Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.005G171500 Gossypium raimondii HOM05D006725 ORTHO05D008223 2.6e-101 372.1 190 100.0
Gohir.D02G152500 Gossypium hirsutum HOM05D006725 ORTHO05D008223 8.3e-100 367.1 190 98.4
Gohir.A03G128700 Gossypium hirsutum HOM05D006725 ORTHO05D008223 2.8e-95 352.1 190 94.7
Thecc.02G274200 Theobroma cacao HOM05D006725 ORTHO05D008223 6.1e-87 324.3 188 86.7
Duzib248G0208 Durio zibethinus HOM05D006725 ORTHO05D008223 1.0e-86 323.6 188 87.2
COL.COLO4_23620 Corchorus olitorius HOM05D006725 ORTHO05D008223 3.4e-85 318.5 188 86.7
PGR102G0799 Punica granatum HOM05D006725 ORTHO05D008223 1.1e-62 243.8 187 66.8
TWI18G0344 Tripterygium wilfordii HOM05D006725 ORTHO05D008223 5.2e-62 241.5 190 65.8
Dinv14799 Davidia involucrata HOM05D006725 ORTHO05D008223 1.2e-61 240.4 193 66.8
Potri.008G105700 Populus trichocarpa HOM05D006725 ORTHO05D008223 8.4e-60 234.2 185 67.0
RcHm_v2.0_Chr4g0431131 Rosa chinensis HOM05D006725 ORTHO05D008223 4.2e-59 231.9 187 66.3
CSS0023056 Camellia sinensis var. sinensis HOM05D006725 ORTHO05D008223 5.4e-59 231.5 187 62.6
Actinidia08088 Actinidia chinensis HOM05D006725 ORTHO05D008223 7.1e-59 231.1 192 63.0
Prupe.1G233300 Prunus persica HOM05D006725 ORTHO05D008223 7.1e-59 231.1 183 66.7
CiPaw.05G115200 Carya illinoinensis HOM05D006725 ORTHO05D008223 3.5e-58 228.8 186 65.1
THA.LOC104825521 Tarenaya hassleriana HOM05D006725 ORTHO05D008223 4.6e-58 228.4 190 64.2
TAR374G1568 Trochodendron aralioides HOM05D006725 ORTHO05D008223 4.6e-58 228.4 186 65.1
MD16G1111700 Malus domestica HOM05D006725 ORTHO05D008223 3.0e-57 225.7 183 66.1
Ca_16483_v3 Cicer arietinum L. HOM05D006725 ORTHO05D008223 5.1e-57 224.9 160 70.0
FAN12G1259 Fragaria x ananassa HOM05D006725 ORTHO05D008223 1.1e-56 223.8 201 62.2
Atru.chr11.2260 Acer truncatum HOM05D006725 ORTHO05D008223 2.5e-56 222.6 189 65.1
Atru.chr11.2245 Acer truncatum HOM05D006725 ORTHO05D008223 3.3e-56 222.2 189 65.1
FAN22G0294 Fragaria x ananassa HOM05D006725 ORTHO05D008223 3.3e-56 222.2 201 62.2
TPR.G22435 Trifolium pratense HOM05D006725 ORTHO05D008223 5.6e-56 221.5 186 62.9
Glyma.11G248100 Glycine max HOM05D006725 ORTHO05D008223 3.6e-55 218.8 160 68.8
MD13G1112100 Malus domestica HOM05D006725 ORTHO05D008223 6.2e-55 218.0 183 64.5
Rhsim12G0035000 Rhododendron simsii HOM05D006725 ORTHO05D008223 6.2e-55 218.0 228 51.8
Cfa009314 Carpinus fangiana HOM05D006725 ORTHO05D008223 8.1e-55 217.6 190 63.2
ClCG08G017310 Citrullus lanatus HOM05D006725 ORTHO05D008223 8.1e-55 217.6 160 64.4
Phvul.001G259500 Phaseolus vulgaris HOM05D006725 ORTHO05D008223 8.1e-55 217.6 186 61.8
arahy.Tifrunner.gnm1.ann1.245RAI Arachis hypogaea HOM05D006725 ORTHO05D008223 3.1e-54 215.7 189 61.4
CANSAT56G1091 Cannabis sativa HOM05D006725 ORTHO05D008223 5.3e-54 214.9 158 67.7
Ciclev10032688m.g Citrus clementina HOM05D006725 ORTHO05D008223 9.0e-54 214.2 190 61.1
QL03p054759 Quercus lobata HOM05D006725 ORTHO05D008223 1.5e-53 213.4 194 62.9
Lj3g0011418 Lotus japonicus HOM05D006725 ORTHO05D008223 2.6e-53 212.6 189 60.8
Aqoxy5G03519 Aquilegia oxysepala HOM05D006725 ORTHO05D008223 4.4e-53 211.8 185 63.2
vmacro01086 Vaccinium macrocarpon HOM05D006725 ORTHO05D008223 5.8e-53 211.5 177 58.8
Medtr3g085720 Medicago truncatula HOM05D006725 ORTHO05D008223 1.3e-52 210.3 186 60.2
Nn4g22406 Nelumbo nucifera HOM05D006725 ORTHO05D008223 4.9e-52 208.4 161 64.6
Haze_12368 Corylus avellana HOM05D006725 ORTHO05D008223 8.4e-52 207.6 221 54.8
Sed0015494 Sechium edule HOM05D006725 ORTHO05D008223 8.4e-52 207.6 174 59.8
Lsat_1_v5_gn_4_2821 Lactuca sativa HOM05D006725 ORTHO05D008223 4.2e-51 205.3 196 58.7
Sopen05g009780 Solanum pennellii HOM05D006725 ORTHO05D008223 9.3e-51 204.1 195 58.5
HanXRQChr17g0569291 Helianthus annuus HOM05D006725 ORTHO05D008223 1.6e-50 203.4 194 57.7
Glyma.18G009100 Glycine max HOM05D006725 ORTHO05D008223 2.1e-50 203.0 143 71.3
Manes.13G015700 Manihot esculenta HOM05D006725 ORTHO05D008223 2.7e-50 202.6 142 70.4
PSO063G2169 Papaver somniferum HOM05D006725 ORTHO05D008223 4.6e-50 201.8 192 58.3
PSO782G3390 Papaver somniferum HOM05D006725 ORTHO05D008223 4.6e-50 201.8 185 59.5
Solyc05g014650.2 Solanum lycopersicum HOM05D006725 ORTHO05D008223 6.0e-50 201.4 195 56.9
Peaxi162Scf00128g00835 Petunia axillaris HOM05D006725 ORTHO05D008223 1.0e-49 200.7 201 56.2
Psat5g094640 Pisum sativum HOM05D006725 ORTHO05D008223 3.0e-49 199.1 166 60.8
Lalb_Chr11g0075681 Lupinus albus HOM05D006725 ORTHO05D008223 1.9e-48 196.4 188 58.5
arahy.Tifrunner.gnm1.ann1.ZVR9LL Arachis hypogaea HOM05D006725 ORTHO05D008223 2.5e-48 196.1 167 61.7
Aqoxy5G03514 Aquilegia oxysepala HOM05D006725 ORTHO05D008223 3.3e-48 195.7 170 63.5
Thhalv10019173m.g Eutrema salsugineum HOM05D006725 ORTHO05D008223 3.3e-48 195.7 197 56.9
Migut.K00702 Erythranthe guttata HOM05D006725 ORTHO05D008223 9.6e-48 194.1 195 53.3
CsaV3_2G025320 Cucumis sativus L. HOM05D006725 ORTHO05D008223 1.3e-47 193.7 178 55.1
SalBow2G1482 Salvia bowleyana HOM05D006725 ORTHO05D008223 3.6e-47 192.2 210 53.3
Hund06064 Selenicereus undatus HOM05D006725 ORTHO05D008223 1.1e-46 190.7 189 55.6
Lj3A1064T102 Lonicera japonica HOM05D006725 ORTHO05D008223 2.4e-46 189.5 186 55.4
HPP92_021374 Vanilla planifolia HOM05D006725 ORTHO05D008223 2.4e-46 189.5 169 58.0
Sabra08G0079700 Salix brachista HOM05D006725 ORTHO05D008223 5.3e-46 188.3 192 55.7
unitig_749.g13304 Utricularia gibba HOM05D006725 ORTHO05D008223 5.3e-46 188.3 199 53.8
AL2G26280 Arabidopsis lyrata HOM05D006725 ORTHO05D008223 9.0e-46 187.6 177 58.2
SGA_v2.0_scaffold46G17392 Striga asiatica HOM05D006725 ORTHO05D008223 1.2e-45 187.2 203 51.7
BolC6t39176H Brassica oleracea HOM05D006725 ORTHO05D008223 2.0e-45 186.4 199 56.3
BraA07t31040Z Brassica rapa HOM05D006725 ORTHO05D008223 2.0e-45 186.4 199 55.8
AT1G67620 Arabidopsis thaliana HOM05D006725 ORTHO05D008223 3.4e-45 185.7 195 55.4
BcaB03g15182 Brassica carinata HOM05D006725 ORTHO05D008223 5.8e-45 184.9 199 56.3
A07p34140 Brassica napus HOM05D006725 ORTHO05D008223 5.8e-45 184.9 201 54.7
ATR0609G130 Amborella trichopoda HOM05D006725 ORTHO05D008223 7.6e-45 184.5 180 54.4
EL10Ac6g13437 Beta vulgaris HOM05D006725 ORTHO05D008223 2.2e-44 183.0 187 54.5
BcaC08g46171 Brassica carinata HOM05D006725 ORTHO05D008223 2.2e-44 183.0 199 55.8
C06p42630 Brassica napus HOM05D006725 ORTHO05D008223 2.2e-44 183.0 199 55.8
Carub.0002s1395 Capsella rubella HOM05D006725 ORTHO05D008223 3.8e-44 182.2 179 55.9
CARHR060190 Cardamine hirsuta HOM05D006725 ORTHO05D008223 4.9e-44 181.8 165 58.8
AUR62005570 Chenopodium quinoa HOM05D006725 ORTHO05D008223 2.4e-43 179.5 223 48.9
Nitab4.5_0000581g0080 Nicotiana tabacum HOM05D006725 ORTHO05D008223 4.2e-43 178.7 193 52.3
BraA07t31044Z Brassica rapa HOM05D006725 ORTHO05D008223 7.1e-43 177.9 198 51.0
Eucgr.B03461 Eucalyptus grandis HOM05D006725 ORTHO05D008223 7.1e-43 177.9 206 48.1
Aa31LG4G12010 Aethionema arabicum HOM05D006725 ORTHO05D008223 4.3e-40 168.7 177 51.4
Zm00001eb133570 Zea mays HOM05D006725 ORTHO05D008223 9.6e-40 167.5 157 53.5
DCAR_007015 Daucus carota HOM05D006725 ORTHO05D008223 2.8e-39 166.0 140 60.7
Os12g0241100 Oryza sativa ssp. japonica HOM05D006725 ORTHO05D008223 6.2e-39 164.9 167 52.7
GSVIVG01010346001 Vitis vinifera HOM05D006725 ORTHO05D008223 2.0e-37 159.8 109 72.5
CDE09G0294 Ceratophyllum demersum HOM05D006725 ORTHO05D008223 2.7e-34 149.4 105 71.4
MELO3C010728.2 Cucumis melo HOM05D006725 ORTHO05D008223 2.3e-33 146.4 129 59.7
Sc04g0004650 Simmondsia chinensis HOM05D006725 ORTHO05D008223 3.0e-33 146.0 166 47.0
ECA234G0356 Erigeron canadensis HOM05D006725 ORTHO05D008223 3.2e-27 125.9 109 62.4
arahy.Tifrunner.gnm1.ann1.GPZA99 Arachis hypogaea HOM05D006725 ORTHO05D008223 1.2e-26 124.0 142 52.1
Cc11_g16590 Coffea canephora HOM05D006725 ORTHO05D008223 6.1e-26 121.7 85 68.2
VMungo1383G0611 Vigna mungo HOM05D006725 ORTHO05D008223 3.9e-25 119.0 193 44.6
AUR62024160 Chenopodium quinoa HOM05D006725 ORTHO05D008223 9.7e-24 114.4 143 45.5
SalBow3G4645 Salvia bowleyana HOM05D006725 ORTHO05D008223 1.6e-23 113.6 82 68.3
Cpa.g.sc351.2 Carica papaya HOM05D006725 ORTHO05D008223 8.2e-23 111.3 172 42.4
FvH4_4g24330 Fragaria vesca HOM05D006725 ORTHO05D008223 1.4e-22 110.5 104 59.6
Nitab4.5_0000240g0060 Nicotiana tabacum HOM05D006725 ORTHO05D008223 9.0e-22 107.8 83 62.7
RcHm_v2.0_Chr7g0198741 Rosa chinensis HOM05D006725 ORTHO05D008223 2.0e-21 106.7 76 65.8
CAN.G1081.11 Capsicum annuum HOM05D006725 ORTHO05D008223 4.5e-21 105.5 105 55.2
CAN.G3094.2 Capsicum annuum HOM05D006725 ORTHO05D008223 4.5e-21 105.5 105 55.2
Atru.chr7.1050 Acer truncatum HOM05D006725 ORTHO05D008223 7.7e-21 104.8 68 72.1
RcHm_v2.0_Chr1g0343341 Rosa chinensis HOM05D006725 ORTHO05D008223 7.7e-21 104.8 72 70.8
CDE02G2623 Ceratophyllum demersum HOM05D006725 ORTHO05D008223 2.2e-20 103.2 108 57.4
Pp3c8_14070 Physcomitrium patens HOM05D006725 ORTHO05D008223 5.0e-20 102.1 106 41.5
SalBow1G8122 Salvia bowleyana HOM05D004872 ORTHO05D006050 5.0e-20 102.1 71 67.6
Oeu041686.1 Olea europaea HOM05D006725 ORTHO05D008223 3.2e-19 99.4 108 54.6
Actinidia30676 Actinidia chinensis HOM05D006725 ORTHO05D008223 9.4e-19 97.8 100 51.0
SMO141G0262 Selaginella moellendorffii HOM05D006725 ORTHO05D008223 1.4e-17 94.0 105 38.1
MBI08_g41741_MAGBIO Magnolia biondii HOM05D006725 ORTHO05D008223 1.8e-17 93.6 66 65.2
CAN.G1081.12 Capsicum annuum HOM05D006725 ORTHO05D008223 2.3e-17 93.2 86 50.0
CAN.G3094.1 Capsicum annuum HOM05D006725 ORTHO05D008223 2.3e-17 93.2 86 50.0
CBR_g17596 Chara braunii HOM05D006725 ORTHO05D008223 3.9e-17 92.4 106 38.7
MBI08_g41742_MAGBIO Magnolia biondii HOM05D006725 ORTHO05D008223 2.2e-15 86.7 68 61.8
Hma1.2p1_0167F.1_g073800 Hydrangea macrophylla HOM05D006725 ORTHO05D008223 9.1e-14 81.3 51 70.6
MCO03G004 Micromonas commoda HOM05D006725 ORTHO05D008223 3.8e-12 75.9 116 30.2
RcHm_v2.0_Chr1g0366581 Rosa chinensis HOM05D006725 ORTHO05D008223 2.5e-11 73.2 52 69.2
RcHm_v2.0_Chr3g0456071 Rosa chinensis HOM05D006725 ORTHO05D008223 4.2e-11 72.4 51 68.6
RcHm_v2.0_Chr7g0183971 Rosa chinensis HOM05D006725 ORTHO05D008223 5.5e-11 72.0 52 67.3
SpUn0282_0010 Schrenkiella parvula HOM05D006725 ORTHO05D008223 9.7e-08 61.2 56 58.9


User provided reference genes

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