Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A03G184200 Gossypium hirsutum HOM05D007407 ORTHO05D009298 6.2e-70 267.3 133 100.0
Gohir.D02G205700 Gossypium hirsutum HOM05D007407 ORTHO05D009298 6.2e-70 267.3 133 100.0
Gorai.005G233100 Gossypium raimondii HOM05D007407 ORTHO05D009298 6.2e-70 267.3 133 100.0
Duzib052G0893 Durio zibethinus HOM05D007407 ORTHO05D009298 1.4e-66 256.1 133 93.2
Thecc.02G113100 Theobroma cacao HOM05D007407 ORTHO05D009298 3.2e-66 255.0 133 94.0
Aqoxy6G02771 Aquilegia oxysepala HOM05D007407 ORTHO05D009298 3.4e-60 235.0 133 84.2
GSVIVG01037877001 Vitis vinifera HOM05D007407 ORTHO05D009298 5.9e-60 234.2 133 83.5
Atru.chr5.2418 Acer truncatum HOM05D007407 ORTHO05D009298 1.7e-59 232.6 133 85.7
QL11p032060 Quercus lobata HOM05D007407 ORTHO05D009298 8.5e-59 230.3 132 85.6
CiPaw.05G014900 Carya illinoinensis HOM05D007407 ORTHO05D009298 1.9e-58 229.2 133 84.2
Potri.009G091800 Populus trichocarpa HOM05D007407 ORTHO05D009298 2.5e-58 228.8 133 84.2
RcHm_v2.0_Chr6g0254151 Rosa chinensis HOM05D007407 ORTHO05D009298 2.5e-58 228.8 133 84.2
TAR628G1347 Trochodendron aralioides HOM05D007407 ORTHO05D009298 3.2e-58 228.4 133 82.7
AUR62008735 Chenopodium quinoa HOM05D007407 ORTHO05D009298 4.2e-58 228.0 133 80.5
Hma1.2p1_1023F.1_g248940 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 5.5e-58 227.6 131 82.4
Ciclev10029563m.g Citrus clementina HOM05D007407 ORTHO05D009298 9.4e-58 226.9 133 82.0
Actinidia34378 Actinidia chinensis HOM05D007407 ORTHO05D009298 1.6e-57 226.1 131 82.4
Sabra09G0070800 Salix brachista HOM05D007407 ORTHO05D009298 1.6e-57 226.1 133 83.5
MSTRG.27752 Avicennia marina HOM05D007407 ORTHO05D009298 3.6e-57 224.9 133 79.7
ClCG10G010580 Citrullus lanatus HOM05D007407 ORTHO05D009298 4.6e-57 224.6 133 81.2
RhsimUnG0126400 Rhododendron simsii HOM05D007407 ORTHO05D009298 6.1e-57 224.2 130 83.1
MD10G1101800 Malus domestica HOM05D007407 ORTHO05D009298 1.4e-56 223.0 131 81.7
CAN.G13.9 Capsicum annuum HOM05D007407 ORTHO05D009298 1.8e-56 222.6 133 78.9
Nn1g04637 Nelumbo nucifera HOM05D007407 ORTHO05D009298 3.9e-56 221.5 133 80.5
CsaV3_4G000500 Cucumis sativus L. HOM05D007407 ORTHO05D009298 5.1e-56 221.1 133 81.2
Sc18g0003630 Simmondsia chinensis HOM05D007407 ORTHO05D009298 5.1e-56 221.1 133 79.7
Psat5g233480 Pisum sativum HOM05D007407 ORTHO05D009298 6.7e-56 220.7 133 78.9
Oeu044262.1 Olea europaea HOM05D007407 ORTHO05D009298 2.0e-55 219.2 127 81.1
Cpa.g.c35560 Carica papaya HOM05D007407 ORTHO05D009298 2.5e-55 218.8 140 79.3
FAN15G3071 Fragaria x ananassa HOM05D007407 ORTHO05D009298 2.5e-55 218.8 133 80.5
FvH4_2g04570 Fragaria vesca HOM05D007407 ORTHO05D009298 3.3e-55 218.4 133 78.9
Cc02_g19580 Coffea canephora HOM05D007407 ORTHO05D009298 4.3e-55 218.0 133 78.9
TPR.G5138 Trifolium pratense HOM05D007407 ORTHO05D009298 4.3e-55 218.0 133 76.7
CANSAT25G3533 Cannabis sativa HOM05D007407 ORTHO05D009298 5.7e-55 217.6 133 78.2
FAN27G0322 Fragaria x ananassa HOM05D007407 ORTHO05D009298 7.4e-55 217.2 133 79.7
SalBow3G4546 Salvia bowleyana HOM05D007407 ORTHO05D009298 7.4e-55 217.2 133 75.9
CANSAT25G2132 Cannabis sativa HOM05D007407 ORTHO05D009298 1.3e-54 216.5 133 78.2
Dinv42215 Davidia involucrata HOM05D007407 ORTHO05D009298 1.7e-54 216.1 134 79.1
Lj3g0017118 Lotus japonicus HOM05D007407 ORTHO05D009298 1.7e-54 216.1 133 76.7
Phvul.005G003200 Phaseolus vulgaris HOM05D007407 ORTHO05D009298 2.8e-54 215.3 133 78.2
Sed0024111 Sechium edule HOM05D007407 ORTHO05D009298 3.7e-54 214.9 133 78.2
Migut.I00274 Erythranthe guttata HOM05D007407 ORTHO05D009298 4.1e-53 211.5 133 75.9
TWI59G1341 Tripterygium wilfordii HOM05D007407 ORTHO05D009298 4.1e-53 211.5 139 78.4
EL10Ac6g13315 Beta vulgaris HOM05D007407 ORTHO05D009298 2.6e-52 208.8 133 75.9
Medtr0393s0040 Medicago truncatula HOM05D007407 ORTHO05D009298 2.6e-52 208.8 126 77.0
Peaxi162Scf00152g00338 Petunia axillaris HOM05D007407 ORTHO05D009298 2.6e-52 208.8 133 74.4
Glyma.04G111400 Glycine max HOM05D007407 ORTHO05D009298 3.4e-52 208.4 133 74.4
Sopen11g019840 Solanum pennellii HOM05D007407 ORTHO05D009298 4.5e-52 208.0 133 74.4
HanXRQChr16g0509111 Helianthus annuus HOM05D007407 ORTHO05D009298 3.8e-51 204.9 130 74.6
Rhsim11G0155200 Rhododendron simsii HOM05D007407 ORTHO05D009298 3.8e-51 204.9 113 85.8
Medtr3g010320 Medicago truncatula HOM05D007407 ORTHO05D009298 5.0e-51 204.5 133 74.4
Eucgr.I01082 Eucalyptus grandis HOM05D007407 ORTHO05D009298 6.5e-51 204.1 116 85.3
Duzib132G0979 Durio zibethinus HOM05D007407 ORTHO05D009298 1.4e-50 203.0 128 78.1
DCAR_001669 Daucus carota HOM05D007407 ORTHO05D009298 3.2e-50 201.8 133 71.4
SGA_v2.0_scaffold13G06621 Striga asiatica HOM05D007407 ORTHO05D009298 2.1e-49 199.1 176 58.0
Manes.07G063400 Manihot esculenta HOM05D007407 ORTHO05D009298 3.6e-49 198.4 181 59.1
BraA01t00434Z Brassica rapa HOM05D007407 ORTHO05D009298 6.7e-48 194.1 133 70.7
Nitab4.5_0000088g0130 Nicotiana tabacum HOM05D007407 ORTHO05D009298 1.5e-47 193.0 114 76.3
Thhalv10026553m.g Eutrema salsugineum HOM05D007407 ORTHO05D009298 3.3e-47 191.8 133 69.2
Lsat_1_v5_gn_7_86121 Lactuca sativa HOM05D007407 ORTHO05D009298 5.7e-47 191.0 113 78.8
Aa31sc211G10 Aethionema arabicum HOM05D007407 ORTHO05D009298 7.4e-47 190.7 133 69.9
Glyma.06G322800 Glycine max HOM05D007407 ORTHO05D009298 9.7e-47 190.3 196 54.1
arahy.Tifrunner.gnm1.ann1.2Y2YM1 Arachis hypogaea HOM05D007407 ORTHO05D009298 1.3e-46 189.9 133 68.4
CARHR242020 Cardamine hirsuta HOM05D007407 ORTHO05D009298 1.3e-46 189.9 133 68.4
Sp7g31660 Schrenkiella parvula HOM05D007407 ORTHO05D009298 1.3e-46 189.9 133 69.2
vmacro01981 Vaccinium macrocarpon HOM05D007407 ORTHO05D009298 1.7e-46 189.5 128 75.0
Carub.0007s0650 Capsella rubella HOM05D007407 ORTHO05D009298 2.8e-46 188.7 133 68.4
Lalb_Chr18g0048491 Lupinus albus HOM05D007407 ORTHO05D009298 2.8e-46 188.7 133 66.9
arahy.Tifrunner.gnm1.ann1.D6X9Y4 Arachis hypogaea HOM05D007407 ORTHO05D009298 3.7e-46 188.3 133 67.7
AL7G17500 Arabidopsis lyrata HOM05D007407 ORTHO05D009298 3.1e-45 185.3 133 67.7
AT4G33925 Arabidopsis thaliana HOM05D007407 ORTHO05D009298 3.1e-45 185.3 133 67.7
Hund12642 Selenicereus undatus HOM05D007407 ORTHO05D009298 6.5e-43 177.6 101 80.2
VMungo1080G0753 Vigna mungo HOM05D007407 ORTHO05D009298 3.2e-42 175.3 105 79.0
C01p04860 Brassica napus HOM05D007407 ORTHO05D009298 5.5e-42 174.5 137 63.5
SHI05205 Sapria himalayana HOM05D007407 ORTHO05D009298 1.6e-41 172.9 101 80.2
THA.LOC104807229 Tarenaya hassleriana HOM05D007407 ORTHO05D009298 8.0e-41 170.6 105 76.2
ECA236G1324 Erigeron canadensis HOM05D007407 ORTHO05D009298 1.5e-39 166.4 98 79.6
SEGI_09286 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 1.5e-39 166.4 129 60.5
HPP92_010144 Vanilla planifolia HOM05D007407 ORTHO05D009298 5.7e-39 164.5 127 59.8
Nitab4.5_0000700g0060 Nicotiana tabacum HOM05D007407 ORTHO05D009298 1.3e-38 163.3 105 73.3
BolC1t00470H Brassica oleracea HOM05D007407 ORTHO05D009298 1.7e-38 162.9 105 72.4
MD05G1094600 Malus domestica HOM05D007407 ORTHO05D009298 4.8e-38 161.4 99 76.8
Solyc11g044330.3 Solanum lycopersicum HOM05D007407 ORTHO05D009298 4.1e-37 158.3 98 75.5
Zm00001eb326460 Zea mays HOM05D007407 ORTHO05D009298 5.3e-37 157.9 128 59.4
PGSC0003DMG400023130 Solanum tuberosum HOM05D007407 ORTHO05D009298 3.5e-36 155.2 92 77.2
Prupe.8G139500 Prunus persica HOM05D007407 ORTHO05D009298 8.8e-32 140.6 133 60.2
Hma1.2p1_1023F.1_g248930 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 1.2e-31 140.2 133 59.4
Pp3c22_18210 Physcomitrium patens HOM05D007407 ORTHO05D009298 6.3e-30 134.4 122 52.5
Mapoly0083s0061 Marchantia polymorpha HOM05D007407 ORTHO05D009298 4.2e-26 121.7 114 44.7
AagrBONN_evm.TU.Sc2ySwM_228.2221 Anthoceros agrestis HOM05D007407 ORTHO05D009298 2.3e-24 115.9 111 51.4
Manes.07G065401 Manihot esculenta HOM05D007407 ORTHO05D009298 4.0e-24 115.2 70 77.1
SMO330G0043 Selaginella moellendorffii HOM05D007407 ORTHO05D009298 1.1e-21 107.1 104 49.0
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 1.6e-20 103.2 67 73.1
CBR_g6331 Chara braunii HOM05D007407 ORTHO05D009298 1.6e-20 103.2 111 47.7
Cre16.g668000 Chlamydomonas reinhardtii HOM05D007407 ORTHO05D009298 3.5e-20 102.1 111 47.7
MD00G1205200 Malus domestica HOM05D007407 ORTHO05D009298 2.3e-19 99.4 62 75.8
MCO15G608 Micromonas commoda HOM05D007407 ORTHO05D009298 5.2e-16 88.2 110 41.8
Medtr8g072380 Medicago truncatula HOM05D007407 ORTHO05D009298 6.6e-11 71.2 68 52.9
CBR_g37936 Chara braunii HOM05D019869 ORTHO05D028728 1.6e-09 66.6 78 39.7
COL.COLO4_30985 Corchorus olitorius HOM05D001363 ORTHO05D006255 3.6e-09 65.5 51 68.6
unitig_747.g21223 Utricularia gibba HOM05D007407 ORTHO05D009298 3.6e-09 65.5 47 57.4
Medtr2g093710 Medicago truncatula HOM05D007407 ORTHO05D009298 8.0e-09 64.3 89 39.3
unitig_747.g21224 Utricularia gibba HOM05D007407 ORTHO05D009298 2.0e-07 59.7 36 69.4
SEGI_10413 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 4.4e-07 58.5 34 61.8


User provided reference genes

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