Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.005G201700 Gossypium raimondii HOM05D025024 ORTHO05D004056 1.6e-65 252.7 133 100.0
Gohir.D02G180001 Gossypium hirsutum HOM05D025024 ORTHO05D004056 4.1e-61 238.0 126 98.4
Gohir.A03G156801 Gossypium hirsutum HOM05D025024 ORTHO05D004056 1.1e-45 186.8 108 90.7
Gohir.A04G103800 Gossypium hirsutum HOM05D005953 ORTHO05D004056 1.6e-12 76.6 71 63.4
Thecc.02G179300 Theobroma cacao HOM05D005953 ORTHO05D004056 4.5e-12 75.1 79 57.0
Gohir.D04G143500 Gossypium hirsutum HOM05D005953 ORTHO05D004056 1.7e-11 73.2 71 62.0
Gorai.012G128900 Gossypium raimondii HOM05D005953 ORTHO05D004056 1.7e-11 73.2 71 62.0
Atru.chr6.2998 Acer truncatum HOM05D005953 ORTHO05D004056 3.6e-09 65.5 76 51.3
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 1.0e-08 63.9 79 54.4
Manes.12G089522 Manihot esculenta HOM05D005953 ORTHO05D004056 6.8e-08 61.2 112 39.3
Medtr2g090340 Medicago truncatula HOM05D005953 ORTHO05D004056 2.6e-07 59.3 74 56.8
Ca_01501_v3 Cicer arietinum L. HOM05D005953 ORTHO05D004056 3.4e-07 58.9 74 52.7
Sopen07g028000 Solanum pennellii HOM05D005953 ORTHO05D004056 4.4e-07 58.5 74 47.3
Hma1.2p1_1201F.1_g266560 Hydrangea macrophylla HOM05D005953 ORTHO05D004056 5.8e-07 58.2 73 49.3
Solyc07g054060.3 Solanum lycopersicum HOM05D005953 ORTHO05D004056 5.8e-07 58.2 74 47.3
Glyma.12G112600 Glycine max HOM05D005953 ORTHO05D004056 7.5e-07 57.8 72 50.0
arahy.Tifrunner.gnm1.ann1.XD6XV6 Arachis hypogaea HOM05D005953 ORTHO05D004056 1.3e-06 57.0 73 52.1
QL02p049480 Quercus lobata HOM05D005953 ORTHO05D004056 1.3e-06 57.0 72 50.0
QL08p038675 Quercus lobata HOM05D005953 ORTHO05D004056 1.3e-06 57.0 72 50.0
Sp7g26250 Schrenkiella parvula HOM05D005953 ORTHO05D004056 1.3e-06 57.0 75 48.0
PGSC0003DMG400018306 Solanum tuberosum HOM05D005953 ORTHO05D004056 1.7e-06 56.6 76 50.0
HanXRQChr17g0541941 Helianthus annuus HOM05D005953 ORTHO05D004056 2.9e-06 55.8 77 45.5
Lsat_1_v5_gn_8_134201 Lactuca sativa HOM05D005953 ORTHO05D004056 2.9e-06 55.8 71 49.3
Lalb_Chr14g0366901 Lupinus albus HOM05D005953 ORTHO05D004056 2.9e-06 55.8 71 47.9
SalBow1G2785 Salvia bowleyana HOM05D005953 ORTHO05D004056 2.9e-06 55.8 72 48.6
arahy.Tifrunner.gnm1.ann1.P9B1J4 Arachis hypogaea HOM05D005953 ORTHO05D004056 3.7e-06 55.5 73 47.9
Migut.H01186 Erythranthe guttata HOM05D005953 ORTHO05D004056 3.7e-06 55.5 72 50.0
PGR042G2028 Punica granatum HOM05D005953 ORTHO05D004056 3.7e-06 55.5 115 39.1
arahy.Tifrunner.gnm1.ann1.RLZ54R Arachis hypogaea HOM05D005953 ORTHO05D004056 4.9e-06 55.1 73 47.9
MELO3C013618.2 Cucumis melo HOM05D005953 ORTHO05D004056 4.9e-06 55.1 77 45.5
SEGI_25776 Sequoiadendron giganteum HOM05D025024 ORTHO05D004056 4.9e-06 55.1 68 45.6
Manes.13G147000 Manihot esculenta HOM05D005953 ORTHO05D004056 6.4e-06 54.7 114 38.6
Psat0s741g0120 Pisum sativum HOM05D005953 ORTHO05D004056 6.4e-06 54.7 104 40.4
TAR626G0584 Trochodendron aralioides HOM05D005953 ORTHO05D004056 6.4e-06 54.7 78 42.3
ClCG07G002930 Citrullus lanatus HOM05D005953 ORTHO05D004056 8.3e-06 54.3 80 48.8
Phvul.004G108400 Phaseolus vulgaris HOM05D025024 ORTHO05D004056 8.3e-06 54.3 65 49.2
Potri.019G100601 Populus trichocarpa HOM05D005953 ORTHO05D004056 8.3e-06 54.3 69 49.3


User provided reference genes

Program Settings