Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.005G164500 Gossypium raimondii HOM05D005577 ORTHO05D006941 6.7e-265 916.8 453 100.0
Gohir.D02G146900 Gossypium hirsutum HOM05D005577 ORTHO05D006941 1.3e-263 912.5 453 99.6
Gohir.A03G117000 Gossypium hirsutum HOM05D005577 ORTHO05D006941 1.2e-258 896.0 453 97.4
Duzib248G1391 Durio zibethinus HOM05D005577 ORTHO05D006941 5.7e-240 833.9 453 89.8
Thecc.02G202700 Theobroma cacao HOM05D005577 ORTHO05D006941 4.2e-235 817.8 452 87.8
GSVIVG01029087001 Vitis vinifera HOM05D005577 ORTHO05D006941 2.2e-223 778.9 447 84.1
COL.COLO4_20442 Corchorus olitorius HOM05D005577 ORTHO05D006941 3.7e-223 778.1 453 84.3
TWI36G1278 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 1.9e-219 765.8 448 82.8
TAR629G1549 Trochodendron aralioides HOM05D005577 ORTHO05D006941 9.5e-219 763.5 453 82.6
Peaxi162Scf00128g01539 Petunia axillaris HOM05D005577 ORTHO05D006941 3.0e-217 758.4 450 81.8
TWI75G1135 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 5.2e-217 757.7 448 83.5
Cfa009383 Carpinus fangiana HOM05D005577 ORTHO05D006941 1.5e-216 756.1 447 82.3
Haze_12444 Corylus avellana HOM05D005577 ORTHO05D006941 2.0e-216 755.7 478 78.2
Manes.12G008900 Manihot esculenta HOM05D005577 ORTHO05D006941 2.8e-215 751.9 450 81.3
Hund25478 Selenicereus undatus HOM05D005577 ORTHO05D006941 6.3e-215 750.7 448 80.4
CSS0033060 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 1.1e-214 750.0 452 81.4
CSS0039862 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 1.1e-214 750.0 454 80.4
Nitab4.5_0008235g0010 Nicotiana tabacum HOM05D005577 ORTHO05D006941 1.1e-214 750.0 448 81.2
Nitab4.5_0001010g0020 Nicotiana tabacum HOM05D005577 ORTHO05D006941 1.8e-214 749.2 446 81.4
Ciclev10031511m.g Citrus clementina HOM05D005577 ORTHO05D006941 5.4e-214 747.7 448 81.0
Manes.13G009300 Manihot esculenta HOM05D005577 ORTHO05D006941 1.2e-213 746.5 450 80.4
Sc11g0000360 Simmondsia chinensis HOM05D005577 ORTHO05D006941 2.0e-213 745.7 451 81.4
Nn3g16413 Nelumbo nucifera HOM05D005577 ORTHO05D006941 1.3e-212 743.0 453 80.1
CiPaw.06G104800 Carya illinoinensis HOM05D005577 ORTHO05D006941 1.7e-212 742.7 447 80.5
Rhsim12G0094300 Rhododendron simsii HOM05D005577 ORTHO05D006941 1.7e-212 742.7 448 79.9
Sopen04g017360 Solanum pennellii HOM05D005577 ORTHO05D006941 6.6e-212 740.7 450 79.1
Sed0021319 Sechium edule HOM05D005577 ORTHO05D006941 8.6e-212 740.3 453 77.7
CsaV3_6G008170 Cucumis sativus L. HOM05D005577 ORTHO05D006941 1.1e-211 740.0 453 77.9
Eucgr.H04616 Eucalyptus grandis HOM05D005577 ORTHO05D006941 1.1e-211 740.0 431 81.9
MSTRG.487 Avicennia marina HOM05D005577 ORTHO05D006941 1.5e-211 739.6 452 79.2
Potri.003G169300 Populus trichocarpa HOM05D005577 ORTHO05D006941 3.3e-211 738.4 451 81.2
EL10Ac6g13532 Beta vulgaris HOM05D005577 ORTHO05D006941 1.2e-210 736.5 448 79.2
QL03p051875 Quercus lobata HOM05D005577 ORTHO05D006941 1.0e-209 733.4 461 78.5
Dinv11687 Davidia involucrata HOM05D005577 ORTHO05D006941 1.4e-209 733.0 416 85.1
Glyma.05G148900 Glycine max HOM05D005577 ORTHO05D006941 2.3e-209 732.3 458 77.7
Lj6A829T30 Lonicera japonica HOM05D005577 ORTHO05D006941 6.8e-209 730.7 476 77.3
CANSAT01G0699 Cannabis sativa HOM05D005577 ORTHO05D006941 2.6e-208 728.8 453 79.5
Migut.K00987 Erythranthe guttata HOM05D005577 ORTHO05D006941 2.6e-208 728.8 452 77.7
Medtr8g097160 Medicago truncatula HOM05D005577 ORTHO05D006941 2.6e-208 728.8 457 78.6
Ca_18016_v3 Cicer arietinum L. HOM05D005577 ORTHO05D006941 1.3e-207 726.5 456 78.3
Cc11_g17150 Coffea canephora HOM05D005577 ORTHO05D006941 1.7e-207 726.1 450 78.0
DCAR_024669 Daucus carota HOM05D005577 ORTHO05D006941 6.4e-207 724.2 484 74.2
FAN07G0551 Fragaria x ananassa HOM05D005577 ORTHO05D006941 6.4e-207 724.2 436 80.3
Phvul.L003546 Phaseolus vulgaris HOM05D005577 ORTHO05D006941 6.4e-207 724.2 455 77.1
Glyma.08G105600 Glycine max HOM05D005577 ORTHO05D006941 1.1e-206 723.4 458 76.9
RcHm_v2.0_Chr4g0418271 Rosa chinensis HOM05D005577 ORTHO05D006941 1.4e-206 723.0 436 80.3
MD13G1121900 Malus domestica HOM05D005577 ORTHO05D006941 1.8e-206 722.6 454 78.4
FAN22G0128 Fragaria x ananassa HOM05D005577 ORTHO05D006941 3.2e-206 721.8 436 80.0
TPR.G26572 Trifolium pratense HOM05D005577 ORTHO05D006941 7.0e-206 720.7 457 77.5
FAN12G2046 Fragaria x ananassa HOM05D005577 ORTHO05D006941 9.2e-206 720.3 432 79.9
Lalb_Chr07g0187001 Lupinus albus HOM05D005577 ORTHO05D006941 2.0e-205 719.2 450 77.3
SalBow2G2693 Salvia bowleyana HOM05D005577 ORTHO05D006941 1.0e-204 716.8 449 77.7
arahy.Tifrunner.gnm1.ann1.V9CB21 Arachis hypogaea HOM05D005577 ORTHO05D006941 1.3e-204 716.5 458 76.6
Aqoxy5G03309 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 5.0e-204 714.5 455 76.0
BcaB03g15345 Brassica carinata HOM05D005577 ORTHO05D006941 6.6e-204 714.1 448 75.4
arahy.Tifrunner.gnm1.ann1.HTD3J8 Arachis hypogaea HOM05D005577 ORTHO05D006941 1.1e-203 713.4 456 76.5
Lj4g0002319 Lotus japonicus HOM05D005577 ORTHO05D006941 2.5e-203 712.2 459 76.5
Thhalv10018528m.g Eutrema salsugineum HOM05D005577 ORTHO05D006941 1.2e-202 709.9 447 74.7
Solyc04g045530.4 Solanum lycopersicum HOM05D005577 ORTHO05D006941 6.2e-202 707.6 430 79.8
ATR0561G025 Amborella trichopoda HOM05D005577 ORTHO05D006941 3.1e-201 705.3 448 74.3
Os07g0406800 Oryza sativa ssp. japonica HOM05D005577 ORTHO05D006941 3.1e-201 705.3 458 73.6
Sp5g22260 Schrenkiella parvula HOM05D005577 ORTHO05D006941 3.1e-201 705.3 448 74.3
Oeu058914.1 Olea europaea HOM05D005577 ORTHO05D006941 1.5e-200 703.0 469 73.1
THA.LOC104807138 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 1.7e-199 699.5 447 75.6
BraA07t30887Z Brassica rapa HOM05D005577 ORTHO05D006941 2.2e-199 699.1 467 71.7
ECA233G0246 Erigeron canadensis HOM05D005577 ORTHO05D006941 3.7e-199 698.4 448 75.0
Hma1.2p1_0065F.1_g035160 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 3.7e-199 698.4 448 77.0
HanXRQChr12g0354651 Helianthus annuus HOM05D005577 ORTHO05D006941 6.4e-199 697.6 453 75.5
Ah.03g135990 Amaranthus hybridus HOM05D005577 ORTHO05D006941 8.3e-199 697.2 448 76.6
A02p14150 Brassica napus HOM05D005577 ORTHO05D006941 1.9e-198 696.0 448 74.1
C02p22860 Brassica napus HOM05D005577 ORTHO05D006941 5.4e-198 694.5 448 73.7
Carub.0002s1360 Capsella rubella HOM05D005577 ORTHO05D006941 7.0e-198 694.1 448 73.4
HanXRQChr12g0357271 Helianthus annuus HOM05D005577 ORTHO05D006941 9.2e-198 693.7 453 75.7
A07p32630 Brassica napus HOM05D005577 ORTHO05D006941 3.5e-197 691.8 459 72.5
HPP92_020263 Vanilla planifolia HOM05D005577 ORTHO05D006941 6.0e-197 691.0 448 73.2
AL2G25840 Arabidopsis lyrata HOM05D005577 ORTHO05D006941 3.9e-196 688.3 448 73.7
Lsat_1_v5_gn_2_63520 Lactuca sativa HOM05D005577 ORTHO05D006941 3.9e-196 688.3 448 74.8
CARHR059800 Cardamine hirsuta HOM05D005577 ORTHO05D006941 8.6e-196 687.2 448 73.7
Zm00001eb421110 Zea mays HOM05D005577 ORTHO05D006941 1.1e-195 686.8 450 72.2
PSO017G5787 Papaver somniferum HOM05D005577 ORTHO05D006941 1.5e-195 686.4 447 73.8
Prupe.1G223400 Prunus persica HOM05D005577 ORTHO05D006941 3.3e-195 685.3 453 75.9
BolC2t08435H Brassica oleracea HOM05D005577 ORTHO05D006941 7.3e-195 684.1 468 70.7
AT1G67320 Arabidopsis thaliana HOM05D005577 ORTHO05D006941 9.5e-195 683.7 448 73.4
THA.LOC104825491 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 1.6e-194 682.9 447 74.0
BraA02t06478Z Brassica rapa HOM05D005577 ORTHO05D006941 2.8e-194 682.2 477 69.6
ClCG06G002100 Citrullus lanatus HOM05D005577 ORTHO05D006941 8.3e-191 670.6 447 73.6
CDE05G3041 Ceratophyllum demersum HOM05D005577 ORTHO05D006941 2.4e-190 669.1 457 70.5
Sabra03G0124100 Salix brachista HOM05D005577 ORTHO05D006941 2.4e-190 669.1 481 71.7
vmacro17973 Vaccinium macrocarpon HOM05D005577 ORTHO05D006941 1.2e-189 666.8 498 69.7
CAN.G97.33 Capsicum annuum HOM05D005577 ORTHO05D006941 1.6e-189 666.4 453 73.5
MELO3C022319.2 Cucumis melo HOM05D005577 ORTHO05D006941 3.9e-188 661.8 412 77.4
SGA_v2.0_scaffold114G31915 Striga asiatica HOM05D005577 ORTHO05D006941 9.5e-187 657.1 463 71.7
SEGI_29210 Sequoiadendron giganteum HOM05D005577 ORTHO05D006941 2.0e-184 649.4 429 71.3
unitig_699.g19962 Utricularia gibba HOM05D005577 ORTHO05D006941 4.4e-184 648.3 484 65.9
Actinidia09628 Actinidia chinensis HOM05D005577 ORTHO05D006941 2.9e-183 645.6 405 78.3
QL02p017501 Quercus lobata HOM05D005577 ORTHO05D006941 2.3e-180 636.0 409 76.3
Cpa.g.sc43.82 Carica papaya HOM05D005577 ORTHO05D006941 1.9e-179 632.9 451 71.2
BcaC03g14832 Brassica carinata HOM05D005577 ORTHO05D006941 1.6e-178 629.8 412 73.3
Zm00001eb407100 Zea mays HOM05D005577 ORTHO05D006941 5.8e-176 621.3 386 75.6
Aa31LG2G15630 Aethionema arabicum HOM05D005577 ORTHO05D006941 3.9e-172 608.6 457 65.9
FvH4_4g14550 Fragaria vesca HOM05D005577 ORTHO05D006941 2.5e-171 605.9 363 80.7
AUR62028904 Chenopodium quinoa HOM05D005577 ORTHO05D006941 5.6e-171 604.7 464 65.7
AUR62005646 Chenopodium quinoa HOM05D005577 ORTHO05D006941 1.4e-169 600.1 448 66.3
Mapoly0051s0085 Marchantia polymorpha HOM05D005577 ORTHO05D006941 4.0e-161 572.0 430 63.5
AagrBONN_evm.TU.Sc2ySwM_362.1325 Anthoceros agrestis HOM05D005577 ORTHO05D006941 8.7e-156 554.3 446 60.5
Hma1.2p1_0065F.1_g035170 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 1.8e-153 546.6 322 80.7
CBR_g45479 Chara braunii HOM05D005577 ORTHO05D006941 5.3e-153 545.0 430 60.0
Pp3c17_16180 Physcomitrium patens HOM05D005577 ORTHO05D006941 2.2e-151 539.7 436 58.7
SMO340G0130 Selaginella moellendorffii HOM05D005577 ORTHO05D006941 7.9e-149 531.2 426 60.3
BcaB05g24262 Brassica carinata HOM05D005577 ORTHO05D006941 5.3e-137 491.9 454 59.5
Psat7g076760 Pisum sativum HOM05D005577 ORTHO05D006941 3.0e-132 476.1 276 80.8
TAR371G1028 Trochodendron aralioides HOM05D005577 ORTHO05D006941 2.0e-123 446.8 447 56.8
MCO02G430 Micromonas commoda HOM05D005577 ORTHO05D006941 1.0e-116 424.5 439 46.9
PRCOL_00003669 Prasinoderma coloniale HOM05D005577 ORTHO05D006941 6.1e-109 398.7 424 49.1
MD09G1083700 Malus domestica HOM05D005577 ORTHO05D006941 3.0e-100 369.8 315 61.9
QL03p057485 Quercus lobata HOM05D005577 ORTHO05D006941 4.9e-98 362.5 367 55.9
Cre06.g293000 Chlamydomonas reinhardtii HOM05D005577 ORTHO05D006941 8.9e-92 341.7 490 39.4
Aqoxy7G01339 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 1.1e-86 324.7 182 84.1
Psat7g076800 Pisum sativum HOM05D005577 ORTHO05D006941 6.0e-64 249.2 188 70.2
MD16G1122200 Malus domestica HOM05D005577 ORTHO05D006941 2.6e-59 233.8 361 41.6
RcHm_v2.0_Chr4g0417261 Rosa chinensis HOM05D005577 ORTHO05D006941 1.3e-55 221.5 375 39.5
Atru.chr11.2352 Acer truncatum HOM05D005577 ORTHO05D006941 4.3e-54 216.5 108 88.9
Atru.chr11.2353 Acer truncatum HOM05D005577 ORTHO05D006941 1.5e-46 191.4 124 79.0
Atru.chr11.2354 Acer truncatum HOM05D005577 ORTHO05D006941 6.9e-44 182.6 124 75.8
Dinv17584 Davidia involucrata HOM05D005577 ORTHO05D006941 9.0e-44 182.2 390 33.8
RcHm_v2.0_Chr4g0417231 Rosa chinensis HOM05D005577 ORTHO05D006941 5.6e-38 162.9 137 62.0
SHI17983 Sapria himalayana HOM05D005577 ORTHO05D006941 6.1e-32 142.9 101 68.3
SHI17980 Sapria himalayana HOM05D005577 ORTHO05D006941 1.3e-31 141.7 85 69.4
Lsat_1_v5_gn_0_16180 Lactuca sativa HOM05D005577 ORTHO05D006941 1.7e-26 124.8 127 50.4
Duzib268G0110 Durio zibethinus HOM05D005577 ORTHO05D006941 4.6e-24 116.7 101 60.4
Potri.017G053801 Populus trichocarpa HOM05D005577 ORTHO05D006941 1.5e-22 111.7 83 65.1
A10p10750 Brassica napus HOM05D005577 ORTHO05D006941 2.5e-22 110.9 67 71.6
MD16G1122100 Malus domestica HOM05D005577 ORTHO05D006941 1.7e-21 108.2 76 68.4
QL10p065845 Quercus lobata HOM05D000176 ORTHO05D000106 2.4e-20 104.4 104 57.7
MCO16G135 Micromonas commoda HOM05D005577 ORTHO05D267611 3.4e-19 100.5 192 31.2
RcHm_v2.0_Chr4g0417241 Rosa chinensis HOM05D005577 ORTHO05D006941 5.9e-19 99.8 67 70.1
SHI17982 Sapria himalayana HOM05D005577 ORTHO05D006941 1.7e-18 98.2 70 67.1
SHI17981 Sapria himalayana HOM05D005577 ORTHO05D006941 6.1e-16 89.7 58 77.6


User provided reference genes

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