Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.005G230100 Gossypium raimondii HOM05D001896 ORTHO05D001862 5.3e-82 307.8 170 100.0
Gohir.D02G203218 Gossypium hirsutum HOM05D001896 ORTHO05D001862 1.1e-79 300.1 170 97.6
Gohir.A03G181250 Gossypium hirsutum HOM05D001896 ORTHO05D001862 2.2e-75 285.8 170 93.5
Duzib248G0396 Durio zibethinus HOM05D001896 ORTHO05D001862 8.9e-53 210.7 169 74.6
Duzib052G0328 Durio zibethinus HOM05D001896 ORTHO05D001862 2.9e-51 205.7 168 75.0
COL.COLO4_32492 Corchorus olitorius HOM05D001896 ORTHO05D001862 8.6e-48 194.1 171 70.8
Thecc.02G119200 Theobroma cacao HOM05D001896 ORTHO05D001862 9.5e-47 190.7 169 70.4
Ciclev10030311m.g Citrus clementina HOM05D001896 ORTHO05D001862 2.9e-19 99.4 165 41.2
Duzib052G0412 Durio zibethinus HOM05D001896 ORTHO05D001862 8.4e-19 97.8 158 41.1
QL11p029532 Quercus lobata HOM05D001896 ORTHO05D001862 1.9e-18 96.7 140 44.3
Nn6g34510 Nelumbo nucifera HOM05D001896 ORTHO05D001862 2.4e-18 96.3 133 43.6
Thecc.02G119300 Theobroma cacao HOM05D001896 ORTHO05D001862 1.2e-17 94.0 166 41.0
Atru.chr5.2309 Acer truncatum HOM05D001896 ORTHO05D001862 6.6e-16 88.2 158 41.8
TAR625G0391 Trochodendron aralioides HOM05D001896 ORTHO05D001862 6.2e-14 81.6 167 33.5
Peaxi162Scf00449g00045 Petunia axillaris HOM05D001896 ORTHO05D001862 4.0e-13 79.0 134 38.8
Cpa.g.sc106.35 Carica papaya HOM05D001896 ORTHO05D001862 5.3e-13 78.6 120 41.7
COL.COLO4_32491 Corchorus olitorius HOM05D001896 ORTHO05D001862 5.3e-13 78.6 123 38.2
TAR381G1204 Trochodendron aralioides HOM05D001896 ORTHO05D001862 5.3e-13 78.6 171 32.2
Ciclev10029922m.g Citrus clementina HOM05D001896 ORTHO05D001862 9.0e-13 77.8 128 39.1
Gohir.D12G019300 Gossypium hirsutum HOM05D001896 ORTHO05D001862 9.0e-13 77.8 132 35.6
Gorai.008G019600 Gossypium raimondii HOM05D001896 ORTHO05D001862 9.0e-13 77.8 132 35.6
Nitab4.5_0003129g0070 Nicotiana tabacum HOM05D001896 ORTHO05D001862 9.0e-13 77.8 170 34.7
Ciclev10030063m.g Citrus clementina HOM05D001896 ORTHO05D001862 1.5e-12 77.0 166 33.7
Duzib147G1417 Durio zibethinus HOM05D001896 ORTHO05D001862 2.0e-12 76.6 165 32.1
Gohir.A12G018801 Gossypium hirsutum HOM05D001896 ORTHO05D001862 4.5e-12 75.5 126 37.3
Peaxi162Scf00548g00211 Petunia axillaris HOM05D001896 ORTHO05D001862 4.5e-12 75.5 149 36.2
Eucgr.I00689 Eucalyptus grandis HOM05D001896 ORTHO05D001862 1.7e-11 73.6 135 38.5
Manes.07G053000 Manihot esculenta HOM05D001896 ORTHO05D001862 2.2e-11 73.2 131 38.9
Haze_10311 Corylus avellana HOM05D001896 ORTHO05D001862 3.8e-11 72.4 131 38.2
Potri.009G086000 Populus trichocarpa HOM05D001896 ORTHO05D001862 3.8e-11 72.4 133 38.3
Manes.12G116200 Manihot esculenta HOM05D001896 ORTHO05D001862 6.4e-11 71.6 168 31.5
COL.COLO4_11600 Corchorus olitorius HOM05D001896 ORTHO05D001862 8.4e-11 71.2 134 39.6
CiPaw.05G020300 Carya illinoinensis HOM05D001896 ORTHO05D001862 1.1e-10 70.9 169 33.1
Thecc.01G074600 Theobroma cacao HOM05D001896 ORTHO05D001862 1.1e-10 70.9 166 30.7
CAN.G1075.51 Capsicum annuum HOM05D001896 ORTHO05D001862 1.4e-10 70.5 159 34.0
Gohir.A02G150400 Gossypium hirsutum HOM05D001896 ORTHO05D001862 1.4e-10 70.5 161 29.8
Duzib116G0259 Durio zibethinus HOM05D001896 ORTHO05D001862 5.4e-10 68.6 173 31.8
Eucgr.L02595 Eucalyptus grandis HOM05D001896 ORTHO05D001862 5.4e-10 68.6 135 35.6
Oeu013335.1 Olea europaea HOM05D001896 ORTHO05D001862 5.4e-10 68.6 127 35.4
Prupe.6G218500 Prunus persica HOM05D001896 ORTHO05D001862 5.4e-10 68.6 173 34.1
Dinv26948 Davidia involucrata HOM05D001896 ORTHO05D001862 7.1e-10 68.2 160 35.6
Nitab4.5_0000142g0300 Nicotiana tabacum HOM05D001896 ORTHO05D001862 7.1e-10 68.2 166 34.3
Thecc.08G086000 Theobroma cacao HOM05D001896 ORTHO05D001862 7.1e-10 68.2 167 33.5
GSVIVG01009317001 Vitis vinifera HOM05D001896 ORTHO05D001862 7.1e-10 68.2 165 30.9
CiPaw.08G051100 Carya illinoinensis HOM05D001896 ORTHO05D001862 9.3e-10 67.8 133 36.8
Eucgr.I01030 Eucalyptus grandis HOM05D001896 ORTHO05D001862 9.3e-10 67.8 131 36.6
Gohir.A01G123300 Gossypium hirsutum HOM05D001896 ORTHO05D001862 1.2e-09 67.4 131 35.1
Gorai.003G031600 Gossypium raimondii HOM05D001896 ORTHO05D001862 1.2e-09 67.4 161 29.2
Manes.10G086000 Manihot esculenta HOM05D001896 ORTHO05D001862 1.6e-09 67.0 139 37.4
Duzib093G0976 Durio zibethinus HOM05D001896 ORTHO05D001862 2.1e-09 66.6 168 33.3
FvH4_2g03520 Fragaria vesca HOM05D001896 ORTHO05D001862 2.1e-09 66.6 180 31.1
Gohir.D01G110900 Gossypium hirsutum HOM05D001896 ORTHO05D001862 2.1e-09 66.6 131 35.9
Gohir.D03G029900 Gossypium hirsutum HOM05D001896 ORTHO05D001862 2.1e-09 66.6 161 29.2
Gorai.002G135700 Gossypium raimondii HOM05D001896 ORTHO05D001862 2.1e-09 66.6 131 35.9
Prupe.8G148800 Prunus persica HOM05D001896 ORTHO05D001862 2.7e-09 66.2 150 33.3
Atru.chr3.1040 Acer truncatum HOM05D001896 ORTHO05D001862 3.5e-09 65.9 129 33.3
QL06p039341 Quercus lobata HOM05D001896 ORTHO05D001862 3.5e-09 65.9 138 34.1
FAN24G1511 Fragaria x ananassa HOM05D001896 ORTHO05D001862 4.6e-09 65.5 180 30.6
Gohir.D11G209900 Gossypium hirsutum HOM05D001896 ORTHO05D001862 4.6e-09 65.5 151 33.1
Gorai.007G225100 Gossypium raimondii HOM05D001896 ORTHO05D001862 4.6e-09 65.5 151 33.1
MD15G1299400 Malus domestica HOM05D001896 ORTHO05D001862 4.6e-09 65.5 174 33.3
Nn5g30636 Nelumbo nucifera HOM05D001896 ORTHO05D001862 4.6e-09 65.5 171 33.3
Gohir.A05G211200 Gossypium hirsutum HOM05D001896 ORTHO05D001862 6.0e-09 65.1 169 32.0
Gohir.A11G213300 Gossypium hirsutum HOM05D001896 ORTHO05D001862 1.0e-08 64.3 150 31.3
RcHm_v2.0_Chr6g0248901 Rosa chinensis HOM05D001896 ORTHO05D001862 1.0e-08 64.3 148 35.1
Gohir.D05G214500 Gossypium hirsutum HOM05D001896 ORTHO05D001862 1.3e-08 63.9 155 32.3
Duzib264G0605 Durio zibethinus HOM05D001896 ORTHO05D001862 1.8e-08 63.5 153 30.1
Gohir.D05G265500 Gossypium hirsutum HOM05D001896 ORTHO05D001862 1.8e-08 63.5 135 35.6
Gorai.009G221200 Gossypium raimondii HOM05D001896 ORTHO05D001862 2.3e-08 63.2 155 32.3
Lj7P110T16 Lonicera japonica HOM05D001896 ORTHO05D001862 2.3e-08 63.2 164 31.7
CSS0026617 Camellia sinensis var. sinensis HOM05D001896 ORTHO05D001862 3.0e-08 62.8 128 36.7
Duzib041G0206 Durio zibethinus HOM05D001896 ORTHO05D001862 3.0e-08 62.8 172 30.2
Gohir.A05G263200 Gossypium hirsutum HOM05D001896 ORTHO05D001862 3.0e-08 62.8 139 32.4
RcHm_v2.0_Chr2g0108431 Rosa chinensis HOM05D001896 ORTHO05D001862 3.0e-08 62.8 171 29.2
Manes.13G110000 Manihot esculenta HOM05D001896 ORTHO05D001862 3.9e-08 62.4 140 32.1
QL12p038359 Quercus lobata HOM05D001896 ORTHO05D001862 3.9e-08 62.4 174 31.6
Sed0003560 Sechium edule HOM05D001896 ORTHO05D001862 3.9e-08 62.4 164 30.5
Manes.10G086100 Manihot esculenta HOM05D001896 ORTHO05D001862 5.1e-08 62.0 123 39.8
Sopen02g036750 Solanum pennellii HOM05D001896 ORTHO05D001862 5.1e-08 62.0 151 31.1
CDE02G1946 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 6.7e-08 61.6 165 30.9
ClCG08G016610 Citrullus lanatus HOM05D001896 ORTHO05D001862 6.7e-08 61.6 161 30.4
Rhsim06G0063700 Rhododendron simsii HOM05D001896 ORTHO05D001862 6.7e-08 61.6 136 36.8
TAR628G1651 Trochodendron aralioides HOM05D001896 ORTHO05D001862 6.7e-08 61.6 131 33.6
CANSAT01G1870 Cannabis sativa HOM05D001896 ORTHO05D001862 8.7e-08 61.2 136 32.4
CiPaw.07G173200 Carya illinoinensis HOM05D001896 ORTHO05D001862 8.7e-08 61.2 159 29.6
Gorai.009G277300 Gossypium raimondii HOM05D001896 ORTHO05D001862 8.7e-08 61.2 137 34.3
PGR031G2497 Punica granatum HOM05D001896 ORTHO05D001862 8.7e-08 61.2 114 36.0
RcHm_v2.0_Chr6g0248931 Rosa chinensis HOM05D001896 ORTHO05D001862 8.7e-08 61.2 176 29.0
PGR083G2885 Punica granatum HOM05D001896 ORTHO05D001862 1.1e-07 60.8 174 31.0
TWI74G0977 Tripterygium wilfordii HOM05D001896 ORTHO05D001862 1.1e-07 60.8 142 32.4
Prupe.8G148600 Prunus persica HOM05D001896 ORTHO05D001862 1.5e-07 60.5 154 31.8
MELO3C010793.2 Cucumis melo HOM05D001896 ORTHO05D001862 1.9e-07 60.1 161 31.7
CsaV3_2G026000 Cucumis sativus L. HOM05D001896 ORTHO05D001862 1.9e-07 60.1 129 37.2
FAN15G3436 Fragaria x ananassa HOM05D000312 ORTHO05D000221 1.9e-07 60.1 152 33.6
Oeu053665.1 Olea europaea HOM05D001896 ORTHO05D001862 1.9e-07 60.1 133 32.3
Peaxi162Scf00548g00022 Petunia axillaris HOM05D001896 ORTHO05D001862 2.5e-07 59.7 113 36.3
Solyc02g092180.1 Solanum lycopersicum HOM05D001896 ORTHO05D001862 3.3e-07 59.3 150 32.0
Aqoxy6G02538 Aquilegia oxysepala HOM05D001896 ORTHO05D001862 4.3e-07 58.9 160 29.4
FvH4_2g03511 Fragaria vesca HOM05D001896 ORTHO05D001862 4.3e-07 58.9 152 32.9
FAN24G1421 Fragaria x ananassa HOM05D000312 ORTHO05D001862 4.3e-07 58.9 152 32.9
Dinv23033 Davidia involucrata HOM05D001896 ORTHO05D001862 5.6e-07 58.5 86 43.0
FvH4_1g17980 Fragaria vesca HOM05D001896 ORTHO05D001862 7.4e-07 58.2 174 28.7
FAN23G2360 Fragaria x ananassa HOM05D001896 ORTHO05D001862 7.4e-07 58.2 174 28.7
FAN26G2644 Fragaria x ananassa HOM05D001896 ORTHO05D001862 7.4e-07 58.2 174 28.7
Lj4P164T35 Lonicera japonica HOM05D001896 ORTHO05D001862 7.4e-07 58.2 130 33.1
FAN19G1457 Fragaria x ananassa HOM05D001896 ORTHO05D001862 9.6e-07 57.8 176 29.5
Oeu021445.1 Olea europaea HOM05D001896 ORTHO05D001862 9.6e-07 57.8 127 34.6
PGR142G1913 Punica granatum HOM05D001896 ORTHO05D001862 9.6e-07 57.8 168 29.8
MD02G1188200 Malus domestica HOM05D001896 ORTHO05D001862 1.3e-06 57.4 170 30.6
Cpa.g.sc142.51 Carica papaya HOM05D001896 ORTHO05D001862 2.8e-06 56.2 176 29.0
Oeu048568.1 Olea europaea HOM05D001896 ORTHO05D001862 2.8e-06 56.2 135 34.1
Actinidia00358 Actinidia chinensis HOM05D004083 ORTHO05D005029 3.7e-06 55.8 162 34.6
Ciclev10030194m.g Citrus clementina HOM05D001896 ORTHO05D001862 4.8e-06 55.5 169 32.0
Migut.H00334 Erythranthe guttata HOM05D001896 ORTHO05D001862 4.8e-06 55.5 125 32.8
Migut.H01320 Erythranthe guttata HOM05D001896 ORTHO05D001862 4.8e-06 55.5 136 30.1
Oeu054204.1 Olea europaea HOM05D001896 ORTHO05D001862 4.8e-06 55.5 114 36.8
Atru.chr5.2308 Acer truncatum HOM05D001896 ORTHO05D001862 8.1e-06 54.7 174 31.0


User provided reference genes

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