Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.005G149300 Gossypium raimondii HOM05D004568 ORTHO05D005343 6.5e-211 737.3 406 100.0
Gohir.D02G133400 Gossypium hirsutum HOM05D004568 ORTHO05D005343 5.2e-208 727.6 407 99.3
Gohir.A03G108200 Gossypium hirsutum HOM05D004568 ORTHO05D005343 3.5e-204 714.9 406 98.0
Duzib251G0342 Durio zibethinus HOM05D004568 ORTHO05D005343 3.5e-148 528.9 393 78.1
Thecc.02G315200 Theobroma cacao HOM05D004568 ORTHO05D005343 1.4e-144 516.9 408 69.9
Duzib268G1242 Durio zibethinus HOM05D004568 ORTHO05D005343 1.5e-143 513.5 409 74.6
Thecc.09G210800 Theobroma cacao HOM05D004568 ORTHO05D005343 2.4e-136 489.6 395 73.7
Duzib168G1705 Durio zibethinus HOM05D004568 ORTHO05D005343 1.2e-132 477.2 398 73.6
COL.COLO4_27716 Corchorus olitorius HOM05D004568 ORTHO05D005343 4.2e-117 425.6 419 61.6
COL.COLO4_34999 Corchorus olitorius HOM05D004568 ORTHO05D005343 2.6e-103 379.8 428 53.7
Ciclev10033580m.g Citrus clementina HOM05D004568 ORTHO05D005343 2.1e-100 370.2 415 61.7
Atru.chr11.1442 Acer truncatum HOM05D004568 ORTHO05D005343 6.1e-100 368.6 409 56.7
Atru.chr11.1472 Acer truncatum HOM05D004568 ORTHO05D005343 6.1e-100 368.6 409 56.7
Cfa008803 Carpinus fangiana HOM05D004568 ORTHO05D005343 3.9e-99 365.9 400 56.2
CiPaw.05G118300 Carya illinoinensis HOM05D004568 ORTHO05D005343 7.4e-98 361.7 412 56.6
Gohir.A12G157850 Gossypium hirsutum HOM05D004568 ORTHO05D005343 3.7e-97 359.4 399 56.9
Gohir.A12G157951 Gossypium hirsutum HOM05D004568 ORTHO05D005343 3.7e-97 359.4 399 56.9
Gohir.D12G160800 Gossypium hirsutum HOM05D004568 ORTHO05D005343 1.5e-95 354.0 398 56.3
Potri.T062072 Populus trichocarpa HOM05D004568 ORTHO05D005343 3.8e-94 349.4 413 56.7
Potri.008G109600 Populus trichocarpa HOM05D004568 ORTHO05D005343 5.0e-94 349.0 413 56.7
Potri.010G133600 Populus trichocarpa HOM05D004568 ORTHO05D005343 4.7e-92 342.4 422 55.2
VMungo1215G2036 Vigna mungo HOM05D004568 ORTHO05D005343 4.7e-92 342.4 404 54.7
Cpa.g.sc1.257 Carica papaya HOM05D004568 ORTHO05D005343 1.8e-91 340.5 398 52.8
QL03p044380 Quercus lobata HOM05D004568 ORTHO05D005343 4.4e-90 335.9 403 52.6
Sabra10G0102200 Salix brachista HOM05D004568 ORTHO05D005343 5.7e-90 335.5 417 55.6
Manes.06G076600 Manihot esculenta HOM05D004568 ORTHO05D005343 7.4e-90 335.1 404 50.5
Gorai.008G173800 Gossypium raimondii HOM05D004568 ORTHO05D005343 1.3e-89 334.3 399 54.4
CiPaw.06G097400 Carya illinoinensis HOM05D004568 ORTHO05D005343 1.6e-87 327.4 404 55.4
Prupe.1G299900 Prunus persica HOM05D004568 ORTHO05D005343 1.5e-85 320.9 420 52.4
ClCG05G023290 Citrullus lanatus HOM05D004568 ORTHO05D005343 6.1e-84 315.5 402 54.5
Lj2g0022626 Lotus japonicus HOM05D004568 ORTHO05D005343 5.2e-83 312.4 413 48.4
Lalb_Chr10g0099511 Lupinus albus HOM05D004568 ORTHO05D005343 1.3e-81 307.8 399 52.1
Manes.14G094400 Manihot esculenta HOM05D004568 ORTHO05D005343 1.3e-81 307.8 404 50.5
CANSAT64G0418 Cannabis sativa HOM05D004568 ORTHO05D005343 1.1e-80 304.7 426 47.9
Phvul.003G034500 Phaseolus vulgaris HOM05D004568 ORTHO05D005343 1.6e-79 300.8 325 54.8
TWI75G0122 Tripterygium wilfordii HOM05D004568 ORTHO05D005343 5.9e-79 298.9 407 48.2
Gohir.D13G217400 Gossypium hirsutum HOM05D004568 ORTHO05D005343 7.7e-79 298.5 403 51.9
Gorai.013G247900 Gossypium raimondii HOM05D004568 ORTHO05D005343 7.7e-79 298.5 403 51.9
TWI79G0507 Tripterygium wilfordii HOM05D004568 ORTHO05D005343 1.0e-78 298.1 416 46.2
CsaV3_5G033720 Cucumis sativus L. HOM05D004568 ORTHO05D005343 2.2e-78 297.0 406 53.0
Sabra08G0083400 Salix brachista HOM05D004568 ORTHO05D005343 5.0e-78 295.8 410 49.0
MELO3C012188.2 Cucumis melo HOM05D004568 ORTHO05D005343 6.5e-78 295.4 401 53.4
Gohir.A13G213600 Gossypium hirsutum HOM05D004568 ORTHO05D005343 3.2e-77 293.1 403 54.6
MD13G1052200 Malus domestica HOM05D004568 ORTHO05D005343 1.2e-74 284.6 421 46.1
Ca_05120_v3 Cicer arietinum L. HOM05D004568 ORTHO05D005343 2.4e-72 276.9 410 51.7
MD16G1057700 Malus domestica HOM05D004568 ORTHO05D005343 5.4e-72 275.8 436 41.7
TWI31G1373 Tripterygium wilfordii HOM05D004568 ORTHO05D005343 2.0e-71 273.9 402 46.3
Sed0022479 Sechium edule HOM05D004568 ORTHO05D005343 4.5e-71 272.7 402 46.5
RcHm_v2.0_Chr4g0436671 Rosa chinensis HOM05D004568 ORTHO05D005343 1.3e-70 271.2 418 48.1
FAN07G0048 Fragaria x ananassa HOM05D004568 ORTHO05D005343 8.6e-70 268.5 421 47.3
FAN17G1809 Fragaria x ananassa HOM05D004568 ORTHO05D005343 7.2e-69 265.4 429 46.4
FAN22G1274 Fragaria x ananassa HOM05D004568 ORTHO05D005343 1.6e-68 264.2 429 46.2
FAN12G0798 Fragaria x ananassa HOM05D004568 ORTHO05D005343 2.1e-68 263.8 429 46.4
TPR.G2653 Trifolium pratense HOM05D004568 ORTHO05D005343 1.0e-67 261.5 417 50.4
FvH4_4g28580 Fragaria vesca HOM05D004568 ORTHO05D005343 1.8e-67 260.8 429 46.2
Glyma.02G128700 Glycine max HOM05D004568 ORTHO05D005343 4.9e-65 252.7 422 40.8
Eucgr.G02393 Eucalyptus grandis HOM05D004568 ORTHO05D005343 2.4e-64 250.4 431 47.3
Glyma.04G152800 Glycine max HOM05D004568 ORTHO05D005343 1.6e-63 247.7 420 40.0
Dinv16554 Davidia involucrata HOM05D004568 ORTHO05D005343 6.6e-62 242.3 386 47.9
Haze_11818 Corylus avellana HOM05D004568 ORTHO05D005343 1.1e-61 241.5 234 62.0
Hma1.2p1_1424F.1_g282720 Hydrangea macrophylla HOM05D004568 ORTHO05D005343 3.3e-61 240.0 395 41.5
Medtr6g472100 Medicago truncatula HOM05D004568 ORTHO05D005343 9.5e-61 238.4 398 49.0
PGR119G0824 Punica granatum HOM05D004568 ORTHO05D005343 1.2e-60 238.0 431 46.4
Psat2g096280 Pisum sativum HOM05D004568 ORTHO05D005343 3.2e-56 223.4 410 46.1
Peaxi162Scf00208g00131 Petunia axillaris HOM05D004568 ORTHO05D005343 6.0e-55 219.2 400 40.5
THA.LOC104824044 Tarenaya hassleriana HOM05D004568 ORTHO05D005343 5.6e-53 212.6 481 42.2
Nitab4.5_0001554g0060 Nicotiana tabacum HOM05D004568 ORTHO05D005343 1.1e-51 208.4 415 39.5
Sc04g0007050 Simmondsia chinensis HOM05D004568 ORTHO05D005343 2.0e-50 204.1 399 36.3
arahy.Tifrunner.gnm1.ann1.35X7C5 Arachis hypogaea HOM05D004568 ORTHO05D005343 2.6e-50 203.8 422 38.2
CSS0002717 Camellia sinensis var. sinensis HOM05D004568 ORTHO05D005343 7.5e-50 202.2 417 43.2
Nitab4.5_0004681g0010 Nicotiana tabacum HOM05D004568 ORTHO05D005343 9.8e-50 201.8 415 38.8
GSVIVG01012027001 Vitis vinifera HOM05D004568 ORTHO05D005343 2.2e-49 200.7 260 51.5
THA.LOC104805234 Tarenaya hassleriana HOM05D004568 ORTHO05D005343 1.4e-48 198.0 483 40.6
Hma1.2p1_1459F.1_g284900 Hydrangea macrophylla HOM05D004568 ORTHO05D005343 4.1e-48 196.4 394 36.8
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 9.2e-48 195.3 308 42.2
CSS0045744 Camellia sinensis var. sinensis HOM05D004568 ORTHO05D005343 7.8e-47 192.2 397 38.3
Rhsim09G0116400 Rhododendron simsii HOM05D004568 ORTHO05D005343 1.3e-46 191.4 411 40.9
PGSC0003DMG400002843 Solanum tuberosum HOM05D004568 ORTHO05D005343 1.3e-46 191.4 402 42.3
Aa31LG2G6720 Aethionema arabicum HOM05D004568 ORTHO05D005343 2.3e-46 190.7 484 37.6
Oeu033529.1 Olea europaea HOM05D004568 ORTHO05D005343 8.6e-46 188.7 405 36.0
arahy.Tifrunner.gnm1.ann1.Y3DNXR Arachis hypogaea HOM05D004568 ORTHO05D005343 1.5e-45 188.0 420 36.4
Rhsim09G0116100 Rhododendron simsii HOM05D004568 ORTHO05D005343 1.9e-45 187.6 411 41.1
Solyc04g005920.1 Solanum lycopersicum HOM05D004568 ORTHO05D005343 1.1e-43 181.8 345 42.6
PSO063G5818 Papaver somniferum HOM05D004568 ORTHO05D005343 2.3e-43 180.6 410 41.0
Sopen04g001970 Solanum pennellii HOM05D004568 ORTHO05D005343 3.1e-43 180.3 345 42.3
PSO782G5402 Papaver somniferum HOM05D004568 ORTHO05D005343 4.0e-43 179.9 410 42.7
SalBow8G3235 Salvia bowleyana HOM05D004568 ORTHO05D005343 1.5e-42 177.9 398 36.4
SalBow8G5572 Salvia bowleyana HOM05D004568 ORTHO05D005343 1.5e-42 177.9 398 36.4
Lsat_1_v5_gn_3_58841 Lactuca sativa HOM05D004568 ORTHO05D005343 2.6e-42 177.2 321 48.6
Aqoxy3G03818 Aquilegia oxysepala HOM05D004568 ORTHO05D005343 4.4e-42 176.4 396 41.4
Migut.L01125 Erythranthe guttata HOM05D004568 ORTHO05D005343 1.3e-41 174.9 415 34.9
DCAR_026699 Daucus carota HOM05D004568 ORTHO05D005343 2.9e-41 173.7 393 38.4
TAR374G1393 Trochodendron aralioides HOM05D004568 ORTHO05D005343 1.1e-40 171.8 407 34.4
ECA246G3306 Erigeron canadensis HOM05D004568 ORTHO05D005343 2.4e-40 170.6 336 47.3
Thhalv10004268m.g Eutrema salsugineum HOM05D004568 ORTHO05D005343 2.4e-40 170.6 485 37.1
Nn3g17622 Nelumbo nucifera HOM05D004568 ORTHO05D005343 3.2e-40 170.2 399 36.6
HanXRQChr17g0551111 Helianthus annuus HOM05D004568 ORTHO05D005343 1.6e-36 157.9 344 44.8
HanXRQChr17g0551511 Helianthus annuus HOM05D004568 ORTHO05D005343 1.6e-36 157.9 344 44.8
BolC2t11302H Brassica oleracea HOM05D004568 ORTHO05D005343 4.7e-36 156.4 455 32.5
BraA02t08408Z Brassica rapa HOM05D004568 ORTHO05D005343 1.1e-35 155.2 454 37.0
A09p24900 Brassica napus HOM05D004568 ORTHO05D005343 8.9e-35 152.1 422 33.2
Sp2g14860 Schrenkiella parvula HOM05D004568 ORTHO05D005343 1.2e-34 151.8 425 38.6
BcaC03g17273 Brassica carinata HOM05D004568 ORTHO05D005343 4.4e-34 149.8 440 32.7
AT3G25590 Arabidopsis thaliana HOM05D004568 ORTHO05D005343 9.9e-34 148.7 498 32.5
EL10Ac6g14584 Beta vulgaris HOM05D004568 ORTHO05D005343 1.9e-32 144.4 407 34.2
TAR622G0675 Trochodendron aralioides HOM05D004568 ORTHO05D005343 9.2e-32 142.1 398 38.9
BcaB07g30266 Brassica carinata HOM05D004568 ORTHO05D005343 1.2e-31 141.7 464 32.3
AL5G14100 Arabidopsis lyrata HOM05D004568 ORTHO05D005343 2.1e-31 141.0 498 34.5
HanXRQChr12g0365221 Helianthus annuus HOM05D004568 ORTHO05D005343 4.6e-31 139.8 339 35.4
A06p42720 Brassica napus HOM05D004568 ORTHO05D005343 1.0e-30 138.7 445 29.7
A02p33910 Brassica napus HOM05D004568 ORTHO05D005343 1.7e-30 137.9 401 38.4
C07p34410 Brassica napus HOM05D004568 ORTHO05D005343 3.9e-30 136.7 454 29.3
BolC7t43969H Brassica oleracea HOM05D004568 ORTHO05D005343 1.5e-29 134.8 454 29.1
Lsat_1_v5_gn_8_37860 Lactuca sativa HOM05D004568 ORTHO05D005343 1.5e-29 134.8 398 39.2
BcaC06g33977 Brassica carinata HOM05D004568 ORTHO05D005343 4.3e-29 133.3 454 28.9
BraA06t27185Z Brassica rapa HOM05D004568 ORTHO05D005343 5.6e-29 132.9 446 28.9
DCAR_030135 Daucus carota HOM05D004568 ORTHO05D005343 7.3e-29 132.5 372 32.0
vmacro10495 Vaccinium macrocarpon HOM05D004568 ORTHO05D005343 9.6e-29 132.1 394 39.3
Carub.0005s0337 Capsella rubella HOM05D004568 ORTHO05D005343 2.1e-28 131.0 463 35.6
AUR62007782 Chenopodium quinoa HOM05D004568 ORTHO05D005343 2.8e-28 130.6 409 32.5
Solyc05g010450.1 Solanum lycopersicum HOM05D004568 ORTHO05D005343 2.8e-28 130.6 354 36.2
Sopen05g006240 Solanum pennellii HOM05D004568 ORTHO05D005343 2.8e-28 130.6 354 36.2
BolC9t56047H Brassica oleracea HOM05D004568 ORTHO05D005343 1.1e-27 128.6 407 33.4
AUR62039200 Chenopodium quinoa HOM05D004568 ORTHO05D005343 1.1e-27 128.6 426 32.4
C02p52170 Brassica napus HOM05D004568 ORTHO05D005343 2.4e-27 127.5 437 30.7
PGSC0003DMG400007516 Solanum tuberosum HOM05D004568 ORTHO05D005343 2.4e-27 127.5 351 34.5
C09p31920 Brassica napus HOM05D004568 ORTHO05D005343 6.9e-27 125.9 407 33.2
Cc11_g11080 Coffea canephora HOM05D004568 ORTHO05D005343 9.0e-27 125.6 171 59.6
BcaC04g21427 Brassica carinata HOM05D004568 ORTHO05D005343 2.6e-26 124.0 410 30.2
SGA_v2.0_scaffold36G14507 Striga asiatica HOM05D004568 ORTHO05D005343 4.4e-26 123.2 274 34.3
HanXRQChr08g0214641 Helianthus annuus HOM05D004568 ORTHO05D005343 2.9e-25 120.6 243 42.0
HanXRQChr08g0214671 Helianthus annuus HOM05D004568 ORTHO05D005343 2.9e-25 120.6 243 42.0
BcaB07g30637 Brassica carinata HOM05D004568 ORTHO05D005343 6.4e-25 119.4 436 34.2
Nitab4.5_0012448g0010 Nicotiana tabacum HOM05D004568 ORTHO05D005343 1.1e-24 118.6 231 42.4
BraA09t38078Z Brassica rapa HOM05D004568 ORTHO05D005343 1.9e-24 117.9 233 37.8
BcaC06g31131 Brassica carinata HOM05D004568 ORTHO05D005343 1.2e-23 115.2 451 32.2
Actinidia37881 Actinidia chinensis HOM05D004568 ORTHO05D005343 4.6e-23 113.2 317 32.8
AUR62019434 Chenopodium quinoa HOM05D000052 ORTHO05D000046 3.0e-22 110.5 341 32.6
SGA_v2.0_scaffold16G07859 Striga asiatica HOM05D004568 ORTHO05D005343 1.5e-21 108.2 397 29.7
unitig_747.g21193 Utricularia gibba HOM05D004568 ORTHO05D005343 1.9e-21 107.8 197 38.1
Lj3P1023T52 Lonicera japonica HOM05D004568 ORTHO05D005343 5.6e-21 106.3 227 39.6
BcaC04g21428 Brassica carinata HOM05D004568 ORTHO05D005343 8.1e-20 102.4 342 31.6
CDE04G2972 Ceratophyllum demersum HOM05D004568 ORTHO05D005343 6.4e-17 92.8 207 34.3
Ah.04g164810 Amaranthus hybridus HOM05D004568 ORTHO05D005343 9.3e-16 89.0 329 30.7
Haze_11819 Corylus avellana HOM05D004568 ORTHO05D005343 1.6e-15 88.2 112 49.1
ECA233G1390 Erigeron canadensis HOM05D004568 ORTHO05D005343 1.1e-11 75.5 221 35.7
Actinidia30170 Actinidia chinensis HOM05D004568 ORTHO05D005343 6.9e-11 72.8 132 55.3
Ah.06g195100 Amaranthus hybridus HOM05D004568 ORTHO05D005343 4.9e-09 66.6 420 25.5
Haze_07821 Corylus avellana HOM05D004568 ORTHO05D005343 9.3e-08 62.4 56 64.3
unitig_26.g10277 Utricularia gibba HOM05D004568 ORTHO05D005343 1.3e-06 58.5 200 30.0


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