Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.005G245800 Gossypium raimondii HOM05D006691 ORTHO05D007620 4.7e-39 164.1 84 100.0
Gohir.D02G217900 Gossypium hirsutum HOM05D006691 ORTHO05D007620 5.2e-38 160.6 84 97.6
Gohir.A03G196700 Gossypium hirsutum HOM05D006691 ORTHO05D007620 2.0e-37 158.7 84 97.6
Thecc.02G080700 Theobroma cacao HOM05D006691 ORTHO05D007620 9.2e-27 123.2 82 78.0
Duzib248G1522 Durio zibethinus HOM05D006691 ORTHO05D007620 1.6e-26 122.5 82 78.0
COL.COLO4_25981 Corchorus olitorius HOM05D006691 ORTHO05D007620 2.7e-26 121.7 85 76.5
Gorai.013G035000 Gossypium raimondii HOM05D006691 ORTHO05D007620 1.7e-25 119.0 82 72.0
Gohir.A13G032600 Gossypium hirsutum HOM05D006691 ORTHO05D007620 3.0e-25 118.2 82 72.0
Gohir.D13G030800 Gossypium hirsutum HOM05D006691 ORTHO05D007620 5.0e-25 117.5 82 70.7
Duzib132G0715 Durio zibethinus HOM05D006691 ORTHO05D007620 6.2e-23 110.5 83 69.9
Dinv23490 Davidia involucrata HOM05D006691 ORTHO05D007620 8.3e-20 100.1 88 65.9
Ciclev10030122m.g Citrus clementina HOM05D006691 ORTHO05D007620 1.4e-19 99.4 85 67.1
QL11p045203 Quercus lobata HOM05D006691 ORTHO05D007620 3.2e-19 98.2 90 62.2
FAN15G0999 Fragaria x ananassa HOM05D006691 ORTHO05D007620 7.1e-19 97.1 90 61.1
Prupe.8G091200 Prunus persica HOM05D006691 ORTHO05D007620 7.1e-19 97.1 83 63.9
FAN27G2049 Fragaria x ananassa HOM05D006691 ORTHO05D007620 1.2e-18 96.3 90 63.3
Potri.009G119900 Populus trichocarpa HOM05D006691 ORTHO05D007620 1.2e-18 96.3 90 62.2
Manes.04G087299 Manihot esculenta HOM05D006691 ORTHO05D007620 2.7e-18 95.1 88 61.4
Lj1g0004010 Lotus japonicus HOM05D006691 ORTHO05D007620 3.5e-18 94.7 85 62.4
MD10G1069300 Malus domestica HOM05D006691 ORTHO05D007620 3.5e-18 94.7 83 62.7
FvH4_2g09570 Fragaria vesca HOM05D006691 ORTHO05D007620 4.6e-18 94.4 90 63.3
FAN24G2625 Fragaria x ananassa HOM05D006691 ORTHO05D007620 4.6e-18 94.4 90 63.3
Manes.11G091700 Manihot esculenta HOM05D006691 ORTHO05D007620 4.6e-18 94.4 88 60.2
MD05G1061400 Malus domestica HOM05D006691 ORTHO05D007620 7.8e-18 93.6 88 61.4
CiPaw.06G132900 Carya illinoinensis HOM05D006691 ORTHO05D007620 1.0e-17 93.2 88 61.4
Dinv42040 Davidia involucrata HOM05D006691 ORTHO05D007620 1.0e-17 93.2 88 60.2
FAN20G2766 Fragaria x ananassa HOM05D006691 ORTHO05D007620 1.3e-17 92.8 90 61.1
Eucgr.I01291 Eucalyptus grandis HOM05D006691 ORTHO05D007620 1.7e-17 92.4 87 58.6
RcHm_v2.0_Chr6g0265861 Rosa chinensis HOM05D006691 ORTHO05D007620 2.3e-17 92.0 90 65.6
CAN.G1544.5 Capsicum annuum HOM05D006691 ORTHO05D007620 3.0e-17 91.7 84 66.7
Peaxi162Scf00016g00429 Petunia axillaris HOM05D006691 ORTHO05D007620 3.9e-17 91.3 92 59.8
Sopen01g052090 Solanum pennellii HOM05D006691 ORTHO05D007620 3.9e-17 91.3 82 62.2
Nitab4.5_0013456g0010 Nicotiana tabacum HOM05D006691 ORTHO05D007620 5.1e-17 90.9 89 61.8
Medtr8g037800 Medicago truncatula HOM05D006691 ORTHO05D007620 8.6e-17 90.1 89 58.4
TAR628G0615 Trochodendron aralioides HOM05D006691 ORTHO05D007620 1.5e-16 89.4 86 59.3
Lj3g0013236 Lotus japonicus HOM05D006691 ORTHO05D007620 3.3e-16 88.2 84 59.5
Nitab4.5_0001413g0050 Nicotiana tabacum HOM05D006691 ORTHO05D007620 3.3e-16 88.2 90 60.0
Actinidia00546 Actinidia chinensis HOM05D006691 ORTHO05D007620 4.3e-16 87.8 81 61.7
Psat4g192840 Pisum sativum HOM05D006691 ORTHO05D007620 4.3e-16 87.8 86 60.5
Glyma.13G201100 Glycine max HOM05D006691 ORTHO05D007620 7.3e-16 87.0 90 58.9
Hma1.2p1_0066F.1_g036140 Hydrangea macrophylla HOM05D006691 ORTHO05D007620 9.5e-16 86.7 84 59.5
Nitab4.5_0003234g0120 Nicotiana tabacum HOM05D006691 ORTHO05D007620 9.5e-16 86.7 85 57.6
Solyc01g109895.1 Solanum lycopersicum HOM05D006691 ORTHO05D007620 9.5e-16 86.7 83 61.4
TPR.G1848 Trifolium pratense HOM05D006691 ORTHO05D007620 9.5e-16 86.7 89 56.2
GSVIVG01023821001 Vitis vinifera HOM05D006691 ORTHO05D007620 9.5e-16 86.7 91 57.1
TWI79G1416 Tripterygium wilfordii HOM05D006691 ORTHO05D007620 1.6e-15 85.9 87 56.3
PGSC0003DMG400030948 Solanum tuberosum HOM05D006691 ORTHO05D007620 2.1e-15 85.5 83 60.2
Lalb_Chr01g0007961 Lupinus albus HOM05D006691 ORTHO05D007620 2.8e-15 85.1 89 55.1
Nitab4.5_0007454g0010 Nicotiana tabacum HOM05D006691 ORTHO05D007620 3.6e-15 84.7 86 57.0
Phvul.011G210100 Phaseolus vulgaris HOM05D006691 ORTHO05D007620 6.2e-15 84.0 89 55.1
ClCG11G004170 Citrullus lanatus HOM05D006691 ORTHO05D007620 5.2e-14 80.9 83 61.4
TWI31G1476 Tripterygium wilfordii HOM05D006691 ORTHO05D007620 5.2e-14 80.9 86 54.7
Cc00_g15110 Coffea canephora HOM05D006691 ORTHO05D007620 8.9e-14 80.1 89 53.9
PSO591G0314 Papaver somniferum HOM05D006691 ORTHO05D007620 8.9e-14 80.1 96 53.1
PSO675G5127 Papaver somniferum HOM05D006691 ORTHO05D007620 8.9e-14 80.1 96 53.1
CsaV3_2G015000 Cucumis sativus L. HOM05D006691 ORTHO05D007620 2.0e-13 79.0 82 52.4
Migut.B00211 Erythranthe guttata HOM05D006691 ORTHO05D007620 3.4e-13 78.2 83 56.6
MELO3C023320.2 Cucumis melo HOM05D006691 ORTHO05D007620 4.4e-13 77.8 83 56.6
PGR042G3893 Punica granatum HOM05D006691 ORTHO05D007620 4.4e-13 77.8 87 54.0
SalBow6G5689 Salvia bowleyana HOM05D006691 ORTHO05D007620 4.4e-13 77.8 89 50.6
Aqoxy5G01556 Aquilegia oxysepala HOM05D006691 ORTHO05D007620 1.3e-12 76.3 88 53.4
THA.LOC104819621 Tarenaya hassleriana HOM05D006691 ORTHO05D007620 2.2e-12 75.5 83 49.4
CiPaw.05G069300 Carya illinoinensis HOM05D006691 ORTHO05D007620 2.9e-12 75.1 58 63.8
Rhsim05G0071400 Rhododendron simsii HOM05D006691 ORTHO05D007620 2.9e-12 75.1 86 53.5
arahy.Tifrunner.gnm1.ann1.43WB82 Arachis hypogaea HOM05D006691 ORTHO05D007620 3.8e-12 74.7 88 51.1
HanXRQChr04g0127791 Helianthus annuus HOM05D006691 ORTHO05D007620 3.8e-12 74.7 86 50.0
CANSAT11G0932 Cannabis sativa HOM05D006691 ORTHO05D007620 4.9e-12 74.3 89 51.7
CiPaw.05G069100 Carya illinoinensis HOM05D006691 ORTHO05D007620 1.1e-11 73.2 58 65.5
CSS0036321 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 1.4e-11 72.8 83 54.2
CiPaw.05G069400 Carya illinoinensis HOM05D006691 ORTHO05D007620 1.4e-11 72.8 55 65.5
MBI16_g36843_MAGBIO Magnolia biondii HOM05D006691 ORTHO05D007620 2.4e-11 72.0 88 46.6
CSS0048821 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 3.2e-11 71.6 94 50.0
Hund06253 Selenicereus undatus HOM05D006691 ORTHO05D007620 3.2e-11 71.6 88 45.5
Glyma.12G235600 Glycine max HOM05D006691 ORTHO05D007620 4.1e-11 71.2 67 61.2
Peaxi162Scf00684g00234 Petunia axillaris HOM05D006691 ORTHO05D007620 4.1e-11 71.2 81 59.3
Sed0023451 Sechium edule HOM05D006691 ORTHO05D007620 4.1e-11 71.2 91 45.1
Lsat_1_v5_gn_7_91560 Lactuca sativa HOM05D006691 ORTHO05D007620 1.2e-10 69.7 86 48.8
Eucgr.G01694 Eucalyptus grandis HOM05D006691 ORTHO05D007620 2.7e-10 68.6 95 44.2
Sc18g0005100 Simmondsia chinensis HOM05D006691 ORTHO05D007620 2.7e-10 68.6 90 44.4
AT2G16385 Arabidopsis thaliana HOM05D006691 ORTHO05D007620 6.0e-10 67.4 85 48.2
arahy.Tifrunner.gnm1.ann1.D742FH Arachis hypogaea HOM05D006691 ORTHO05D007620 1.7e-09 65.9 37 78.4
CSS0004191 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 3.9e-09 64.7 81 50.6
ATR0585G050 Amborella trichopoda HOM05D006691 ORTHO05D007620 6.6e-09 63.9 85 45.9
A01p03880 Brassica napus HOM05D006691 ORTHO05D007620 8.7e-09 63.5 81 46.9
CARHR242800 Cardamine hirsuta HOM05D006691 ORTHO05D007620 8.7e-09 63.5 81 44.4
HanXRQChr16g0505401 Helianthus annuus HOM05D006691 ORTHO05D007620 8.7e-09 63.5 88 42.0
BcaNung00683 Brassica carinata HOM05D006691 ORTHO05D007620 1.1e-08 63.2 81 46.9
C01p04190 Brassica napus HOM05D006691 ORTHO05D007620 1.1e-08 63.2 81 46.9
BraA01t00375Z Brassica rapa HOM05D006691 ORTHO05D007620 1.5e-08 62.8 81 46.9
COL.COLO4_25982 Corchorus olitorius HOM05D066844 ORTHO05D007620 1.9e-08 62.4 71 56.3
AL3G52540 Arabidopsis lyrata HOM05D006691 ORTHO05D007620 2.5e-08 62.0 81 45.7
BcaNung04921 Brassica carinata HOM05D006691 ORTHO05D007620 7.3e-08 60.5 81 44.4
Carub.0007s0568 Capsella rubella HOM05D006691 ORTHO05D007620 7.3e-08 60.5 81 44.4
MBI10_g00752_MAGBIO Magnolia biondii HOM05D006691 ORTHO05D007620 7.3e-08 60.5 33 81.8
DCAR_001560 Daucus carota HOM05D006691 ORTHO05D007620 9.6e-08 60.1 78 44.9
Ah.01g019150 Amaranthus hybridus HOM05D001345 ORTHO05D001190 2.1e-07 58.9 69 49.3
AL7G16600 Arabidopsis lyrata HOM05D006691 ORTHO05D007620 3.6e-07 58.2 81 40.7
Carub.0003s3015 Capsella rubella HOM05D006691 ORTHO05D007620 3.6e-07 58.2 86 45.3
Glyma.06G010000 Glycine max HOM05D006691 ORTHO05D007620 3.6e-07 58.2 80 46.2
Glyma.08G235100 Glycine max HOM05D006691 ORTHO05D007620 3.6e-07 58.2 73 46.6
arahy.Tifrunner.gnm1.ann1.GKZX65 Arachis hypogaea HOM05D006691 ORTHO05D007620 4.7e-07 57.8 93 41.9
Thhalv10026702m.g Eutrema salsugineum HOM05D006691 ORTHO05D007620 6.2e-07 57.4 81 40.7
BolC1t00407H Brassica oleracea HOM05D006691 ORTHO05D007620 8.1e-07 57.0 83 42.2
arahy.Tifrunner.gnm1.ann1.JP7MPK Arachis hypogaea HOM05D006691 ORTHO05D007620 1.1e-06 56.6 93 41.9
HPP92_010634 Vanilla planifolia HOM05D006691 ORTHO05D007620 1.4e-06 56.2 83 37.3
A03p63030 Brassica napus HOM05D006691 ORTHO05D007620 1.8e-06 55.8 81 39.5
BraA03t15377Z Brassica rapa HOM05D006691 ORTHO05D007620 1.8e-06 55.8 81 39.5
Sp7g32390 Schrenkiella parvula HOM05D006691 ORTHO05D007620 3.1e-06 55.1 67 43.3
C07p60660 Brassica napus HOM05D006691 ORTHO05D007620 6.9e-06 53.9 81 39.5
BolC7t46496H Brassica oleracea HOM05D006691 ORTHO05D007620 6.9e-06 53.9 81 39.5
Lalb_Chr03g0032901 Lupinus albus HOM05D006691 ORTHO05D007620 9.0e-06 53.5 36 61.1


User provided reference genes

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