Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.005G149800 Gossypium raimondii HOM05D008160 ORTHO05D009635 2.5e-70 268.9 154 100.0
Gohir.D02G133900 Gossypium hirsutum HOM05D008160 ORTHO05D009635 6.1e-69 264.2 155 99.4
Gohir.A03G108800 Gossypium hirsutum HOM05D008160 ORTHO05D009635 2.0e-67 259.2 154 97.4
Thecc.02G314100 Theobroma cacao HOM05D008160 ORTHO05D009635 2.2e-34 149.4 164 56.1
COL.COLO4_27706 Corchorus olitorius HOM05D008160 ORTHO05D009635 8.1e-21 104.4 156 48.1
Gohir.D13G088500 Gossypium hirsutum HOM05D008160 ORTHO05D009635 1.5e-19 100.1 155 42.6
Gohir.A13G094500 Gossypium hirsutum HOM05D008160 ORTHO05D009635 1.3e-18 97.1 155 42.6
Gorai.013G101200 Gossypium raimondii HOM05D008160 ORTHO05D009635 1.3e-18 97.1 155 42.6
Cfa014402 Carpinus fangiana HOM05D008160 ORTHO05D009635 8.4e-18 94.4 94 59.6
Haze_12867 Corylus avellana HOM05D008160 ORTHO05D009635 1.1e-17 94.0 93 57.0
QL06p012138 Quercus lobata HOM05D008160 ORTHO05D009635 1.4e-17 93.6 161 42.2
QL08p033125 Quercus lobata HOM05D008160 ORTHO05D009635 1.4e-17 93.6 161 42.2
MD09G1108700 Malus domestica HOM05D008160 ORTHO05D009635 1.2e-16 90.5 96 56.2
Prupe.3G217400 Prunus persica HOM05D008160 ORTHO05D009635 3.5e-16 89.0 92 56.5
TWI36G0727 Tripterygium wilfordii HOM05D008160 ORTHO05D009635 3.5e-16 89.0 156 40.4
TPR.G4649 Trifolium pratense HOM05D008160 ORTHO05D009635 2.3e-15 86.3 152 36.2
TWI75G1754 Tripterygium wilfordii HOM05D008160 ORTHO05D009635 2.3e-15 86.3 156 38.5
Potri.014G153200 Populus trichocarpa HOM05D008160 ORTHO05D009635 1.5e-14 83.6 165 37.0
Manes.12G074700 Manihot esculenta HOM05D008160 ORTHO05D009635 9.6e-14 80.9 156 37.8
Lj3g0006762 Lotus japonicus HOM05D008160 ORTHO05D009635 2.1e-13 79.7 160 38.8
CiPaw.03G160200 Carya illinoinensis HOM05D008160 ORTHO05D009635 3.6e-13 79.0 92 50.0
FAN09G3148 Fragaria x ananassa HOM05D008160 ORTHO05D009635 6.2e-13 78.2 97 53.6
Thecc.02G314300 Theobroma cacao HOM05D008160 ORTHO05D009635 6.2e-13 78.2 157 42.0
Sabra02G0175400 Salix brachista HOM05D008160 ORTHO05D009635 8.1e-13 77.8 157 36.3
CsaV3_2G034970 Cucumis sativus L. HOM05D008160 ORTHO05D009635 1.1e-12 77.4 152 37.5
Potri.002G229300 Populus trichocarpa HOM05D008160 ORTHO05D009635 1.4e-12 77.0 166 36.1
RcHm_v2.0_Chr2g0159421 Rosa chinensis HOM05D008160 ORTHO05D009635 1.4e-12 77.0 97 52.6
Dinv05432 Davidia involucrata HOM05D008160 ORTHO05D009635 1.8e-12 76.6 94 53.2
FAN02G3260 Fragaria x ananassa HOM05D008160 ORTHO05D009635 1.8e-12 76.6 97 52.6
RcHm_v2.0_Chr2g0159311 Rosa chinensis HOM05D008160 ORTHO05D009635 1.8e-12 76.6 97 53.6
TAR624G1256 Trochodendron aralioides HOM05D008160 ORTHO05D009635 2.4e-12 76.3 158 37.3
FAN10G1253 Fragaria x ananassa HOM05D008160 ORTHO05D009635 4.0e-12 75.5 97 51.5
FAN14G2424 Fragaria x ananassa HOM05D008160 ORTHO05D009635 4.0e-12 75.5 97 51.5
Hma1.2p1_0328F.1_g126920 Hydrangea macrophylla HOM05D008160 ORTHO05D009635 5.3e-12 75.1 73 60.3
TAR626G0785 Trochodendron aralioides HOM05D008160 ORTHO05D009635 5.3e-12 75.1 158 36.1
Psat7g157360 Pisum sativum HOM05D008160 ORTHO05D009635 6.9e-12 74.7 152 34.2
FvH4_6g43200 Fragaria vesca HOM05D008160 ORTHO05D009635 1.2e-11 73.9 97 50.5
Nn1g03539 Nelumbo nucifera HOM05D008160 ORTHO05D009635 2.0e-11 73.2 90 47.8
CANSAT64G2131 Cannabis sativa HOM05D008160 ORTHO05D009635 2.6e-11 72.8 172 36.0
Ciclev10017235m.g Citrus clementina HOM05D008160 ORTHO05D009635 2.6e-11 72.8 79 51.9
Glyma.06G305400 Glycine max HOM05D008160 ORTHO05D009635 4.5e-11 72.0 163 33.7
Lalb_Chr03g0028751 Lupinus albus HOM05D008160 ORTHO05D009635 1.3e-10 70.5 134 34.3
CiPaw.04G116300 Carya illinoinensis HOM05D008160 ORTHO05D009635 1.7e-10 70.1 94 47.9
Glyma.12G099100 Glycine max HOM05D008160 ORTHO05D009635 1.7e-10 70.1 158 35.4
MELO3C019266.2 Cucumis melo HOM05D008160 ORTHO05D009635 2.2e-10 69.7 154 33.8
Lalb_Chr19g0135851 Lupinus albus HOM05D008160 ORTHO05D009635 4.9e-10 68.6 161 35.4
ClCG02G008690 Citrullus lanatus HOM05D008160 ORTHO05D009635 6.4e-10 68.2 154 32.5
Cpa.g.sc8.214 Carica papaya HOM05D008160 ORTHO05D009635 7.1e-09 64.7 164 34.1
VMungo1127G0429 Vigna mungo HOM05D008160 ORTHO05D009635 1.6e-08 63.5 160 33.1
Glyma.13G308600 Glycine max HOM05D008160 ORTHO05D009635 2.1e-08 63.2 80 46.2
ATR0752G071 Amborella trichopoda HOM05D008160 ORTHO05D009635 3.5e-08 62.4 96 43.8
TPR.G4242 Trifolium pratense HOM05D008160 ORTHO05D009635 3.5e-08 62.4 93 38.7
CARHR097620 Cardamine hirsuta HOM05D010757 ORTHO05D009635 6.0e-08 61.6 84 44.0
Medtr4g048060 Medicago truncatula HOM05D008160 ORTHO05D009635 6.0e-08 61.6 154 32.5
Ca_26933_v3 Cicer arietinum L. HOM05D008160 ORTHO05D009635 7.9e-08 61.2 153 33.3
Phvul.011G104000 Phaseolus vulgaris HOM05D008160 ORTHO05D009635 1.0e-07 60.8 77 48.1
Glyma.12G193900 Glycine max HOM05D008160 ORTHO05D009635 2.3e-07 59.7 80 46.2
Ca_01599_v3 Cicer arietinum L. HOM05D008160 ORTHO05D009635 5.1e-07 58.5 81 42.0
Sp3g19690 Schrenkiella parvula HOM05D010757 ORTHO05D009635 5.1e-07 58.5 93 41.9
Atru.chr6.3179 Acer truncatum HOM05D008160 ORTHO05D009635 8.7e-07 57.8 87 46.0
ATR0661G403 Amborella trichopoda HOM05D008160 ORTHO05D009635 8.7e-07 57.8 87 37.9
AT3G21680 Arabidopsis thaliana HOM05D010757 ORTHO05D009635 8.7e-07 57.8 84 39.3
C03p51830 Brassica napus HOM05D010757 ORTHO05D009635 8.7e-07 57.8 84 40.5
Rhsim04G0053300 Rhododendron simsii HOM05D000003 ORTHO05D000006 8.7e-07 57.8 72 54.2
AL3G35800 Arabidopsis lyrata HOM05D010757 ORTHO05D009635 1.1e-06 57.4 85 40.0
arahy.Tifrunner.gnm1.ann1.MX58RG Arachis hypogaea HOM05D008160 ORTHO05D009635 1.1e-06 57.4 71 45.1
PGSC0003DMG400028963 Solanum tuberosum HOM05D046998 ORTHO05D009635 1.5e-06 57.0 109 39.4
Thhalv10022045m.g Eutrema salsugineum HOM05D010757 ORTHO05D009635 1.9e-06 56.6 83 38.6
LjContig00412g0003580 Lotus japonicus HOM05D008160 ORTHO05D009635 1.9e-06 56.6 91 44.0
A01p33300 Brassica napus HOM05D010757 ORTHO05D009635 2.5e-06 56.2 85 47.1
Carub.0003s2173 Capsella rubella HOM05D010757 ORTHO05D009635 2.5e-06 56.2 81 40.7
Aqoxy1G02168 Aquilegia oxysepala HOM05D034144 ORTHO05D009635 5.6e-06 55.1 97 39.2
PGR042G1178 Punica granatum HOM05D008160 ORTHO05D009635 5.6e-06 55.1 83 47.0
C01p42560 Brassica napus HOM05D010757 ORTHO05D009635 7.4e-06 54.7 85 45.9
BolC1t04209H Brassica oleracea HOM05D010757 ORTHO05D009635 7.4e-06 54.7 85 45.9
BraA01t03447Z Brassica rapa HOM05D010757 ORTHO05D009635 7.4e-06 54.7 85 45.9
BraA01t03448Z Brassica rapa HOM05D010757 ORTHO05D009635 7.4e-06 54.7 85 45.9
BcaC01g03493 Brassica carinata HOM05D010757 ORTHO05D009635 9.6e-06 54.3 84 39.3
Eucgr.A01130 Eucalyptus grandis HOM05D008160 ORTHO05D009635 9.6e-06 54.3 138 34.1


User provided reference genes

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