Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.006G033900 Gossypium raimondii HOM05D004963 ORTHO05D006638 9.8e-250 866.3 430 100.0
Gohir.D09G029066 Gossypium hirsutum HOM05D004963 ORTHO05D006638 3.3e-245 851.3 430 98.8
Gohir.A09G029300 Gossypium hirsutum HOM05D004963 ORTHO05D006638 3.6e-244 847.8 430 97.9
Duzib147G0997 Durio zibethinus HOM05D004963 ORTHO05D006638 2.2e-209 732.3 433 84.8
COL.COLO4_29124 Corchorus olitorius HOM05D004963 ORTHO05D006638 2.1e-191 672.5 431 77.7
Thecc.04G017500 Theobroma cacao HOM05D004963 ORTHO05D006638 4.2e-176 621.7 430 74.0
Prupe.3G292000 Prunus persica HOM05D004963 ORTHO05D006638 7.2e-152 541.2 431 62.9
RcHm_v2.0_Chr2g0173101 Rosa chinensis HOM05D004963 ORTHO05D006638 5.2e-150 535.0 435 63.2
TAR629G0020 Trochodendron aralioides HOM05D004963 ORTHO05D006638 7.5e-149 531.2 432 62.7
Dinv35107 Davidia involucrata HOM05D004963 ORTHO05D006638 3.1e-147 525.8 435 60.5
Cfa007367 Carpinus fangiana HOM05D004963 ORTHO05D006638 9.2e-147 524.2 432 61.3
FvH4_6g51430 Fragaria vesca HOM05D004963 ORTHO05D006638 9.2e-147 524.2 435 60.9
Manes.17G112100 Manihot esculenta HOM05D004963 ORTHO05D006638 2.3e-145 519.6 433 60.7
GSVIVG01032403001 Vitis vinifera HOM05D004963 ORTHO05D006638 3.9e-145 518.8 433 61.4
Lalb_Chr06g0175731 Lupinus albus HOM05D004963 ORTHO05D006638 4.0e-142 508.8 433 58.2
Potri.001G345100 Populus trichocarpa HOM05D004963 ORTHO05D006638 1.5e-141 506.9 430 57.4
TWI56G0249 Tripterygium wilfordii HOM05D004963 ORTHO05D006638 7.5e-141 504.6 431 58.9
Glyma.05G003500 Glycine max HOM05D004963 ORTHO05D006638 1.3e-140 503.8 432 57.6
CiPaw.03G043900 Carya illinoinensis HOM05D004963 ORTHO05D006638 1.4e-139 500.4 436 59.9
TPR.G33247 Trifolium pratense HOM05D004963 ORTHO05D006638 4.1e-139 498.8 435 58.6
Sed0022939 Sechium edule HOM05D004963 ORTHO05D006638 9.2e-139 497.7 435 57.2
Sabra16G0224100 Salix brachista HOM05D004963 ORTHO05D006638 2.0e-138 496.5 431 57.1
CSS0016229 Camellia sinensis var. sinensis HOM05D004963 ORTHO05D006638 2.7e-138 496.1 435 58.4
MD17G1026700 Malus domestica HOM05D004963 ORTHO05D006638 3.5e-138 495.7 442 58.8
CsaV3_3G042810 Cucumis sativus L. HOM05D004963 ORTHO05D006638 2.3e-137 493.0 437 58.1
Lj2g0007459 Lotus japonicus HOM05D004963 ORTHO05D006638 2.3e-137 493.0 434 56.9
MELO3C026582.2 Cucumis melo HOM05D004963 ORTHO05D006638 3.9e-137 492.3 437 58.1
Medtr6g004840 Medicago truncatula HOM05D004963 ORTHO05D006638 3.9e-137 492.3 433 57.7
Rhsim10G0015700 Rhododendron simsii HOM05D004963 ORTHO05D006638 1.5e-136 490.3 458 55.7
VMungo0464G1605 Vigna mungo HOM05D004963 ORTHO05D006638 2.5e-136 489.6 431 55.5
Ciclev10014326m.g Citrus clementina HOM05D004963 ORTHO05D006638 4.3e-136 488.8 433 58.2
Phvul.004G006800 Phaseolus vulgaris HOM05D004963 ORTHO05D006638 9.5e-136 487.6 431 55.2
PGR083G0595 Punica granatum HOM05D004963 ORTHO05D006638 1.6e-135 486.9 436 56.0
Psat1g054400 Pisum sativum HOM05D004963 ORTHO05D006638 2.1e-135 486.5 439 56.9
FAN14G4225 Fragaria x ananassa HOM05D004963 ORTHO05D006638 1.5e-133 480.3 427 58.3
Lju41A42T102 Lonicera japonica HOM05D004963 ORTHO05D006638 5.8e-133 478.4 433 55.7
Hma1.2p1_0999F.1_g246170 Hydrangea macrophylla HOM05D004963 ORTHO05D006638 2.4e-131 473.0 432 56.0
Ca_04160_v3 Cicer arietinum L. HOM05D004963 ORTHO05D006638 9.2e-131 471.1 434 54.1
CANSAT64G0570 Cannabis sativa HOM05D004963 ORTHO05D006638 1.2e-130 470.7 426 58.2
Haze_14742 Corylus avellana HOM05D004963 ORTHO05D006638 1.2e-130 470.7 429 57.6
PSO063G6295 Papaver somniferum HOM05D004963 ORTHO05D006638 4.6e-130 468.8 432 54.9
PSO067G0032 Papaver somniferum HOM05D004963 ORTHO05D006638 1.9e-128 463.4 431 53.6
vmacro05867 Vaccinium macrocarpon HOM05D004963 ORTHO05D006638 5.6e-128 461.8 454 53.7
THA.LOC104805370 Tarenaya hassleriana HOM05D004963 ORTHO05D006638 2.1e-127 459.9 437 52.9
Solyc02g070810.4 Solanum lycopersicum HOM05D004963 ORTHO05D006638 2.3e-126 456.4 432 53.0
ClCG10G013870 Citrullus lanatus HOM05D004963 ORTHO05D006638 3.1e-126 456.1 435 55.4
Ah.03g137060 Amaranthus hybridus HOM05D004963 ORTHO05D006638 5.2e-126 455.3 427 53.2
Sopen02g019920 Solanum pennellii HOM05D004963 ORTHO05D006638 7.5e-125 451.4 432 52.8
PGSC0003DMG400008314 Solanum tuberosum HOM05D004963 ORTHO05D006638 2.9e-124 449.5 432 52.3
CAN.G257.2 Capsicum annuum HOM05D004963 ORTHO05D006638 2.4e-123 446.4 430 52.3
arahy.Tifrunner.gnm1.ann1.WBLX3G Arachis hypogaea HOM05D004963 ORTHO05D006638 1.0e-121 441.0 412 54.4
Thhalv10027618m.g Eutrema salsugineum HOM05D004963 ORTHO05D006638 1.0e-121 441.0 436 49.5
Aqoxy5G03770 Aquilegia oxysepala HOM05D004963 ORTHO05D006638 5.1e-121 438.7 434 52.8
arahy.Tifrunner.gnm1.ann1.8578L4 Arachis hypogaea HOM05D004963 ORTHO05D006638 5.6e-120 435.3 423 53.4
EL10Ac6g14083 Beta vulgaris HOM05D004963 ORTHO05D006638 7.3e-120 434.9 432 51.4
Nitab4.5_0001655g0190 Nicotiana tabacum HOM05D004963 ORTHO05D006638 1.2e-119 434.1 430 50.7
Nitab4.5_0001040g0180 Nicotiana tabacum HOM05D004963 ORTHO05D006638 2.8e-119 433.0 432 50.7
Carub.0007s3510 Capsella rubella HOM05D004963 ORTHO05D006638 6.2e-119 431.8 428 50.0
MSTRG.3144 Avicennia marina HOM05D004963 ORTHO05D006638 1.4e-118 430.6 432 50.2
BcaB02g07947 Brassica carinata HOM05D004963 ORTHO05D006638 2.6e-117 426.4 435 48.7
CARHR261510 Cardamine hirsuta HOM05D004963 ORTHO05D006638 4.4e-117 425.6 432 49.5
BcaC08g44458 Brassica carinata HOM05D004963 ORTHO05D006638 8.4e-116 421.4 433 48.3
SalBow1G1005 Salvia bowleyana HOM05D004963 ORTHO05D006638 1.9e-115 420.2 431 51.3
Rhsim10G0016800 Rhododendron simsii HOM05D004963 ORTHO05D006638 3.2e-115 419.5 634 40.2
AL7G49340 Arabidopsis lyrata HOM05D004963 ORTHO05D006638 4.2e-115 419.1 431 49.2
Aa31LG9G1130 Aethionema arabicum HOM05D004963 ORTHO05D006638 1.2e-114 417.5 471 45.6
BolC6t37108H Brassica oleracea HOM05D004963 ORTHO05D006638 1.6e-114 417.2 446 47.3
AT5G40480 Arabidopsis thaliana HOM05D004963 ORTHO05D006638 2.7e-114 416.4 431 48.5
DCAR_001439 Daucus carota HOM05D004963 ORTHO05D006638 1.0e-113 414.5 432 48.4
Sp7g01430 Schrenkiella parvula HOM05D004963 ORTHO05D006638 1.9e-112 410.2 439 47.2
BraA07t29729Z Brassica rapa HOM05D004963 ORTHO05D006638 2.5e-112 409.8 435 47.4
C06p19070 Brassica napus HOM05D004963 ORTHO05D006638 1.6e-111 407.1 460 45.4
Peaxi162Scf00796g00213 Petunia axillaris HOM05D004963 ORTHO05D006638 1.6e-111 407.1 431 48.0
A07p20280 Brassica napus HOM05D004963 ORTHO05D006638 8.4e-108 394.8 460 44.3
Atru.chr6.2400 Acer truncatum HOM05D004963 ORTHO05D006638 1.4e-107 394.0 335 59.7
Cc07_g01650 Coffea canephora HOM05D004963 ORTHO05D006638 3.2e-107 392.9 432 48.6
AUR62043498 Chenopodium quinoa HOM05D004963 ORTHO05D006638 7.1e-107 391.7 427 47.8
Nn4g22627 Nelumbo nucifera HOM05D004963 ORTHO05D006638 1.6e-106 390.6 323 57.9
SGA_v2.0_scaffold18G08276 Striga asiatica HOM05D004963 ORTHO05D006638 2.1e-103 380.2 446 45.7
ATR0824G203 Amborella trichopoda HOM05D004963 ORTHO05D006638 1.6e-95 354.0 447 43.2
AUR62028465 Chenopodium quinoa HOM05D004963 ORTHO05D006638 1.4e-94 350.9 427 44.5
Sc03g0007420 Simmondsia chinensis HOM05D004963 ORTHO05D006638 7.6e-93 345.1 314 53.5
unitig_748.g6983 Utricularia gibba HOM05D004963 ORTHO05D006638 2.2e-92 343.6 439 45.1
Zm00001eb096130 Zea mays HOM05D004963 ORTHO05D006638 1.0e-89 334.7 437 41.9
Os09g0565500 Oryza sativa ssp. japonica HOM05D004963 ORTHO05D006638 1.3e-89 334.3 431 42.2
Migut.H00075 Erythranthe guttata HOM05D004963 ORTHO05D006638 6.2e-87 325.5 432 40.3
FAN11G1562 Fragaria x ananassa HOM05D004963 ORTHO05D006638 5.5e-75 285.8 230 62.6
HPP92_013426 Vanilla planifolia HOM05D004963 ORTHO05D006638 3.1e-70 270.0 348 44.3
FvH4_3g31750 Fragaria vesca HOM05D004963 ORTHO05D006638 3.4e-69 266.5 194 66.0
FvH4_4g00580 Fragaria vesca HOM05D004963 ORTHO05D006638 7.7e-69 265.4 194 65.5
FAN09G2859 Fragaria x ananassa HOM05D004963 ORTHO05D006638 5.0e-68 262.7 236 57.2
SMO145G0002 Selaginella moellendorffii HOM05D004963 ORTHO05D006638 1.1e-67 261.5 465 35.3
Carub.0007s0778 Capsella rubella HOM05D004963 ORTHO05D006638 5.7e-64 249.2 285 43.2
Mapoly0043s0050 Marchantia polymorpha HOM05D004963 ORTHO05D006638 5.0e-60 236.1 467 32.1
Pp3c27_1470 Physcomitrium patens HOM05D004963 ORTHO05D006638 1.9e-51 207.6 470 30.6
CDE07G1094 Ceratophyllum demersum HOM05D004963 ORTHO05D006638 1.5e-48 198.0 244 43.9
CBR_g4854 Chara braunii HOM05D004963 ORTHO05D006638 1.3e-47 194.9 472 29.7
SEGI_28921 Sequoiadendron giganteum HOM05D004963 ORTHO05D006638 2.4e-46 190.7 300 35.3
CBR_g4853 Chara braunii HOM05D004963 ORTHO05D006638 7.0e-46 189.1 473 29.0
DCAR_003836 Daucus carota HOM05D004963 ORTHO05D006638 5.2e-41 172.9 239 38.1
Psat2g063360 Pisum sativum HOM05D004963 ORTHO05D006638 3.4e-40 170.2 164 51.8
Cpa.g.sc108.69 Carica papaya HOM05D004963 ORTHO05D006638 1.3e-39 168.3 136 61.8
FvH4_1g22462 Fragaria vesca HOM05D004963 ORTHO05D006638 2.3e-33 147.5 118 61.9
FAN02G1996 Fragaria x ananassa HOM05D004963 ORTHO05D006638 3.2e-30 137.1 145 49.7
PGR083G1349 Punica granatum HOM05D004963 ORTHO05D006638 2.1e-26 124.4 149 43.6
Glyma.15G246500 Glycine max HOM05D004963 ORTHO05D006638 1.7e-23 114.8 100 57.0
CDE07G0302 Ceratophyllum demersum HOM05D004963 ORTHO05D006638 1.4e-22 111.7 160 40.0
Atru.chr6.2399 Acer truncatum HOM05D004963 ORTHO05D006638 1.5e-19 101.7 71 67.6
C06p05790 Brassica napus HOM05D004963 ORTHO05D021908 3.4e-16 90.5 183 31.7
C06p05800 Brassica napus HOM05D004963 ORTHO05D021908 4.4e-16 90.1 250 28.0
Carub.0006s0908 Capsella rubella HOM05D004963 ORTHO05D021908 6.6e-12 76.3 125 36.0
Psat4g170200 Pisum sativum HOM05D003662 ORTHO05D001824 2.0e-08 64.7 55 50.9
Psat7g026160 Pisum sativum HOM05D004963 ORTHO05D001824 5.8e-08 63.2 59 47.5


User provided reference genes

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