Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.005G192000 Gossypium raimondii HOM05D004679 ORTHO05D005524 5.9e-175 617.5 320 100.0
Gohir.A03G147600 Gossypium hirsutum HOM05D004679 ORTHO05D005524 3.4e-170 601.7 320 97.5
Gohir.D02G170800 Gossypium hirsutum HOM05D004679 ORTHO05D005524 6.0e-143 511.1 274 98.2
Duzib268G0767 Durio zibethinus HOM05D004679 ORTHO05D005524 8.6e-134 480.7 319 79.0
Thecc.02G227400 Theobroma cacao HOM05D004679 ORTHO05D005524 4.4e-130 468.4 319 78.1
Duzib248G1266 Durio zibethinus HOM05D004679 ORTHO05D005524 2.8e-124 449.1 319 75.9
Duzib251G0437 Durio zibethinus HOM05D004679 ORTHO05D005524 6.4e-121 438.0 307 72.6
COL.COLO4_05113 Corchorus olitorius HOM05D004679 ORTHO05D005524 7.6e-114 414.5 318 68.2
Gohir.A04G097850 Gossypium hirsutum HOM05D004679 ORTHO05D005524 1.3e-108 397.1 311 65.9
Gorai.012G122000 Gossypium raimondii HOM05D004679 ORTHO05D005524 6.5e-97 358.2 312 61.9
Gohir.D04G137600 Gossypium hirsutum HOM05D004679 ORTHO05D005524 3.2e-96 355.9 312 61.2
Manes.06G066900 Manihot esculenta HOM05D004679 ORTHO05D005524 1.8e-83 313.5 330 53.0
Manes.14G103500 Manihot esculenta HOM05D004679 ORTHO05D005524 1.4e-75 287.3 325 50.8
Potri.010G123600 Populus trichocarpa HOM05D004679 ORTHO05D005524 7.0e-75 285.0 334 52.4
Sabra10G0093600 Salix brachista HOM05D004679 ORTHO05D005524 9.1e-75 284.6 334 55.1
TWI79G1695 Tripterygium wilfordii HOM05D004679 ORTHO05D005524 1.0e-73 281.2 317 54.9
Ciclev10015600m.g Citrus clementina HOM05D004679 ORTHO05D005524 1.3e-73 280.8 353 48.4
Potri.008G121700 Populus trichocarpa HOM05D004679 ORTHO05D005524 1.3e-73 280.8 334 52.7
Sabra08G0092400 Salix brachista HOM05D004679 ORTHO05D005524 3.6e-71 272.7 335 54.3
TWI31G1336 Tripterygium wilfordii HOM05D004679 ORTHO05D005524 2.4e-67 260.0 311 51.1
THA.LOC104821925 Tarenaya hassleriana HOM05D004679 ORTHO05D005524 5.7e-61 238.8 327 45.9
Dinv31629 Davidia involucrata HOM05D004679 ORTHO05D005524 1.3e-60 237.7 315 49.2
TAR371G1108 Trochodendron aralioides HOM05D004679 ORTHO05D005524 1.4e-59 234.2 320 45.3
CiPaw.15G086800 Carya illinoinensis HOM05D004679 ORTHO05D005524 5.4e-59 232.3 326 43.3
Gohir.A05G321608 Gossypium hirsutum HOM05D004679 ORTHO05D005524 2.0e-58 230.3 242 59.9
CSS0006602 Camellia sinensis var. sinensis HOM05D004679 ORTHO05D005524 2.7e-58 229.9 307 44.3
CSS0017035 Camellia sinensis var. sinensis HOM05D004679 ORTHO05D005524 2.9e-57 226.5 307 43.3
Atru.chr11.115 Acer truncatum HOM05D004679 ORTHO05D005524 3.2e-56 223.0 339 44.5
TAR629G3220 Trochodendron aralioides HOM05D004679 ORTHO05D005524 1.6e-55 220.7 319 47.0
Phvul.003G030600 Phaseolus vulgaris HOM05D004679 ORTHO05D005524 4.0e-54 216.1 336 40.5
VMungo1215G2497 Vigna mungo HOM05D004679 ORTHO05D005524 5.2e-54 215.7 326 43.3
Glyma.08G261000 Glycine max HOM05D004679 ORTHO05D005524 6.8e-54 215.3 327 43.4
Nn3g17866 Nelumbo nucifera HOM05D004679 ORTHO05D005524 6.8e-54 215.3 316 43.4
Nn4g23867 Nelumbo nucifera HOM05D004679 ORTHO05D005524 1.5e-53 214.2 327 44.6
FAN07G0705 Fragaria x ananassa HOM05D004679 ORTHO05D005524 2.6e-53 213.4 332 42.8
Prupe.1G312600 Prunus persica HOM05D004679 ORTHO05D005524 3.4e-53 213.0 334 42.8
TPR.G27958 Trifolium pratense HOM05D004679 ORTHO05D005524 3.4e-53 213.0 330 42.7
ClCG05G022630 Citrullus lanatus HOM05D004679 ORTHO05D005524 1.7e-52 210.7 331 41.4
QL01p041129 Quercus lobata HOM05D004679 ORTHO05D005524 1.7e-52 210.7 318 45.3
FvH4_4g27210 Fragaria vesca HOM05D004679 ORTHO05D005524 3.7e-52 209.5 330 43.6
CsaV3_5G034410 Cucumis sativus L. HOM05D004679 ORTHO05D005524 8.3e-52 208.4 332 39.5
FAN12G3270 Fragaria x ananassa HOM05D004679 ORTHO05D005524 1.1e-51 208.0 330 43.3
CiPaw.16G065600 Carya illinoinensis HOM05D004679 ORTHO05D005524 1.8e-51 207.2 334 40.4
Psat2g095800 Pisum sativum HOM05D004679 ORTHO05D005524 1.8e-51 207.2 325 44.0
FAN22G1304 Fragaria x ananassa HOM05D004679 ORTHO05D005524 5.4e-51 205.7 331 42.6
Cfa018585 Carpinus fangiana HOM05D004679 ORTHO05D005524 9.2e-51 204.9 321 44.5
FAN12G2517 Fragaria x ananassa HOM05D004679 ORTHO05D005524 1.2e-50 204.5 330 42.7
MELO3C012256.2 Cucumis melo HOM05D004679 ORTHO05D005524 3.5e-50 203.0 333 39.3
Nitab4.5_0003715g0040 Nicotiana tabacum HOM05D004679 ORTHO05D005524 3.5e-50 203.0 324 38.6
CSS0010437 Camellia sinensis var. sinensis HOM05D004679 ORTHO05D005524 5.9e-50 202.2 322 42.5
Hma1.2p1_0061F.1_g033750 Hydrangea macrophylla HOM05D004679 ORTHO05D005524 7.8e-50 201.8 326 44.8
Nitab4.5_0005669g0020 Nicotiana tabacum HOM05D004679 ORTHO05D005524 7.8e-50 201.8 324 39.5
RcHm_v2.0_Chr4g0435001 Rosa chinensis HOM05D004679 ORTHO05D005524 1.3e-49 201.1 331 42.3
Lj6P756T16 Lonicera japonica HOM05D004679 ORTHO05D005524 2.3e-49 200.3 318 42.1
Solyc05g009420.1 Solanum lycopersicum HOM05D004679 ORTHO05D005524 2.3e-49 200.3 320 39.7
PGR102G2503 Punica granatum HOM05D004679 ORTHO05D005524 3.8e-49 199.5 334 41.3
Sopen05g005230 Solanum pennellii HOM05D004679 ORTHO05D005524 3.8e-49 199.5 320 39.7
CSS0014673 Camellia sinensis var. sinensis HOM05D004679 ORTHO05D005524 7.3e-48 195.3 323 41.5
Haze_17496 Corylus avellana HOM05D004679 ORTHO05D005524 7.3e-48 195.3 325 43.7
Eucgr.B03012 Eucalyptus grandis HOM05D004679 ORTHO05D005524 1.2e-47 194.5 328 40.2
AT1G68440 Arabidopsis thaliana HOM05D004679 ORTHO05D005524 6.1e-47 192.2 330 40.3
BcaC08g46281 Brassica carinata HOM05D004679 ORTHO05D005524 4.0e-46 189.5 329 41.9
BcaC08g46285 Brassica carinata HOM05D004679 ORTHO05D005524 4.0e-46 189.5 329 41.9
MSTRG.848 Avicennia marina HOM05D004679 ORTHO05D005524 5.2e-46 189.1 324 38.6
C06p41510 Brassica napus HOM05D004679 ORTHO05D005524 6.8e-46 188.7 326 41.7
BolC6t39272H Brassica oleracea HOM05D004679 ORTHO05D005524 6.8e-46 188.7 326 41.7
MD13G1040500 Malus domestica HOM05D004679 ORTHO05D005524 8.9e-46 188.3 330 38.8
Cpa.g.sc1.28 Carica papaya HOM05D004679 ORTHO05D005524 4.4e-45 186.0 278 48.6
MSTRG.7662 Avicennia marina HOM05D004679 ORTHO05D005524 7.5e-45 185.3 324 37.0
Ca_07534_v3 Cicer arietinum L. HOM05D004679 ORTHO05D005524 7.5e-45 185.3 333 40.2
Glyma.01G080500 Glycine max HOM05D004679 ORTHO05D005524 7.5e-45 185.3 332 39.2
Cc11_g10010 Coffea canephora HOM05D004679 ORTHO05D005524 9.8e-45 184.9 335 37.0
Oeu003185.3 Olea europaea HOM05D004679 ORTHO05D005524 9.8e-45 184.9 320 36.9
Medtr5g056480 Medicago truncatula HOM05D004679 ORTHO05D005524 1.3e-44 184.5 338 37.6
Sp5g23510 Schrenkiella parvula HOM05D004679 ORTHO05D005524 1.3e-44 184.5 328 41.2
PGSC0003DMG400014542 Solanum tuberosum HOM05D004679 ORTHO05D005524 1.3e-44 184.5 298 39.6
MD16G1041500 Malus domestica HOM05D004679 ORTHO05D005524 2.2e-44 183.7 339 36.3
Lj2g0027656 Lotus japonicus HOM05D004679 ORTHO05D005524 3.7e-44 183.0 331 39.0
CANSAT01G1145 Cannabis sativa HOM05D004679 ORTHO05D005524 4.9e-44 182.6 328 40.5
MBI09_g16518_MAGBIO Magnolia biondii HOM05D004679 ORTHO05D005524 6.4e-44 182.2 322 37.6
AL2G27300 Arabidopsis lyrata HOM05D004679 ORTHO05D005524 1.4e-43 181.0 329 40.4
BcaB03g15806 Brassica carinata HOM05D004679 ORTHO05D005524 1.4e-43 181.0 326 38.7
A07p34850 Brassica napus HOM05D004679 ORTHO05D005524 4.1e-43 179.5 326 41.1
Migut.L01056 Erythranthe guttata HOM05D004679 ORTHO05D005524 5.4e-43 179.1 341 35.8
SGA_v2.0_scaffold38G14941 Striga asiatica HOM05D004679 ORTHO05D005524 7.0e-43 178.7 326 35.9
BcaB05g24380 Brassica carinata HOM05D004679 ORTHO05D005524 1.2e-42 177.9 330 39.4
BcaC03g14945 Brassica carinata HOM05D004679 ORTHO05D005524 2.7e-42 176.8 326 40.2
CARHR061220 Cardamine hirsuta HOM05D004679 ORTHO05D005524 2.7e-42 176.8 332 39.8
Actinidia16661 Actinidia chinensis HOM05D004679 ORTHO05D005524 3.0e-41 173.3 317 36.6
BolC2t08557H Brassica oleracea HOM05D004679 ORTHO05D005524 3.9e-41 172.9 331 39.0
A02p14990 Brassica napus HOM05D004679 ORTHO05D005524 5.0e-41 172.6 330 39.7
Lalb_Chr10g0100061 Lupinus albus HOM05D004679 ORTHO05D005524 5.0e-41 172.6 320 39.7
Rhsim09G0106900 Rhododendron simsii HOM05D004679 ORTHO05D005524 6.6e-41 172.2 306 37.6
SGA_v2.0_scaffold36G14543 Striga asiatica HOM05D004679 ORTHO05D005524 8.6e-41 171.8 323 39.6
C02p24550 Brassica napus HOM05D004679 ORTHO05D005524 1.1e-40 171.4 330 39.4
Lalb_Chr04g0254681 Lupinus albus HOM05D004679 ORTHO05D005524 7.3e-40 168.7 320 38.8
Dinv21072 Davidia involucrata HOM05D004679 ORTHO05D005524 9.5e-40 168.3 235 43.4
Aqoxy3G00274 Aquilegia oxysepala HOM05D004679 ORTHO05D005524 1.2e-39 167.9 332 38.9
Carub.0002s1495 Capsella rubella HOM05D004679 ORTHO05D005524 1.2e-39 167.9 336 39.6
Thhalv10018918m.g Eutrema salsugineum HOM05D004679 ORTHO05D005524 2.8e-39 166.8 330 39.1
AT1G25400 Arabidopsis thaliana HOM05D004679 ORTHO05D005524 6.2e-39 165.6 313 37.7
BraA02t06566Z Brassica rapa HOM05D004679 ORTHO05D005524 4.0e-38 162.9 330 39.1
Sed0013939 Sechium edule HOM05D004679 ORTHO05D005524 1.5e-37 161.0 335 34.0
SalBow8G2470 Salvia bowleyana HOM05D004679 ORTHO05D005524 2.0e-37 160.6 315 37.1
Sc14g0007400 Simmondsia chinensis HOM05D004679 ORTHO05D005524 2.0e-37 160.6 321 36.1
Oeu034235.1 Olea europaea HOM05D004679 ORTHO05D005524 3.4e-37 159.8 319 36.1
BraA07t29036Z Brassica rapa HOM05D004679 ORTHO05D005524 4.9e-36 156.0 312 38.1
A07p12580 Brassica napus HOM05D004679 ORTHO05D005524 1.4e-35 154.5 310 38.1
Nitab4.5_0005548g0020 Nicotiana tabacum HOM05D004679 ORTHO05D005524 3.2e-35 153.3 297 36.7
Nitab4.5_0000057g0200 Nicotiana tabacum HOM05D004679 ORTHO05D005524 5.4e-35 152.5 297 38.7
AL1G39920 Arabidopsis lyrata HOM05D004679 ORTHO05D005524 9.2e-35 151.8 312 37.5
arahy.Tifrunner.gnm1.ann1.ZDDP39 Arachis hypogaea HOM05D004679 ORTHO05D005524 1.6e-34 151.0 272 39.7
Sp1g22820 Schrenkiella parvula HOM05D004679 ORTHO05D005524 1.6e-34 151.0 312 39.4
BcaB03g14040 Brassica carinata HOM05D004679 ORTHO05D005524 4.6e-34 149.4 313 37.4
BcaC06g35214 Brassica carinata HOM05D004679 ORTHO05D005524 1.3e-33 147.9 315 36.8
C07p18590 Brassica napus HOM05D004679 ORTHO05D005524 1.3e-33 147.9 315 36.8
BolC7t42370H Brassica oleracea HOM05D004679 ORTHO05D005524 1.3e-33 147.9 315 36.8
ClCG08G005010 Citrullus lanatus HOM05D004679 ORTHO05D005524 5.0e-33 146.0 317 34.7
Carub.0001s2510 Capsella rubella HOM05D004679 ORTHO05D005524 3.3e-32 143.3 309 35.6
Ah.02g128020 Amaranthus hybridus HOM05D004679 ORTHO05D005524 7.3e-32 142.1 325 34.2
MELO3C011535.2 Cucumis melo HOM05D004679 ORTHO05D005524 1.6e-31 141.0 316 33.5
Sed0007978 Sechium edule HOM05D004679 ORTHO05D005524 1.6e-31 141.0 303 34.7
PGSC0003DMG400005982 Solanum tuberosum HOM05D004679 ORTHO05D005524 1.4e-30 137.9 313 35.5
Sed0011079 Sechium edule HOM05D004679 ORTHO05D005524 4.0e-30 136.3 336 32.4
Thhalv10008406m.g Eutrema salsugineum HOM05D004679 ORTHO05D005524 5.2e-30 136.0 302 37.7
CARHR026080 Cardamine hirsuta HOM05D004679 ORTHO05D005524 1.5e-29 134.4 305 34.4
CsaV3_6G003280 Cucumis sativus L. HOM05D004679 ORTHO05D005524 1.3e-28 131.3 318 32.1
CDE06G1731 Ceratophyllum demersum HOM05D004679 ORTHO05D005524 2.9e-28 130.2 301 32.6
Solyc04g007250.1 Solanum lycopersicum HOM05D004679 ORTHO05D005524 4.9e-28 129.4 311 33.1
Sopen04g002310 Solanum pennellii HOM05D004679 ORTHO05D005524 1.9e-27 127.5 310 32.6
TPR.G18826 Trifolium pratense HOM05D004679 ORTHO05D005524 2.7e-26 123.6 273 35.9
Ah.03g137540 Amaranthus hybridus HOM05D004679 ORTHO05D005524 4.6e-26 122.9 307 34.5
Ca_11162_v3 Cicer arietinum L. HOM05D004679 ORTHO05D005524 1.3e-25 121.3 313 32.9
EL10Ac6g14380 Beta vulgaris HOM05D004679 ORTHO05D005524 1.7e-25 120.9 305 34.8
Lsat_1_v5_gn_4_15920 Lactuca sativa HOM05D004679 ORTHO05D005524 4.3e-24 116.3 264 33.0
Glyma.10G273200 Glycine max HOM05D004679 ORTHO05D005524 8.1e-23 112.1 275 34.9
Psat6g226440 Pisum sativum HOM05D004679 ORTHO05D005524 1.1e-22 111.7 160 41.9
Aa31LG7G9090 Aethionema arabicum HOM05D004679 ORTHO05D005524 2.0e-21 107.5 306 32.7
Glyma.20G116700 Glycine max HOM05D004679 ORTHO05D005524 5.8e-21 105.9 275 31.6
Eucgr.G02311 Eucalyptus grandis HOM05D004679 ORTHO05D005524 1.7e-20 104.4 318 33.0
HanXRQChr16g0529431 Helianthus annuus HOM05D004679 ORTHO05D005524 2.2e-20 104.0 273 34.8
DCAR_030166 Daucus carota HOM05D004679 ORTHO05D005524 3.8e-20 103.2 284 33.8
DCAR_026738 Daucus carota HOM05D004679 ORTHO05D005524 4.1e-19 99.8 311 32.2
Eucgr.D00333 Eucalyptus grandis HOM05D004679 ORTHO05D005524 7.8e-18 95.5 184 40.8
Lalb_Chr06g0166021 Lupinus albus HOM05D004679 ORTHO05D005524 2.3e-17 94.0 315 33.0
Phvul.007G028300 Phaseolus vulgaris HOM05D004679 ORTHO05D005524 3.9e-17 93.2 263 33.5
PSO017G6556 Papaver somniferum HOM05D004679 ORTHO05D005524 8.7e-17 92.0 302 28.8
Peaxi162Scf00753g00057 Petunia axillaris HOM05D004679 ORTHO05D005524 5.6e-16 89.4 327 26.9
Medtr1g110550 Medicago truncatula HOM05D004679 ORTHO05D005524 9.6e-16 88.6 250 32.4
VMungo0720G2998 Vigna mungo HOM05D004679 ORTHO05D005524 3.6e-15 86.7 257 32.7
Lalb_Chr21g0308861 Lupinus albus HOM05D004679 ORTHO05D005524 1.8e-14 84.3 286 29.7
Lj5g0021418 Lotus japonicus HOM05D004679 ORTHO05D005524 2.7e-10 70.5 172 34.9
unitig_26.g10255 Utricularia gibba HOM05D004679 ORTHO05D005524 3.1e-06 57.0 203 26.1


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