Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.006G008300 Gossypium raimondii HOM05D004473 ORTHO05D005652 1.9e-30 135.2 68 100.0
Thhalv10001851m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 1.1e-14 82.8 83 50.6
Gorai.002G165800 Gossypium raimondii HOM05D001387 ORTHO05D001250 1.9e-14 82.0 95 52.6
Gohir.1Z050066 Gossypium hirsutum HOM05D004473 ORTHO05D005652 4.2e-14 80.9 95 55.8
Gohir.A04G039120 Gossypium hirsutum HOM05D004473 ORTHO05D005652 4.2e-14 80.9 95 55.8
Gohir.A04G039150 Gossypium hirsutum HOM05D004473 ORTHO05D005652 4.2e-14 80.9 95 55.8
Gohir.A08G095662 Gossypium hirsutum HOM05D004473 ORTHO05D005652 9.4e-14 79.7 95 54.7
Sed0017792 Sechium edule HOM05D004473 ORTHO05D005652 1.2e-13 79.3 95 44.2
Sed0024057 Sechium edule HOM05D004473 ORTHO05D005652 1.2e-13 79.3 95 44.2
TWI34G1450 Tripterygium wilfordii HOM05D004473 ORTHO05D005652 8.8e-12 73.2 94 44.7
Atru.chr6.757 Acer truncatum HOM05D004473 ORTHO05D005652 2.6e-11 71.6 95 41.1
BcaC05g28805 Brassica carinata HOM05D004473 ORTHO05D005652 3.4e-11 71.2 95 43.2
C06p21390 Brassica napus HOM05D004473 ORTHO05D005652 3.4e-11 71.2 95 43.2
BraSC143t45676Z Brassica rapa HOM05D004473 ORTHO05D005652 3.4e-11 71.2 95 43.2
BraSC151t45687Z Brassica rapa HOM05D004473 ORTHO05D005652 3.4e-11 71.2 95 43.2
BraSC25t45889Z Brassica rapa HOM05D004473 ORTHO05D005652 3.4e-11 71.2 95 43.2
ATCG00040 Arabidopsis thaliana HOM05D004473 ORTHO05D005652 4.4e-11 70.9 95 42.1
Eucgr.D01147 Eucalyptus grandis HOM05D004473 ORTHO05D005652 7.5e-11 70.1 95 44.2
DCAR_032465 Daucus carota HOM05D004473 ORTHO05D005652 3.7e-10 67.8 95 40.0
Hma1.2p1_4210F.1_g338470 Hydrangea macrophylla HOM05D004473 ORTHO05D005652 4.8e-10 67.4 95 41.1
Lj2P1238T61 Lonicera japonica HOM05D004473 ORTHO05D005652 3.1e-09 64.7 95 42.1
Lj2P1239T154 Lonicera japonica HOM05D004473 ORTHO05D005652 3.1e-09 64.7 95 42.1
Hund29400 Selenicereus undatus HOM05D004473 ORTHO05D005652 4.1e-09 64.3 81 44.4
Hund30056 Selenicereus undatus HOM05D004473 ORTHO05D005652 4.1e-09 64.3 81 44.4
PGR111G0117 Punica granatum HOM05D004473 ORTHO05D005652 7.0e-09 63.5 95 43.2
Eucgr.D00924 Eucalyptus grandis HOM05D004473 ORTHO05D005652 1.2e-08 62.8 95 40.0
GSVIVG01022429001 Vitis vinifera HOM05D004473 ORTHO05D005652 1.6e-08 62.4 66 48.5
Hund10282 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.5e-08 61.2 95 38.9
Lsat_1_v5_gn_2_89740 Lactuca sativa HOM05D004473 ORTHO05D005652 4.5e-08 60.8 95 37.9
Medtr3g035685 Medicago truncatula HOM05D004473 ORTHO05D005652 4.5e-08 60.8 94 37.2
Medtr4g051280 Medicago truncatula HOM05D004473 ORTHO05D005652 4.5e-08 60.8 94 37.2
Nn2g10392 Nelumbo nucifera HOM05D004473 ORTHO05D005652 4.5e-08 60.8 79 43.0
RcHm_v2.0_CPg0502521 Rosa chinensis HOM05D004473 ORTHO05D005652 1.7e-07 58.9 39 66.7
Hund25918 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.7e-07 58.9 95 37.9
Hund27810 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.7e-07 58.9 95 37.9
Hund28272 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.7e-07 58.9 95 37.9
Hund29000 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.7e-07 58.9 95 37.9
Hund29405 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.7e-07 58.9 95 37.9
Hund29659 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.7e-07 58.9 95 37.9
Hund29926 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.7e-07 58.9 95 37.9
Hund30352 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.7e-07 58.9 95 37.9
EL10As2g23210 Beta vulgaris HOM05D004473 ORTHO05D005652 2.9e-07 58.2 95 35.8
LjContig00318g0021272 Lotus japonicus HOM05D004473 ORTHO05D005652 3.8e-07 57.8 75 42.7
SalBow1G8010 Salvia bowleyana HOM05D004473 ORTHO05D005652 5.0e-07 57.4 94 38.3
Duzib147G0859 Durio zibethinus HOM05D004473 ORTHO05D005696 8.6e-07 56.6 80 43.8
HanXRQChr00c0125g0571751 Helianthus annuus HOM05D004473 ORTHO05D005652 1.1e-06 56.2 95 36.8
HanXRQChr00c0368g0574161 Helianthus annuus HOM05D004473 ORTHO05D005652 1.1e-06 56.2 95 36.8
HanXRQChr11g0326581 Helianthus annuus HOM05D004473 ORTHO05D005652 1.1e-06 56.2 95 36.8
HanXRQCPg0579741 Helianthus annuus HOM05D004473 ORTHO05D005652 1.1e-06 56.2 95 36.8
Potri.013G138201 Populus trichocarpa HOM05D004473 ORTHO05D005652 2.5e-06 55.1 99 37.4


User provided reference genes

Program Settings