Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.005G137600 Gossypium raimondii HOM05D006903 ORTHO05D008655 2.7e-250 868.2 445 100.0
Duzib248G0677 Durio zibethinus HOM05D006903 ORTHO05D008655 9.4e-187 657.1 451 76.9
Gohir.D02G116200 Gossypium hirsutum HOM05D006903 ORTHO05D008655 4.5e-165 585.1 306 98.4
Gohir.A03G097100 Gossypium hirsutum HOM05D006903 ORTHO05D008655 5.9e-165 584.7 306 98.7
COL.COLO4_07859 Corchorus olitorius HOM05D006903 ORTHO05D008655 1.5e-163 580.1 457 70.2
Haze_17427 Corylus avellana HOM05D006903 ORTHO05D008655 5.7e-160 568.2 443 64.8
Haze_17428 Corylus avellana HOM05D006903 ORTHO05D008655 5.7e-160 568.2 443 64.8
QL01p001027 Quercus lobata HOM05D006903 ORTHO05D008655 1.8e-158 563.1 419 68.0
Dinv16514 Davidia involucrata HOM05D006903 ORTHO05D008655 4.7e-154 548.5 417 66.2
GSVIVG01011964001 Vitis vinifera HOM05D006903 ORTHO05D008655 8.0e-154 547.7 447 64.0
Rhsim09G0113100 Rhododendron simsii HOM05D006903 ORTHO05D008655 1.8e-153 546.6 402 68.4
Actinidia14845 Actinidia chinensis HOM05D006903 ORTHO05D008655 8.9e-153 544.3 426 66.0
CANSAT64G1629 Cannabis sativa HOM05D006903 ORTHO05D008655 3.4e-152 542.3 444 63.7
CSS0045037 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 2.8e-151 539.3 407 67.3
CiPaw.16G002500 Carya illinoinensis HOM05D006903 ORTHO05D008655 1.1e-150 537.3 428 65.4
Prupe.1G304300 Prunus persica HOM05D006903 ORTHO05D008655 1.8e-150 536.6 454 62.6
Cpa.g.sc1.226 Carica papaya HOM05D006903 ORTHO05D008655 2.3e-148 529.6 406 67.2
MD13G1047700 Malus domestica HOM05D006903 ORTHO05D008655 1.1e-147 527.3 453 62.5
Peaxi162Scf00367g00739 Petunia axillaris HOM05D006903 ORTHO05D008655 1.9e-147 526.6 399 67.4
FAN12G3275 Fragaria x ananassa HOM05D006903 ORTHO05D008655 4.3e-147 525.4 448 61.6
FAN22G1870 Fragaria x ananassa HOM05D006903 ORTHO05D008655 7.3e-147 524.6 407 65.8
RcHm_v2.0_Chr4g0435961 Rosa chinensis HOM05D006903 ORTHO05D008655 7.3e-147 524.6 452 61.7
Sabra10G0099600 Salix brachista HOM05D006903 ORTHO05D008655 1.2e-146 523.9 415 65.3
FvH4_4g28200 Fragaria vesca HOM05D006903 ORTHO05D008655 1.6e-146 523.5 448 61.6
Nitab4.5_0005803g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 1.5e-144 516.9 443 62.1
Potri.010G130700 Populus trichocarpa HOM05D006903 ORTHO05D008655 2.2e-143 513.1 457 60.8
Thhalv10007585m.g Eutrema salsugineum HOM05D006903 ORTHO05D008655 3.7e-143 512.3 454 61.2
CAN.G184.79 Capsicum annuum HOM05D006903 ORTHO05D008655 1.4e-142 510.4 410 64.1
Sopen05g005730 Solanum pennellii HOM05D006903 ORTHO05D008655 2.4e-142 509.6 399 65.7
Ca_26576_v3 Cicer arietinum L. HOM05D006903 ORTHO05D008655 3.2e-142 509.2 407 64.4
Sed0022387 Sechium edule HOM05D006903 ORTHO05D008655 1.2e-141 507.3 409 64.1
Sc04g0006770 Simmondsia chinensis HOM05D006903 ORTHO05D008655 1.6e-141 506.9 442 59.5
DCAR_030091 Daucus carota HOM05D006903 ORTHO05D008655 1.3e-140 503.8 422 63.0
PGR119G0052 Punica granatum HOM05D006903 ORTHO05D008655 1.3e-140 503.8 401 64.1
FAN17G3035 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.7e-140 503.4 406 64.5
Lj2g0014822 Lotus japonicus HOM05D006903 ORTHO05D008655 2.3e-140 503.1 408 64.0
AL1G39690 Arabidopsis lyrata HOM05D006903 ORTHO05D008655 3.0e-140 502.7 430 61.4
Phvul.003G026200 Phaseolus vulgaris HOM05D006903 ORTHO05D008655 3.9e-140 502.3 405 64.0
Migut.E00291 Erythranthe guttata HOM05D006903 ORTHO05D008655 5.0e-140 501.9 403 62.8
Lj3C1020T9 Lonicera japonica HOM05D006903 ORTHO05D008655 1.9e-139 500.0 456 59.9
Hund05771 Selenicereus undatus HOM05D006903 ORTHO05D008655 2.5e-139 499.6 460 57.0
VMungo1215G2648 Vigna mungo HOM05D006903 ORTHO05D008655 3.3e-139 499.2 424 62.0
Glyma.02G101000 Glycine max HOM05D006903 ORTHO05D008655 7.3e-139 498.0 399 64.9
Medtr5g053280 Medicago truncatula HOM05D006903 ORTHO05D008655 9.5e-139 497.7 427 60.7
Cc11_g10700 Coffea canephora HOM05D006903 ORTHO05D008655 3.6e-138 495.7 459 57.1
arahy.Tifrunner.gnm1.ann1.9PC4TR Arachis hypogaea HOM05D006903 ORTHO05D008655 1.1e-137 494.2 425 60.5
EL10Ac6g14516 Beta vulgaris HOM05D006903 ORTHO05D008655 1.1e-137 494.2 451 58.1
Eucgr.G02357 Eucalyptus grandis HOM05D006903 ORTHO05D008655 1.1e-137 494.2 415 62.2
CsaV3_5G033920 Cucumis sativus L. HOM05D006903 ORTHO05D008655 1.4e-137 493.8 453 59.6
Carub.0001s2488 Capsella rubella HOM05D006903 ORTHO05D008655 1.8e-137 493.4 455 58.7
CARHR025840 Cardamine hirsuta HOM05D006903 ORTHO05D008655 1.8e-137 493.4 453 60.0
BraA08t34657Z Brassica rapa HOM05D006903 ORTHO05D008655 3.1e-137 492.7 448 60.7
arahy.Tifrunner.gnm1.ann1.RDH5GK Arachis hypogaea HOM05D006903 ORTHO05D008655 4.0e-137 492.3 425 60.2
A08p27120 Brassica napus HOM05D006903 ORTHO05D008655 5.2e-137 491.9 448 60.3
SalBow8G1412 Salvia bowleyana HOM05D006903 ORTHO05D008655 6.8e-137 491.5 443 58.5
AT1G26090 Arabidopsis thaliana HOM05D006903 ORTHO05D008655 8.9e-137 491.1 453 58.5
Sp1g22600 Schrenkiella parvula HOM05D006903 ORTHO05D008655 8.9e-137 491.1 455 58.9
Oeu044621.1 Olea europaea HOM05D006903 ORTHO05D008655 3.4e-136 489.2 439 57.6
Aa31LG7G8910 Aethionema arabicum HOM05D006903 ORTHO05D008655 4.4e-136 488.8 456 58.3
Lalb_Chr04g0254991 Lupinus albus HOM05D006903 ORTHO05D008655 4.4e-136 488.8 404 62.9
C03p72740 Brassica napus HOM05D006903 ORTHO05D008655 5.8e-136 488.4 405 63.2
BolC3t19572H Brassica oleracea HOM05D006903 ORTHO05D008655 7.5e-136 488.0 405 63.5
Nitab4.5_0004705g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 9.8e-136 487.6 406 62.6
FAN07G2589 Fragaria x ananassa HOM05D006903 ORTHO05D008655 3.7e-135 485.7 409 61.9
Cfa018642 Carpinus fangiana HOM05D006903 ORTHO05D008655 2.4e-134 483.0 443 57.8
HanXRQChr15g0476011 Helianthus annuus HOM05D006903 ORTHO05D008655 5.4e-134 481.9 407 59.2
AUR62002930 Chenopodium quinoa HOM05D006903 ORTHO05D008655 2.7e-133 479.6 423 58.6
Aqoxy3G00382 Aquilegia oxysepala HOM05D006903 ORTHO05D008655 3.5e-133 479.2 430 59.8
Lsat_1_v5_gn_3_58300 Lactuca sativa HOM05D006903 ORTHO05D008655 6.0e-133 478.4 427 57.6
Nn3g17696 Nelumbo nucifera HOM05D006903 ORTHO05D008655 6.6e-132 474.9 412 59.7
TPR.G22411 Trifolium pratense HOM05D006903 ORTHO05D008655 8.6e-132 474.6 380 64.7
PSO478G5279 Papaver somniferum HOM05D006903 ORTHO05D008655 4.7e-130 468.8 437 56.1
Ciclev10033640m.g Citrus clementina HOM05D006903 ORTHO05D008655 8.1e-130 468.0 423 60.0
Thecc.02G362300 Theobroma cacao HOM05D006903 ORTHO05D008655 1.1e-129 467.6 295 80.0
ClCG05G023070 Citrullus lanatus HOM05D006903 ORTHO05D008655 2.6e-128 463.0 492 54.9
MBI10_g08549_MAGBIO Magnolia biondii HOM05D006903 ORTHO05D008655 5.8e-128 461.8 406 59.4
PGSC0003DMG400000822 Solanum tuberosum HOM05D006903 ORTHO05D008655 7.5e-128 461.5 374 64.2
BcaB03g12083 Brassica carinata HOM05D006903 ORTHO05D008655 1.7e-127 460.3 407 60.2
MELO3C012210.2 Cucumis melo HOM05D006903 ORTHO05D008655 7.1e-126 454.9 473 55.0
Atru.chr11.1372 Acer truncatum HOM05D006903 ORTHO05D008655 2.1e-125 453.4 331 69.5
TWI31G1007 Tripterygium wilfordii HOM05D006903 ORTHO05D008655 3.5e-125 452.6 359 64.9
ECA246G0069 Erigeron canadensis HOM05D006903 ORTHO05D008655 6.0e-125 451.8 376 62.0
ATR0053G028 Amborella trichopoda HOM05D006903 ORTHO05D008655 6.0e-117 425.2 405 56.5
unitig_62.g23710 Utricularia gibba HOM05D006903 ORTHO05D008655 1.9e-115 420.2 489 49.9
Manes.06G073100 Manihot esculenta HOM05D006903 ORTHO05D008655 2.5e-115 419.9 331 66.2
AUR62007740 Chenopodium quinoa HOM05D006903 ORTHO05D008655 2.9e-111 406.4 396 55.1
Psat0s629g0200 Pisum sativum HOM05D006903 ORTHO05D008655 4.2e-110 402.5 329 62.9
PSO017G3486 Papaver somniferum HOM05D006903 ORTHO05D008655 9.3e-110 401.4 355 57.2
SGA_v2.0_scaffold14G06815 Striga asiatica HOM05D006903 ORTHO05D008655 3.0e-108 396.4 332 61.1
Zm00001eb252440 Zea mays HOM05D006903 ORTHO05D008655 7.3e-107 391.7 397 52.4
Hma1.2p1_0406F.1_g145980 Hydrangea macrophylla HOM05D006903 ORTHO05D008655 3.3e-99 366.3 295 65.4
Ah.03g137980 Amaranthus hybridus HOM05D006903 ORTHO05D008655 3.7e-98 362.8 412 48.1
vmacro10523 Vaccinium macrocarpon HOM05D006903 ORTHO05D008655 2.0e-96 357.1 379 52.5
TAR629G3475 Trochodendron aralioides HOM05D006903 ORTHO05D008655 3.4e-96 356.3 294 61.6
AagrBONN_evm.TU.Sc2ySwM_117.1113 Anthoceros agrestis HOM05D006903 ORTHO05D008655 4.2e-94 349.4 407 46.7
SEGI_13133 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 2.1e-90 337.0 394 47.5
Pp3c6_9390 Physcomitrium patens HOM05D006903 ORTHO05D008655 9.0e-89 331.6 409 45.7
Solyc05g009920.4 Solanum lycopersicum HOM05D006903 ORTHO05D008655 4.2e-86 322.8 221 73.8
Mapoly0088s0003 Marchantia polymorpha HOM05D006903 ORTHO05D008655 6.7e-84 315.5 425 41.4
SMO367G1048 Selaginella moellendorffii HOM05D006903 ORTHO05D008655 8.5e-79 298.5 402 42.5
SEGI_18137 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 1.4e-78 297.7 331 49.2
HanXRQChr00c0584g0576181 Helianthus annuus HOM05D006903 ORTHO05D008655 4.6e-77 292.7 224 64.3
HPP92_003072 Vanilla planifolia HOM05D006903 ORTHO05D008655 3.4e-51 206.8 248 47.6
Os02g0711200 Oryza sativa ssp. japonica HOM05D006903 ORTHO05D008655 5.9e-48 196.1 164 59.8
GSVIVG01021676001 Vitis vinifera HOM05D006903 ORTHO05D008655 4.7e-45 186.4 185 55.7
CSS0042654 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 3.0e-44 183.7 147 66.7
HPP92_003073 Vanilla planifolia HOM05D006903 ORTHO05D008655 8.3e-42 175.6 164 54.3
Potri.008G115401 Populus trichocarpa HOM05D006903 ORTHO05D008655 5.4e-41 172.9 154 56.5
Glyma.01G089202 Glycine max HOM05D006903 ORTHO05D008655 7.0e-33 146.0 146 50.7
CSS0002023 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 1.5e-27 128.3 123 60.2
GSVIVG01031030001 Vitis vinifera HOM05D006903 ORTHO05D008655 3.4e-27 127.1 150 50.0
HanXRQChr00c0584g0576191 Helianthus annuus HOM05D006903 ORTHO05D008655 4.9e-26 123.2 104 55.8
GSVIVG01021677001 Vitis vinifera HOM05D006903 ORTHO05D008655 9.2e-25 119.0 96 63.5
TAR626G1973 Trochodendron aralioides HOM05D006903 ORTHO05D008655 6.0e-24 116.3 91 61.5
TAR629G0855 Trochodendron aralioides HOM05D006903 ORTHO05D008655 1.1e-17 95.5 72 62.5
GSVIVG01031031001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.0e-07 62.4 50 60.0


User provided reference genes

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