Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.005G131900 Gossypium raimondii HOM05D005158 ORTHO05D005510 5.7e-77 290.8 144 100.0
Gohir.D02G122150 Gossypium hirsutum HOM05D005158 ORTHO05D005510 4.2e-64 248.1 146 87.0
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 7.3e-48 194.1 150 66.7
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 2.3e-46 189.1 150 65.3
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 3.4e-45 185.3 151 63.6
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 5.4e-35 151.4 146 55.5
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 5.1e-33 144.8 148 49.3
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 4.0e-30 135.2 149 51.7
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 5.2e-30 134.8 146 51.4
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 6.8e-30 134.4 146 53.4
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 3.4e-29 132.1 139 55.4
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.3e-28 130.2 145 49.7
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 2.2e-28 129.4 144 54.9
Prupe.5G232900 Prunus persica HOM05D005158 ORTHO05D005510 2.9e-28 129.0 136 55.1
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 4.9e-28 128.3 145 48.3
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 4.9e-28 128.3 148 50.7
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 4.9e-28 128.3 150 52.0
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 6.4e-28 127.9 144 52.8
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.1e-27 127.1 149 46.3
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 1.4e-27 126.7 150 48.0
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 2.4e-27 125.9 143 53.8
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 4.1e-27 125.2 146 45.9
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 5.4e-27 124.8 145 49.0
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 2.1e-26 122.9 143 50.3
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 2.1e-26 122.9 141 47.5
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 2.1e-26 122.9 139 47.5
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 2.7e-26 122.5 149 47.0
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 3.5e-26 122.1 143 52.4
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 4.6e-26 121.7 149 47.0
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 6.0e-26 121.3 147 46.9
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 6.0e-26 121.3 149 45.6
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 6.0e-26 121.3 149 45.6
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 7.8e-26 120.9 149 45.6
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.0e-25 120.6 170 42.4
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.0e-25 120.6 146 45.9
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 1.3e-25 120.2 144 44.4
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 1.7e-25 119.8 142 52.1
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 2.3e-25 119.4 144 49.3
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 3.0e-25 119.0 141 48.9
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 3.0e-25 119.0 145 46.2
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 3.9e-25 118.6 141 48.2
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 5.1e-25 118.2 143 46.2
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 6.6e-25 117.9 149 45.0
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 1.1e-24 117.1 141 46.8
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 9.6e-24 114.0 110 50.9
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 1.6e-23 113.2 143 44.8
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 2.1e-23 112.8 149 43.6
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 2.8e-23 112.5 147 49.7
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.7e-23 111.7 145 43.4
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.7e-23 111.7 145 43.4
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 4.7e-23 111.7 144 46.5
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 6.2e-23 111.3 143 42.7
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 8.1e-23 110.9 147 43.5
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 2.4e-22 109.4 144 46.5
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 3.1e-22 109.0 136 45.6
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 4.0e-22 108.6 145 42.8
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 5.2e-22 108.2 145 46.2
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 5.2e-22 108.2 144 44.4
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 9.0e-22 107.5 136 44.9
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 1.2e-21 107.1 147 42.2
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 2.0e-21 106.3 144 43.8
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 2.0e-21 106.3 144 43.1
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 2.0e-21 106.3 133 46.6
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 2.0e-21 106.3 141 44.7
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 2.6e-21 105.9 141 45.4
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.4e-21 105.5 145 42.1
Oeu014055.2 Olea europaea HOM05D005158 ORTHO05D005510 5.8e-21 104.8 101 50.5
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 9.9e-21 104.0 138 45.7
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 1.7e-20 103.2 91 50.5
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 3.8e-20 102.1 151 41.7
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 4.9e-20 101.7 119 49.6
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 4.9e-20 101.7 138 44.9
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 8.4e-20 100.9 101 49.5
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.1e-19 100.5 83 54.2
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 1.4e-19 100.1 214 36.4
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.9e-19 99.8 90 53.3
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 2.4e-19 99.4 90 53.3
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 2.4e-19 99.4 141 44.0
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 7.1e-19 97.8 82 54.9
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 9.3e-19 97.4 98 52.0
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 9.3e-19 97.4 94 51.1
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 9.3e-19 97.4 82 53.7
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.1e-18 96.3 85 56.5
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 3.5e-18 95.5 145 40.7
Thecc.02G284700 Theobroma cacao HOM05D005158 ORTHO05D005510 3.5e-18 95.5 86 52.3
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 4.6e-18 95.1 106 48.1
HPP92_027195 Vanilla planifolia HOM05D005158 ORTHO05D005510 6.0e-18 94.7 112 47.3
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 7.8e-18 94.4 138 39.1
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 1.0e-17 94.0 144 38.9
Zm00001eb054470 Zea mays HOM05D005158 ORTHO05D005510 3.0e-17 92.4 133 44.4
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 3.9e-17 92.0 100 48.0
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 1.1e-16 90.5 157 40.1
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 1.5e-16 90.1 147 40.8
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 1.9e-16 89.7 81 50.6
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 9.6e-16 87.4 90 48.9
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 3.6e-15 85.5 74 54.1
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 8.1e-15 84.3 98 46.9
HanXRQChr08g0212291 Helianthus annuus HOM05D005158 ORTHO05D005510 8.1e-15 84.3 78 52.6
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 6.9e-14 81.3 70 52.9
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 9.0e-14 80.9 120 46.7
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 7.6e-13 77.8 83 49.4
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 1.3e-12 77.0 81 46.9
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 1.4e-11 73.6 95 40.0
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.4e-11 72.8 128 35.2
Os06g0269200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 4.2e-11 72.0 79 44.3
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 9.3e-11 70.9 148 35.8
Potri.008G130950 Populus trichocarpa HOM05D005158 ORTHO05D005510 1.0e-09 67.4 73 43.8
Peaxi162Scf00159g01110 Petunia axillaris HOM05D005158 ORTHO05D005510 2.3e-09 66.2 87 48.3
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 3.9e-09 65.5 36 69.4
DCAR_007307 Daucus carota HOM05D005158 ORTHO05D005510 5.1e-09 65.1 85 47.1
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 1.1e-08 63.9 36 66.7
TAR622G0559 Trochodendron aralioides HOM05D005158 ORTHO05D005510 1.1e-08 63.9 85 55.3
Solyc05g017940.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 4.3e-08 62.0 127 35.4
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 9.6e-08 60.8 41 56.1
Manes.06G007150 Manihot esculenta HOM05D005158 ORTHO05D005510 1.6e-07 60.1 96 39.6
PRCOL_00003969 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 2.8e-07 59.3 62 48.4
Cpa.g.sc130.33 Carica papaya HOM05D005158 ORTHO05D005510 1.1e-06 57.4 64 50.0
Aqoxy2G01678 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 1.4e-06 57.0 38 57.9


User provided reference genes

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