Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.D02G203600 Gossypium hirsutum HOM05D006534 ORTHO05D006434 1.7e-15 85.9 89 100.0
Gorai.005G230700 Gossypium raimondii HOM05D006534 ORTHO05D006434 1.7e-15 85.9 89 100.0
Gohir.A03G181900 Gossypium hirsutum HOM05D006534 ORTHO05D006434 1.5e-14 82.8 89 98.9
Thecc.02G118300 Theobroma cacao HOM05D006534 ORTHO05D006434 2.8e-13 78.6 89 84.3
Duzib248G1096 Durio zibethinus HOM05D006534 ORTHO05D006434 4.9e-10 67.8 89 83.1
TWI59G0168 Tripterygium wilfordii HOM05D006534 ORTHO05D006434 2.4e-09 65.5 90 91.1
Sc08g0004430 Simmondsia chinensis HOM05D006534 ORTHO05D006434 3.1e-09 65.1 91 68.1
Atru.chr5.2330 Acer truncatum HOM05D006534 ORTHO05D006434 4.1e-09 64.7 96 75.0
TWI14G1419 Tripterygium wilfordii HOM05D006534 ORTHO05D006434 4.1e-09 64.7 90 75.6
Solyc09g098300.3 Solanum lycopersicum HOM05D006534 ORTHO05D006434 5.4e-09 64.3 92 88.0
ATR0739G136 Amborella trichopoda HOM05D006534 ORTHO05D006434 9.2e-09 63.5 90 82.2
Actinidia27993 Actinidia chinensis HOM05D006534 ORTHO05D006434 3.5e-08 61.6 94 87.2
Ah.01g007070 Amaranthus hybridus HOM05D006534 ORTHO05D006434 7.8e-08 60.5 102 65.7
PGR042G3724 Punica granatum HOM05D006534 ORTHO05D006434 2.3e-07 58.9 94 75.5
Oeu013796.1 Olea europaea HOM05D006534 ORTHO05D006434 2.9e-07 58.5 92 77.2
Potri.009G086900 Populus trichocarpa HOM05D006534 ORTHO05D006434 3.9e-07 58.2 97 69.1
CiPaw.06G165200 Carya illinoinensis HOM05D006534 ORTHO05D006434 8.6e-07 57.0 92 85.9
ClCG10G010140 Citrullus lanatus HOM05D006534 ORTHO05D006434 8.6e-07 57.0 91 74.7
Gorai.008G020000 Gossypium raimondii HOM05D006534 ORTHO05D006434 1.1e-06 56.6 90 75.6
TPR.G21131 Trifolium pratense HOM05D006534 ORTHO05D006434 1.5e-06 56.2 99 59.6
HPP92_006071 Vanilla planifolia HOM05D006534 ORTHO05D006434 1.5e-06 56.2 89 71.9
Dinv42239 Davidia involucrata HOM05D006534 ORTHO05D006434 1.9e-06 55.8 92 70.7
CSS0021262 Camellia sinensis var. sinensis HOM05D006534 ORTHO05D006434 2.5e-06 55.5 92 88.0
CSS0022822 Camellia sinensis var. sinensis HOM05D006534 ORTHO05D006434 2.5e-06 55.5 92 88.0
AUR62030851 Chenopodium quinoa HOM05D006534 ORTHO05D006434 3.3e-06 55.1 97 78.4
Prupe.6G219500 Prunus persica HOM05D006534 ORTHO05D006434 3.3e-06 55.1 93 75.3
arahy.Tifrunner.gnm1.ann1.VT3BTZ Arachis hypogaea HOM05D006534 ORTHO05D006434 4.3e-06 54.7 90 70.0
CiPaw.05G018800 Carya illinoinensis HOM05D006534 ORTHO05D006434 4.3e-06 54.7 93 71.0
Cfa004668 Carpinus fangiana HOM05D006534 ORTHO05D006434 5.6e-06 54.3 97 81.4
GSVIVG01037814001 Vitis vinifera HOM05D006534 ORTHO05D006434 5.6e-06 54.3 94 73.4
Ciclev10026875m.g Citrus clementina HOM05D006534 ORTHO05D006434 7.3e-06 53.9 89 58.4
MD02G1187200 Malus domestica HOM05D006534 ORTHO05D006434 9.5e-06 53.5 89 68.5


User provided reference genes

Program Settings