Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.005G206900 Gossypium raimondii HOM05D008701 ORTHO05D010238 4.6e-122 441.4 252 100.0
Gohir.D02G184600 Gossypium hirsutum HOM05D008701 ORTHO05D010238 2.6e-109 399.1 254 92.5
Gohir.A03G161300 Gossypium hirsutum HOM05D008701 ORTHO05D010238 5.3e-102 374.8 254 88.2
COL.COLO4_06754 Corchorus olitorius HOM05D008701 ORTHO05D010238 3.7e-63 245.7 278 52.5
Duzib052G1245 Durio zibethinus HOM05D008701 ORTHO05D010238 2.9e-60 236.1 291 56.7
Duzib132G0833 Durio zibethinus HOM05D008701 ORTHO05D010238 6.5e-60 235.0 285 55.4
Thecc.02G167700 Theobroma cacao HOM05D008701 ORTHO05D010238 1.9e-59 233.4 288 53.5
Gorai.002G016700 Gossypium raimondii HOM05D008701 ORTHO05D010238 1.8e-33 147.1 264 42.4
Gohir.A01G013700 Gossypium hirsutum HOM05D008701 ORTHO05D010238 1.5e-32 144.1 241 45.6
Gohir.D01G015000 Gossypium hirsutum HOM05D008701 ORTHO05D010238 1.7e-31 140.6 265 42.3
Potri.019G119000 Populus trichocarpa HOM05D008701 ORTHO05D010238 1.3e-28 131.0 279 38.0
Potri.013G149300 Populus trichocarpa HOM05D008701 ORTHO05D010238 5.6e-27 125.6 291 35.4
Sabra13G0120500 Salix brachista HOM05D008701 ORTHO05D010238 1.3e-23 114.4 274 36.1
RcHm_v2.0_Chr2g0161211 Rosa chinensis HOM05D008701 ORTHO05D010238 1.4e-22 110.9 266 33.8
Cfa014502 Carpinus fangiana HOM05D008701 ORTHO05D010238 2.4e-22 110.2 268 34.0
Prupe.3G227700 Prunus persica HOM05D008701 ORTHO05D010238 2.4e-22 110.2 276 34.1
Manes.12G085400 Manihot esculenta HOM05D008701 ORTHO05D010238 3.5e-21 106.3 280 30.0
Haze_13046 Corylus avellana HOM05D008701 ORTHO05D010238 7.8e-21 105.1 268 32.8
MD09G1098800 Malus domestica HOM05D008701 ORTHO05D010238 5.0e-20 102.4 280 33.9
FAN05G0248 Fragaria x ananassa HOM05D008701 ORTHO05D010238 1.6e-18 97.4 261 31.4
FAN02G3791 Fragaria x ananassa HOM05D008701 ORTHO05D010238 3.6e-18 96.3 250 31.2
FAN09G1417 Fragaria x ananassa HOM05D008701 ORTHO05D010238 1.4e-17 94.4 250 29.6
FvH4_6g44330 Fragaria vesca HOM05D008701 ORTHO05D010238 2.3e-17 93.6 255 30.6
FAN14G1396 Fragaria x ananassa HOM05D008701 ORTHO05D010238 2.3e-17 93.6 255 30.6
QL08p036307 Quercus lobata HOM05D008701 ORTHO05D010238 3.1e-17 93.2 252 32.5
MD17G1087000 Malus domestica HOM05D008701 ORTHO05D010238 5.2e-17 92.4 278 37.1
Dinv02575 Davidia involucrata HOM05D008701 ORTHO05D028399 1.2e-16 91.3 264 35.2
TWI36G1014 Tripterygium wilfordii HOM05D008701 ORTHO05D010238 4.9e-15 85.9 256 40.2
Atru.chr6.3092 Acer truncatum HOM05D008701 ORTHO05D010238 3.2e-14 83.2 281 38.1
Glyma.13G303300 Glycine max HOM05D014616 ORTHO05D010238 3.2e-14 83.2 215 33.5
Lj3g0023312 Lotus japonicus HOM05D014616 ORTHO05D010238 9.2e-14 81.6 208 31.2
Nn1g03826 Nelumbo nucifera HOM05D008701 ORTHO05D005382 2.7e-13 80.1 326 27.9
TAR011G0003 Trochodendron aralioides HOM05D008701 ORTHO05D010238 2.3e-12 77.0 296 30.1
arahy.Tifrunner.gnm1.ann1.77HKPR Arachis hypogaea HOM05D010583 ORTHO05D010238 5.1e-12 75.9 209 33.0
Lalb_Chr03g0029051 Lupinus albus HOM05D010583 ORTHO05D010238 5.1e-12 75.9 224 28.1
Phvul.005G110200 Phaseolus vulgaris HOM05D014616 ORTHO05D010238 5.1e-12 75.9 216 31.9
CSS0012441 Camellia sinensis var. sinensis HOM05D038632 ORTHO05D028399 1.5e-11 74.3 216 29.2
Ciclev10018089m.g Citrus clementina HOM05D008701 ORTHO05D010238 1.5e-11 74.3 88 46.6
TAR626G1447 Trochodendron aralioides HOM05D008701 ORTHO05D010238 3.3e-11 73.2 294 27.9
CiPaw.04G121600 Carya illinoinensis HOM05D008701 ORTHO05D010238 4.3e-11 72.8 234 30.8
arahy.Tifrunner.gnm1.ann1.YSN97R Arachis hypogaea HOM05D010583 ORTHO05D010238 7.3e-11 72.0 209 32.1
CiPaw.03G167300 Carya illinoinensis HOM05D008701 ORTHO05D010238 1.2e-10 71.2 193 31.6
Medtr2g089380 Medicago truncatula HOM05D014616 ORTHO05D010238 1.2e-10 71.2 204 29.4
CSS0021698 Camellia sinensis var. sinensis HOM05D038632 ORTHO05D028399 2.8e-10 70.1 209 29.2
Glyma.12G104200 Glycine max HOM05D010583 ORTHO05D010238 4.7e-10 69.3 212 31.1
Glyma.06G300500 Glycine max HOM05D010583 ORTHO05D010238 6.2e-10 68.9 212 29.7
Glyma.12G198900 Glycine max HOM05D014616 ORTHO05D010238 8.9e-09 65.1 202 31.2
TWI39G0991 Tripterygium wilfordii HOM05D013385 ORTHO05D005382 8.9e-09 65.1 292 26.7
Sabra16G0271700 Salix brachista HOM05D006433 ORTHO05D005382 2.0e-08 63.9 280 30.7
Sabra16G0276700 Salix brachista HOM05D006433 ORTHO05D005382 2.0e-08 63.9 280 30.7
TPR.G18053 Trifolium pratense HOM05D014616 ORTHO05D010238 2.0e-08 63.9 199 31.7
Lj2g0006429 Lotus japonicus HOM05D006433 ORTHO05D005382 4.4e-08 62.8 89 39.3
TPR.G39976 Trifolium pratense HOM05D006433 ORTHO05D005382 5.8e-08 62.4 73 45.2
arahy.Tifrunner.gnm1.ann1.0GGX7L Arachis hypogaea HOM05D006433 ORTHO05D005382 9.9e-08 61.6 72 43.1
Glyma.09G282600 Glycine max HOM05D006433 ORTHO05D005382 9.9e-08 61.6 71 46.5
arahy.Tifrunner.gnm1.ann1.X1AWTF Arachis hypogaea HOM05D006433 ORTHO05D005382 1.3e-07 61.2 72 44.4
TPR.G30079 Trifolium pratense HOM05D010583 ORTHO05D010238 1.7e-07 60.8 204 26.0
TWI38G1693 Tripterygium wilfordii HOM05D013385 ORTHO05D005382 2.2e-07 60.5 241 27.4
Medtr1g037520 Medicago truncatula HOM05D006433 ORTHO05D005382 2.9e-07 60.1 71 43.7
VMungo0251G3481 Vigna mungo HOM05D006433 ORTHO05D005382 4.9e-07 59.3 75 44.0
Actinidia09967 Actinidia chinensis HOM05D006433 ORTHO05D005382 6.4e-07 58.9 79 40.5
Lalb_Chr19g0135561 Lupinus albus HOM05D010583 ORTHO05D010238 6.4e-07 58.9 95 42.1
PGR083G0466 Punica granatum HOM05D012187 ORTHO05D005382 6.4e-07 58.9 262 26.7
Dinv08359 Davidia involucrata HOM05D012187 ORTHO05D005382 8.3e-07 58.5 225 27.6
DCAR_009707 Daucus carota HOM05D008701 ORTHO05D010238 1.4e-06 57.8 244 25.4
Cfa018756 Carpinus fangiana HOM05D008701 ORTHO05D010238 1.9e-06 57.4 139 34.5
Potri.001G408900 Populus trichocarpa HOM05D006433 ORTHO05D005382 1.9e-06 57.4 273 31.9
TPR.G30075 Trifolium pratense HOM05D010583 ORTHO05D010238 1.9e-06 57.4 207 24.2
Manes.03G117800 Manihot esculenta HOM05D006433 ORTHO05D020383 2.4e-06 57.0 270 24.4
VMungo1080G0398 Vigna mungo HOM05D014616 ORTHO05D010238 2.4e-06 57.0 154 31.8
Nitab4.5_0000771g0160 Nicotiana tabacum HOM05D006433 ORTHO05D005382 3.2e-06 56.6 74 35.1
Nitab4.5_0002132g0010 Nicotiana tabacum HOM05D006433 ORTHO05D005382 3.2e-06 56.6 68 38.2
Phvul.011G109200 Phaseolus vulgaris HOM05D010583 ORTHO05D010238 3.2e-06 56.6 203 29.1
Psat6g135800 Pisum sativum HOM05D006433 ORTHO05D005382 3.2e-06 56.6 74 41.9
Nitab4.5_0005356g0050 Nicotiana tabacum HOM05D006433 ORTHO05D005382 4.1e-06 56.2 74 35.1
TAR371G0604 Trochodendron aralioides HOM05D006433 ORTHO05D005382 4.1e-06 56.2 70 41.4
Aqoxy5G03711 Aquilegia oxysepala HOM05D006433 ORTHO05D005382 5.4e-06 55.8 83 42.2
DCAR_026896 Daucus carota HOM05D006433 ORTHO05D005382 5.4e-06 55.8 83 38.6
TAR624G0030 Trochodendron aralioides HOM05D008701 ORTHO05D010238 5.4e-06 55.8 80 42.5
TAR624G0398 Trochodendron aralioides HOM05D008701 ORTHO05D010238 5.4e-06 55.8 80 42.5
Solyc04g009305.1 Solanum lycopersicum HOM05D006433 ORTHO05D005382 7.1e-06 55.5 75 34.7
Sopen04g004420 Solanum pennellii HOM05D006433 ORTHO05D005382 7.1e-06 55.5 75 34.7
Lalb_Chr10g0094961 Lupinus albus HOM05D006433 ORTHO05D005382 9.2e-06 55.1 75 40.0
Rhsim06G0153900 Rhododendron simsii HOM05D038632 ORTHO05D028399 9.2e-06 55.1 264 26.1


User provided reference genes

Program Settings