Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.D02G213100 Gossypium hirsutum HOM05D008353 ORTHO05D001895 1.5e-65 252.7 122 100.0
Gorai.005G241000 Gossypium raimondii HOM05D008353 ORTHO05D001895 1.5e-65 252.7 122 100.0
Gohir.A03G192300 Gossypium hirsutum HOM05D008353 ORTHO05D001895 3.9e-58 228.0 120 92.5
Gohir.A03G192200 Gossypium hirsutum HOM05D008353 ORTHO05D001895 5.2e-47 191.0 120 80.0
Gohir.D02G213200 Gossypium hirsutum HOM05D008353 ORTHO05D001895 2.6e-46 188.7 120 78.3
Gorai.005G241100 Gossypium raimondii HOM05D008353 ORTHO05D001895 5.8e-46 187.6 120 77.5
Thecc.02G092000 Theobroma cacao HOM05D008353 ORTHO05D001895 2.3e-34 149.1 127 60.6
Thecc.02G091500 Theobroma cacao HOM05D008353 ORTHO05D001895 2.8e-32 142.1 127 58.3
Thecc.02G091800 Theobroma cacao HOM05D008353 ORTHO05D001895 5.8e-30 134.4 126 52.4
COL.COLO4_11746 Corchorus olitorius HOM05D008353 ORTHO05D001895 4.6e-27 124.8 128 51.6
Manes.07G021800 Manihot esculenta HOM05D008353 ORTHO05D001895 3.0e-18 95.5 126 43.7
Thecc.07G072800 Theobroma cacao HOM05D008353 ORTHO05D001895 3.3e-17 92.0 134 38.8
Atru.chr13.1023 Acer truncatum HOM05D008353 ORTHO05D001895 4.3e-17 91.7 120 41.7
Atru.chr13.1025 Acer truncatum HOM05D008353 ORTHO05D001895 5.6e-17 91.3 120 41.7
Potri.004G220400 Populus trichocarpa HOM05D008353 ORTHO05D001895 6.2e-16 87.8 119 39.5
Manes.07G021400 Manihot esculenta HOM05D008353 ORTHO05D001895 8.1e-16 87.4 119 41.2
Potri.003G010763 Populus trichocarpa HOM05D008353 ORTHO05D001895 8.1e-16 87.4 120 37.5
Potri.004G220550 Populus trichocarpa HOM05D008353 ORTHO05D001895 8.1e-16 87.4 119 39.5
Potri.004G220700 Populus trichocarpa HOM05D008353 ORTHO05D001895 8.1e-16 87.4 119 39.5
Manes.07G022000 Manihot esculenta HOM05D008353 ORTHO05D001895 1.4e-15 86.7 127 40.2
Manes.10G124700 Manihot esculenta HOM05D008353 ORTHO05D011820 1.8e-15 86.3 119 37.0
Manes.10G123900 Manihot esculenta HOM05D008353 ORTHO05D001895 4.0e-15 85.1 121 38.8
Manes.10G124100 Manihot esculenta HOM05D008353 ORTHO05D001895 4.0e-15 85.1 121 38.8
Thecc.02G092100 Theobroma cacao HOM05D002599 ORTHO05D001895 4.5e-14 81.6 121 38.0
Potri.003G011200 Populus trichocarpa HOM05D008353 ORTHO05D001895 7.6e-14 80.9 123 33.3
Sabra01G0167300 Salix brachista HOM05D008353 ORTHO05D001895 7.6e-14 80.9 122 38.5
Sabra01G0166900 Salix brachista HOM05D008353 ORTHO05D001895 9.9e-14 80.5 122 38.5
Sabra01G0167000 Salix brachista HOM05D008353 ORTHO05D001895 6.4e-13 77.8 119 36.1
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 4.2e-12 75.1 121 33.9
Atru.chr8.2426 Acer truncatum HOM05D008353 ORTHO05D001895 5.4e-12 74.7 123 37.4
Gohir.A12G043200 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.1e-12 74.3 121 37.2
Gohir.D10G101400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.6e-11 73.2 123 32.5
Thecc.02G026400 Theobroma cacao HOM05D002599 ORTHO05D001895 1.6e-11 73.2 121 33.9
Gorai.008G044600 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.1e-11 72.8 121 37.2
Gohir.D12G042600 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.7e-11 72.4 121 37.2
Gorai.011G111100 Gossypium raimondii HOM05D002599 ORTHO05D001895 4.6e-11 71.6 123 31.7
Thecc.02G091900 Theobroma cacao HOM05D008353 ORTHO05D011820 4.6e-11 71.6 119 37.8
COL.COLO4_25716 Corchorus olitorius HOM05D002599 ORTHO05D001895 6.0e-11 71.2 120 30.8
Gohir.A10G235900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.0e-11 71.2 123 33.3
COL.COLO4_11745 Corchorus olitorius HOM05D002599 ORTHO05D001895 7.9e-11 70.9 121 33.1
Thecc.10G017400 Theobroma cacao HOM05D002599 ORTHO05D001895 7.9e-11 70.9 123 32.5
Gohir.A01G005400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.3e-10 70.1 123 33.3
Thecc.02G091700 Theobroma cacao HOM05D008353 ORTHO05D011820 1.8e-10 69.7 116 36.2
Thecc.02G026500 Theobroma cacao HOM05D002599 ORTHO05D001895 3.0e-10 68.9 121 33.9
Gorai.011G286700 Gossypium raimondii HOM05D002599 ORTHO05D001895 3.9e-10 68.6 120 34.2
Gorai.002G006400 Gossypium raimondii HOM05D002599 ORTHO05D001895 5.1e-10 68.2 123 33.3
Sabra15G0012100 Salix brachista HOM05D002599 ORTHO05D001895 5.1e-10 68.2 116 31.9
COL.COLO4_11748 Corchorus olitorius HOM05D008353 ORTHO05D001895 6.7e-10 67.8 123 35.0
Gohir.D01G005500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.7e-10 67.8 123 33.3
Thecc.02G026300 Theobroma cacao HOM05D002599 ORTHO05D001895 6.7e-10 67.8 121 32.2
Thecc.02G091400 Theobroma cacao HOM05D008353 ORTHO05D011820 8.7e-10 67.4 116 37.1
Thecc.10G017800 Theobroma cacao HOM05D002599 ORTHO05D001895 8.7e-10 67.4 122 32.0
Potri.015G015650 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.3e-09 65.5 116 31.0
Gohir.A10G055200 Gossypium hirsutum HOM05D008353 ORTHO05D011820 4.3e-09 65.1 120 33.3
Potri.015G015501 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.3e-09 65.1 116 30.2
Manes.10G124500 Manihot esculenta HOM05D002599 ORTHO05D001895 7.4e-09 64.3 118 33.1
Gohir.D10G057000 Gossypium hirsutum HOM05D008353 ORTHO05D011820 9.6e-09 63.9 120 32.5
Potri.004G219800 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.3e-08 63.5 123 30.9
Atru.chr6.125 Acer truncatum HOM05D002599 ORTHO05D001895 2.1e-08 62.8 89 37.1
Gorai.011G060600 Gossypium raimondii HOM05D008353 ORTHO05D011820 2.1e-08 62.8 123 35.0
Gorai.011G060900 Gossypium raimondii HOM05D008353 ORTHO05D011820 2.1e-08 62.8 120 31.7
Gohir.A10G054800 Gossypium hirsutum HOM05D008353 ORTHO05D011820 2.8e-08 62.4 123 35.0
Gohir.D10G056800 Gossypium hirsutum HOM05D008353 ORTHO05D011820 2.8e-08 62.4 123 35.0
Potri.015G014850 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.8e-08 62.4 117 32.5
Gohir.A10G055250 Gossypium hirsutum HOM05D008353 ORTHO05D011820 3.7e-08 62.0 120 31.7
Gorai.011G061300 Gossypium raimondii HOM05D008353 ORTHO05D011820 3.7e-08 62.0 120 31.7
Sabra12G0018100 Salix brachista HOM05D002599 ORTHO05D001895 3.7e-08 62.0 117 34.2
Manes.10G124600 Manihot esculenta HOM05D002599 ORTHO05D001895 4.8e-08 61.6 111 35.1
Gohir.D10G057200 Gossypium hirsutum HOM05D008353 ORTHO05D011820 8.1e-08 60.8 120 30.8
Potri.004G219450 Populus trichocarpa HOM05D002599 ORTHO05D001895 8.1e-08 60.8 119 26.1
Potri.015G015800 Populus trichocarpa HOM05D002599 ORTHO05D001895 8.1e-08 60.8 116 27.6
Prupe.1G574300 Prunus persica HOM05D002599 ORTHO05D001895 8.1e-08 60.8 108 35.2
Gohir.A10G054950 Gossypium hirsutum HOM05D008353 ORTHO05D011820 1.1e-07 60.5 120 30.0
Gorai.011G060700 Gossypium raimondii HOM05D008353 ORTHO05D011820 1.1e-07 60.5 119 29.4
Potri.012G013000 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.1e-07 60.5 116 30.2
Sabra15G0012300 Salix brachista HOM05D002599 ORTHO05D001895 1.8e-07 59.7 120 30.0
Thecc.02G092200 Theobroma cacao HOM05D002599 ORTHO05D001895 1.8e-07 59.7 116 28.4
Gorai.011G061000 Gossypium raimondii HOM05D008353 ORTHO05D011820 2.4e-07 59.3 120 32.5
Thecc.02G023500 Theobroma cacao HOM05D002599 ORTHO05D001895 2.4e-07 59.3 114 29.8
Gohir.D10G056900 Gossypium hirsutum HOM05D008353 ORTHO05D011820 3.1e-07 58.9 119 29.4
Potri.014G068000 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.1e-07 58.9 119 29.4
Potri.015G015275 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.1e-07 58.9 113 32.7
Sabra15G0012400 Salix brachista HOM05D002599 ORTHO05D001895 3.1e-07 58.9 120 30.0
Atru.chr6.704 Acer truncatum HOM05D002599 ORTHO05D001895 4.0e-07 58.5 91 36.3
Gohir.1Z049336 Gossypium hirsutum HOM05D008353 ORTHO05D011820 4.0e-07 58.5 120 31.7
Gohir.D10G057100 Gossypium hirsutum HOM05D008353 ORTHO05D011820 4.0e-07 58.5 120 31.7
Potri.015G126301 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.0e-07 58.5 106 31.1
Gohir.A10G054900 Gossypium hirsutum HOM05D008353 ORTHO05D011820 5.3e-07 58.2 115 29.6
Gohir.D02G236400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.3e-07 58.2 123 28.5
Gorai.005G264500 Gossypium raimondii HOM05D002599 ORTHO05D001895 5.3e-07 58.2 123 28.5
Atru.chr6.323 Acer truncatum HOM05D002599 ORTHO05D001895 6.9e-07 57.8 83 34.9
Potri.012G013501 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.9e-07 57.8 116 28.4
COL.COLO4_11747 Corchorus olitorius HOM05D008353 ORTHO05D011820 9.0e-07 57.4 121 35.5
COL.COLO4_17739 Corchorus olitorius HOM05D002599 ORTHO05D001895 9.0e-07 57.4 116 30.2
Gohir.A03G214900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 9.0e-07 57.4 117 28.2
Gohir.D12G021800 Gossypium hirsutum HOM05D008353 ORTHO05D011820 9.0e-07 57.4 118 27.1
Sabra15G0012200 Salix brachista HOM05D002599 ORTHO05D001895 1.2e-06 57.0 122 30.3
Sabra15G0012000 Salix brachista HOM05D002599 ORTHO05D001895 1.5e-06 56.6 105 29.5
Gorai.008G022100 Gossypium raimondii HOM05D008353 ORTHO05D011820 4.5e-06 55.1 118 26.3
Gohir.A10G055150 Gossypium hirsutum HOM05D008353 ORTHO05D011820 1.0e-05 53.9 124 33.1
Potri.004G218101 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.0e-05 53.9 120 28.3
Potri.014G067900 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.0e-05 53.9 117 30.8


User provided reference genes

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