Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 1.4e-193 679.5 351 100.0
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 1.1e-190 669.8 351 98.6
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 1.1e-187 659.8 352 97.2
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 1.0e-151 540.4 349 82.2
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 2.1e-149 532.7 349 81.1
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 1.1e-110 404.1 359 61.8
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 3.6e-109 399.1 343 62.4
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 1.1e-108 397.5 271 76.8
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 2.4e-108 396.4 338 61.8
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 6.8e-108 394.8 333 64.0
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 1.2e-107 394.0 327 63.3
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 1.5e-107 393.7 342 63.5
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 1.7e-106 390.2 352 61.9
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 1.9e-105 386.7 353 61.5
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 4.3e-102 375.6 324 61.4
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 2.1e-101 373.2 350 60.6
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 1.1e-100 370.9 343 60.3
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 4.0e-100 369.0 336 61.9
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 1.3e-98 364.0 334 61.4
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 1.7e-98 363.6 339 58.1
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 1.1e-97 360.9 375 56.0
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 4.2e-97 359.0 346 59.5
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 7.1e-97 358.2 327 59.3
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 5.1e-95 352.1 317 59.0
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 5.1e-95 352.1 331 59.2
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 1.9e-94 350.1 337 56.1
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 7.3e-94 348.2 347 58.8
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 3.6e-93 345.9 351 55.0
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 8.1e-93 344.7 348 53.2
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 1.8e-92 343.6 337 57.0
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 3.1e-92 342.8 327 57.8
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 4.0e-92 342.4 335 56.7
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 6.9e-92 341.7 351 56.4
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 1.2e-91 340.9 341 56.6
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 2.2e-90 336.7 334 54.5
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 4.9e-90 335.5 334 53.6
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 8.4e-90 334.7 333 55.3
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 8.4e-90 334.7 348 54.9
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 8.4e-90 334.7 337 57.6
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 1.1e-89 334.3 338 57.4
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 1.9e-89 333.6 328 58.5
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 2.4e-89 333.2 333 57.7
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 2.4e-89 333.2 343 57.1
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 7.1e-89 331.6 340 55.6
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 1.2e-88 330.9 333 55.0
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 1.2e-88 330.9 333 55.0
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 2.1e-88 330.1 337 54.0
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 2.1e-88 330.1 333 55.6
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 2.1e-88 330.1 350 52.3
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 2.7e-88 329.7 438 47.5
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 4.6e-88 328.9 344 55.5
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 1.0e-87 327.8 351 54.4
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 1.8e-87 327.0 336 56.2
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 3.0e-87 326.2 340 52.9
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 3.9e-87 325.9 332 55.1
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 6.7e-87 325.1 352 52.0
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 6.7e-87 325.1 344 53.5
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 1.1e-86 324.3 339 54.0
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 1.5e-86 323.9 349 54.2
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 4.3e-86 322.4 343 52.5
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 5.6e-86 322.0 331 55.3
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 7.4e-86 321.6 334 55.1
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 1.3e-85 320.9 331 55.0
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 2.8e-85 319.7 349 54.7
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 2.8e-85 319.7 326 54.6
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 2.8e-85 319.7 329 52.9
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 6.2e-85 318.5 332 55.1
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 1.8e-84 317.0 346 52.0
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 3.1e-84 316.2 323 52.3
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 6.9e-84 315.1 325 52.3
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.2e-83 314.3 331 54.7
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 2.6e-83 313.2 350 54.0
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 4.5e-83 312.4 337 55.5
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 1.3e-82 310.8 349 52.1
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 1.3e-82 310.8 327 52.9
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 1.4e-81 307.4 344 51.2
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 3.2e-81 306.2 331 49.8
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 3.2e-81 306.2 330 50.3
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 6.0e-80 302.0 348 48.6
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 3.9e-79 299.3 320 55.0
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 8.7e-79 298.1 336 51.5
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 8.7e-79 298.1 347 50.1
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 4.3e-78 295.8 349 48.4
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 7.4e-78 295.0 252 63.9
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 2.0e-75 287.0 330 51.2
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 6.5e-74 282.0 341 49.0
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 6.5e-74 282.0 328 51.8
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 1.9e-73 280.4 346 47.7
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 2.7e-72 276.6 386 45.6
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 2.2e-69 266.9 288 52.1
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 6.5e-66 255.4 321 47.7
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 6.7e-63 245.4 441 38.8
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 2.0e-62 243.8 251 55.0
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 2.8e-61 240.0 381 39.4
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 2.0e-54 217.2 235 52.3
Haze_10736 Corylus avellana HOM05D006361 ORTHO05D007824 7.7e-51 205.3 180 60.6
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 3.0e-47 193.4 373 33.5
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 6.3e-45 185.7 363 34.7
Hund12782 Selenicereus undatus HOM05D006361 ORTHO05D007824 4.2e-41 172.9 137 65.7
Haze_10738 Corylus avellana HOM05D006361 ORTHO05D007824 7.5e-38 162.2 217 48.8
arahy.Tifrunner.gnm1.ann1.10LCJA Arachis hypogaea HOM05D006361 ORTHO05D007824 3.1e-36 156.8 296 38.9
Actinidia34045 Actinidia chinensis HOM05D006361 ORTHO05D007824 4.5e-27 126.3 130 53.8
MBI06_g04759_MAGBIO Magnolia biondii HOM05D006361 ORTHO05D007824 8.6e-26 122.1 89 69.7
Actinidia34046 Actinidia chinensis HOM05D006361 ORTHO05D007824 4.7e-24 116.3 80 72.5
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 1.2e-22 111.7 471 25.3
VMungo0251G1708 Vigna mungo HOM05D006361 ORTHO05D007824 8.3e-21 105.5 121 47.9
Pp3c10_230 Physcomitrium patens HOM05D006361 ORTHO05D007824 4.1e-20 103.2 252 31.0
Glyma.10G280900 Glycine max HOM05D006361 ORTHO05D007824 2.7e-19 100.5 227 32.6
SMO115G0015 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 3.9e-18 96.7 266 27.8
SMO166G0069 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 3.3e-17 93.6 200 31.0
Cc00_g30730 Coffea canephora HOM05D006361 ORTHO05D007824 2.1e-16 90.9 89 56.2
Oeu038968.1 Olea europaea HOM05D006361 ORTHO05D007824 1.0e-15 88.6 194 37.1
Zm00001eb250300 Zea mays HOM05D006361 ORTHO05D007824 2.3e-15 87.4 127 43.3
Sabra19G0029800 Salix brachista HOM05D006361 ORTHO05D007824 2.6e-14 84.0 76 59.2
QL03p040408 Quercus lobata HOM05D006361 ORTHO05D007824 3.5e-11 73.6 43 76.7
Cc00_g15950 Coffea canephora HOM05D006361 ORTHO05D007824 3.9e-10 70.1 59 59.3
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 3.9e-10 70.1 51 60.8
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 3.9e-10 70.1 73 46.6
Hma1.2p1_0068F.1_g037180 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 8.6e-10 68.9 57 61.4
Cc00_g35660 Coffea canephora HOM05D006361 ORTHO05D007824 1.9e-09 67.8 76 48.7


User provided reference genes

Program Settings