102.4 95 54.7
vmacro04457 Vaccinium macrocarpon HOM05D004259 ORTHO05D005014 2.5e-20 102.4 102 54.9
MSTRG.24327 Avicennia marina HOM05D004259 ORTHO05D005014 3.2e-20 102.1 105 53.3
Oeu018211.1 Olea europaea HOM05D004259 ORTHO05D005014 3.2e-20 102.1 105 54.3
Gohir.D09G037800 Gossypium hirsutum HOM05D004259 ORTHO05D005014 4.2e-20 101.7 54 94.4
PSO541G1765 Papaver somniferum HOM05D004259 ORTHO05D005014 4.2e-20 101.7 103 57.3
PSO675G0522 Papaver somniferum HOM05D004259 ORTHO05D005014 4.2e-20 101.7 103 57.3
Migut.N02703 Erythranthe guttata HOM05D004259 ORTHO05D005014 5.5e-20 101.3 105 52.4
Gohir.D10G134400 Gossypium hirsutum HOM05D004259 ORTHO05D005014 5.5e-20 101.3 84 66.7
Ah.05g168820 Amaranthus hybridus HOM05D001625 ORTHO05D005014 7.2e-20 100.9 102 51.0
Carub.0004s1948 Capsella rubella HOM05D004259 ORTHO05D005014 7.2e-20 100.9 100 52.0
FAN15G2861 Fragaria x ananassa HOM05D001625 ORTHO05D005014 7.2e-20 100.9 101 54.5
Peaxi162Scf00929g00211 Petunia axillaris HOM05D004259 ORTHO05D005014 7.2e-20 100.9 101 52.5
FAN20G1942 Fragaria x ananassa HOM05D004259 ORTHO05D005014 9.4e-20 100.5 101 53.5
HPP92_027220 Vanilla planifolia HOM05D004259 ORTHO05D005014 9.4e-20 100.5 102 52.9
ClCG08G015740 Citrullus lanatus HOM05D004259 ORTHO05D005014 1.6e-19 99.8 101 53.5
Nitab4.5_0002664g0020 Nicotiana tabacum HOM05D004259 ORTHO05D005014 1.6e-19 99.8 101 51.5
SalBow2G0695 Salvia bowleyana HOM05D004259 ORTHO05D005014 1.6e-19 99.8 101 56.4
SalBow2G2012 Salvia bowleyana HOM05D004259 ORTHO05D005014 1.6e-19 99.8 101 56.4
AT2G37560 Arabidopsis thaliana HOM05D004259 ORTHO05D005014 2.1e-19 99.4 100 51.0
Lsat_1_v5_gn_1_20280 Lactuca sativa HOM05D004259 ORTHO05D005014 2.7e-19 99.0 95 57.9
unitig_26.g10027 Utricularia gibba HOM05D004259 ORTHO05D005014 2.7e-19 99.0 101 54.5
SGA_v2.0_scaffold204G41641 Striga asiatica HOM05D004259 ORTHO05D005014 3.6e-19 98.6 101 54.5
CsaV3_2G028020 Cucumis sativus L. HOM05D004259 ORTHO05D005014 4.7e-19 98.2 101 51.5
AL4G34050 Arabidopsis lyrata HOM05D004259 ORTHO05D005014 6.1e-19 97.8 100 50.0
AL4G34080 Arabidopsis lyrata HOM05D004259 ORTHO05D005014 6.1e-19 97.8 100 50.0
CARHR132030 Cardamine hirsuta HOM05D004259 ORTHO05D005014 8.0e-19 97.4 95 52.6
CDE10G1325 Ceratophyllum demersum HOM05D004259 ORTHO05D005014 8.0e-19 97.4 101 53.5
Sp4g19910 Schrenkiella parvula HOM05D004259 ORTHO05D005014 8.0e-19 97.4 100 51.0
Prupe.1G438300 Prunus persica HOM05D004259 ORTHO05D005014 1.0e-18 97.1 101 49.5
CAN.G65.190 Capsicum annuum HOM05D004259 ORTHO05D005014 1.4e-18 96.7 101 49.5
Hma1.2p1_0718F.1_g208420 Hydrangea macrophylla HOM05D004259 ORTHO05D005014 1.4e-18 96.7 97 52.6
Phvul.001G021100 Phaseolus vulgaris HOM05D004259 ORTHO05D005014 1.8e-18 96.3 100 53.0
Sed0023883 Sechium edule HOM05D004259 ORTHO05D005014 1.8e-18 96.3 104 51.0
PGSC0003DMG400027003 Solanum tuberosum HOM05D004259 ORTHO05D005014 1.8e-18 96.3 102 52.0
Cc10_g04310 Coffea canephora HOM05D004259 ORTHO05D005014 4.0e-18 95.1 101 51.5
MELO3C010882.2 Cucumis melo HOM05D004259 ORTHO05D005014 4.0e-18 95.1 101 49.5
AUR62022427 Chenopodium quinoa HOM05D004259 ORTHO05D005014 5.2e-18 94.7 101 47.5
Lj5g0003666 Lotus japonicus HOM05D004259 ORTHO05D005014 5.2e-18 94.7 95 52.6
Solyc06g073510.3 Solanum lycopersicum HOM05D004259 ORTHO05D005014 5.2e-18 94.7 102 51.0
Sopen06g029870 Solanum pennellii HOM05D004259 ORTHO05D005014 5.2e-18 94.7 102 51.0
AUR62039303 Chenopodium quinoa HOM05D004259 ORTHO05D005014 6.8e-18 94.4 101 47.5
Lalb_Chr19g0129351 Lupinus albus HOM05D004259 ORTHO05D005014 1.5e-17 93.2 101 52.5
EL10Ac3g06655 Beta vulgaris HOM05D004259 ORTHO05D005014 2.0e-17 92.8 101 46.5
Aqoxy7G01016 Aquilegia oxysepala HOM05D004259 ORTHO05D005014 2.6e-17 92.4 102 52.0
HanXRQChr04g0103531 Helianthus annuus HOM05D004259 ORTHO05D005014 2.6e-17 92.4 101 50.5
QL02p005360 Quercus lobata HOM05D004259 ORTHO05D005014 2.6e-17 92.4 89 56.2
Rhsim10G0028600 Rhododendron simsii HOM05D004259 ORTHO05D005014 5.7e-17 91.3 102 50.0
VMungo0647G0522 Vigna mungo HOM05D004259 ORTHO05D005014 5.7e-17 91.3 105 51.4
CANSAT01G2810 Cannabis sativa HOM05D004259 ORTHO05D005014 7.5e-17 90.9 101 47.5
PGR031G2227 Punica granatum HOM05D004259 ORTHO05D005014 9.8e-17 90.5 103 51.5
Eucgr.F00239 Eucalyptus grandis HOM05D004259 ORTHO05D005014 3.7e-16 88.6 94 50.0
Rhsim10G0028100 Rhododendron simsii HOM05D004259 ORTHO05D005014 4.8e-16 88.2 101 50.5
TWI53G0792 Tripterygium wilfordii HOM05D004259 ORTHO05D005014 6.3e-16 87.8 97 47.4
SHI12655 Sapria himalayana HOM05D004259 ORTHO05D005014 1.1e-15 87.0 102 46.1
Glyma.14G082100 Glycine max HOM05D004259 ORTHO05D005014 1.8e-15 86.3 99 49.5
arahy.Tifrunner.gnm1.ann1.1PWX74 Arachis hypogaea HOM05D004259 ORTHO05D005014 3.1e-15 85.5 96 53.1
arahy.Tifrunner.gnm1.ann1.63NC9C Arachis hypogaea HOM05D004259 ORTHO05D005014 3.1e-15 85.5 96 53.1
Nitab4.5_0000111g0020 Nicotiana tabacum HOM05D004259 ORTHO05D005014 5.4e-15 84.7 101 47.5
Aa31sc112G60 Aethionema arabicum HOM05D004259 ORTHO05D005014 9.1e-15 84.0 92 48.9
Ca_01811_v3 Cicer arietinum L. HOM05D004259 ORTHO05D005014 5.9e-14 81.3 92 48.9
Ca_29610_v3 Cicer arietinum L. HOM05D004259 ORTHO05D005014 5.9e-14 81.3 92 48.9
Psat6g012600 Pisum sativum HOM05D004259 ORTHO05D005014 7.7e-14 80.9 89 49.4
Gohir.D09G088725 Gossypium hirsutum HOM05D004259 ORTHO05D005014 1.0e-13 80.5 43 93.0
TPR.G17553 Trifolium pratense HOM05D004259 ORTHO05D005014 1.0e-13 80.5 92 47.8
Medtr1g019770 Medicago truncatula HOM05D004259 ORTHO05D005014 2.2e-13 79.3 89 49.4
Os03g0184700 Oryza sativa ssp. japonica HOM05D004259 ORTHO05D005014 2.9e-13 79.0 96 50.0
Gorai.011G153000 Gossypium raimondii HOM05D004259 ORTHO05D005014 1.1e-12 77.0 43 88.4
Peaxi162Scf00003g02311 Petunia axillaris HOM05D004259 ORTHO05D005014 2.5e-12 75.9 102 47.1
Zm00001eb248940 Zea mays HOM05D004259 ORTHO05D005014 4.2e-12 75.1 99 47.5
Cc00_g16720 Coffea canephora HOM05D004259 ORTHO05D005014 9.4e-12 73.9 104 44.2
SEGI_22221 Sequoiadendron giganteum HOM05D004259 ORTHO05D005014 8.0e-11 70.9 87 47.1
Gohir.D02G104501 Gossypium hirsutum HOM05D004259 ORTHO05D005014 1.8e-10 69.7 61 55.7
Gorai.005G118700 Gossypium raimondii HOM05D004259 ORTHO05D005014 1.8e-10 69.7 61 55.7
Sabra15G0136400 Salix brachista HOM05D004259 ORTHO05D004947 1.5e-09 66.6 48 70.8
RcHm_v2.0_Chr6g0307531 Rosa chinensis HOM05D004259 ORTHO05D005014 2.0e-09 66.2 81 46.9
Cc01_g09720 Coffea canephora HOM05D004259 ORTHO05D005014 5.7e-09 64.7 44 72.7
MD15G1084600 Malus domestica HOM05D004259 ORTHO05D005014 3.7e-08 62.0 41 73.2
Cc00_g00370 Coffea canephora HOM05D004259 ORTHO05D005014 4.9e-08 61.6 43 67.4
Cc06_g20720 Coffea canephora HOM05D004259 ORTHO05D005014 8.3e-08 60.8 86 46.5
Cc11_g02680 Coffea canephora HOM05D004259 ORTHO05D005014 8.3e-08 60.8 43 65.1
Cc02_g31720 Coffea canephora HOM05D004259 ORTHO05D005014 1.1e-07 60.5 42 69.0
Dinv39327 Davidia involucrata HOM05D004259 ORTHO05D005014 3.1e-07 58.9 32 71.9
SMO147G0302 Selaginella moellendorffii HOM05D004259 ORTHO05D005014 3.1e-07 58.9 82 41.5
Cc09_g06650 Coffea canephora HOM05D004259 ORTHO05D005014 9.2e-07 57.4 42 61.9
Cc10_g11800 Coffea canephora HOM05D006912 ORTHO05D008686 1.2e-06 57.0 57 56.1
Actinidia29866 Actinidia chinensis HOM05D004259 ORTHO05D005014 1.6e-06 56.6 43 62.8
Gohir.D01G066700 Gossypium hirsutum HOM05D000706 ORTHO05D013538 1.6e-06 56.6 28 82.1
Gorai.007G356500 Gossypium raimondii HOM05D000706 ORTHO05D013538 3.5e-06 55.5 28 82.1
Nitab4.5_0004918g0050 Nicotiana tabacum HOM05D004259 ORTHO05D005014 3.5e-06 55.5 32 68.8
Gohir.D06G127100 Gossypium hirsutum HOM05D000706 ORTHO05D013538 5.9e-06 54.7 24 91.7
Gohir.D13G142000 Gossypium hirsutum HOM05D000706 ORTHO05D013538 7.7e-06 54.3 28 78.6


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