Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.005G125500 Gossypium raimondii HOM05D007459 ORTHO05D009234 1.6e-89 332.8 176 100.0
Gohir.D02G110600 Gossypium hirsutum HOM05D007459 ORTHO05D009234 4.7e-89 331.3 176 99.4
Gohir.A02G092500 Gossypium hirsutum HOM05D007459 ORTHO05D009234 9.7e-87 323.6 176 96.6
Duzib151G0483 Durio zibethinus HOM05D007459 ORTHO05D009234 4.1e-69 265.0 174 78.7
Thecc.04G171000 Theobroma cacao HOM05D007459 ORTHO05D009234 4.2e-66 255.0 176 76.1
COL.COLO4_28394 Corchorus olitorius HOM05D007459 ORTHO05D009234 7.8e-60 234.2 177 72.9
QL10p052586 Quercus lobata HOM05D007459 ORTHO05D009234 4.6e-52 208.4 174 60.9
CiPaw.01G173000 Carya illinoinensis HOM05D007459 ORTHO05D009234 1.5e-50 203.4 175 61.1
Haze_01404 Corylus avellana HOM05D007459 ORTHO05D009234 8.0e-49 197.6 176 63.1
Cfa015229 Carpinus fangiana HOM05D007459 ORTHO05D009234 5.2e-48 194.9 176 61.9
Haze_01410 Corylus avellana HOM05D007459 ORTHO05D009234 6.8e-48 194.5 176 62.5
Ciclev10022478m.g Citrus clementina HOM05D007459 ORTHO05D009234 2.6e-47 192.6 180 59.4
MD04G1047100 Malus domestica HOM05D007459 ORTHO05D009234 3.7e-46 188.7 176 61.4
CANSAT56G1213 Cannabis sativa HOM05D007459 ORTHO05D009234 8.3e-46 187.6 173 59.5
Prupe.1G201700 Prunus persica HOM05D007459 ORTHO05D009234 8.3e-46 187.6 176 60.2
Atru.chr4.1350 Acer truncatum HOM05D007459 ORTHO05D009234 1.1e-45 187.2 174 59.8
Dinv44169 Davidia involucrata HOM05D007459 ORTHO05D009234 3.2e-45 185.7 170 60.6
Manes.04G050800 Manihot esculenta HOM05D007459 ORTHO05D009234 3.2e-45 185.7 176 55.1
Potri.007G134400 Populus trichocarpa HOM05D007459 ORTHO05D009234 3.2e-45 185.7 178 57.9
Lj6A129T18 Lonicera japonica HOM05D007459 ORTHO05D009234 4.1e-45 185.3 169 56.8
MELO3C017778.2 Cucumis melo HOM05D007459 ORTHO05D009234 9.2e-45 184.1 171 59.6
PGR142G0909 Punica granatum HOM05D007459 ORTHO05D009234 9.2e-45 184.1 179 59.2
Duzib151G0582 Durio zibethinus HOM05D007459 ORTHO05D009234 2.0e-44 183.0 127 70.1
Hma1.2p1_2359F.1_g320593 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 2.7e-44 182.6 172 59.3
Sabra07G0109100 Salix brachista HOM05D007459 ORTHO05D009234 2.7e-44 182.6 178 57.9
Thhalv10001662m.g Eutrema salsugineum HOM05D007459 ORTHO05D009234 6.0e-44 181.4 174 56.3
Hma1.2p1_0554F.1_g177940 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 3.9e-43 178.7 172 58.1
AL4G42340 Arabidopsis lyrata HOM05D007459 ORTHO05D009234 5.0e-43 178.3 174 56.3
Carub.0004s2600 Capsella rubella HOM05D007459 ORTHO05D009234 1.9e-42 176.4 174 53.4
RcHm_v2.0_Chr2g0138101 Rosa chinensis HOM05D007459 ORTHO05D009234 1.9e-42 176.4 174 56.9
TWI38G0757 Tripterygium wilfordii HOM05D007459 ORTHO05D009234 2.5e-42 176.0 157 61.8
CsaV3_4G002640 Cucumis sativus L. HOM05D007459 ORTHO05D009234 3.3e-42 175.6 169 58.6
CSS0017730 Camellia sinensis var. sinensis HOM05D007459 ORTHO05D009234 4.3e-42 175.3 173 56.1
Sp4g25650 Schrenkiella parvula HOM05D007459 ORTHO05D009234 5.6e-42 174.9 175 56.0
CARHR138660 Cardamine hirsuta HOM05D007459 ORTHO05D009234 9.5e-42 174.1 174 55.7
C04p70510 Brassica napus HOM05D007459 ORTHO05D009234 2.8e-41 172.6 174 55.2
THA.LOC104805901 Tarenaya hassleriana HOM05D007459 ORTHO05D009234 3.6e-41 172.2 178 54.5
Solyc06g073170.1 Solanum lycopersicum HOM05D007459 ORTHO05D009234 4.7e-41 171.8 169 55.6
Nitab4.5_0013525g0010 Nicotiana tabacum HOM05D007459 ORTHO05D009234 6.2e-41 171.4 171 55.6
Lalb_Chr22g0352011 Lupinus albus HOM05D007459 ORTHO05D009234 8.1e-41 171.0 176 56.8
Sopen06g029540 Solanum pennellii HOM05D007459 ORTHO05D009234 1.4e-40 170.2 169 55.0
AT2G43540 Arabidopsis thaliana HOM05D007459 ORTHO05D009234 2.3e-40 169.5 174 54.0
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 3.1e-40 169.1 167 54.5
A04p32820 Brassica napus HOM05D007459 ORTHO05D009234 3.1e-40 169.1 174 53.4
BraA04t18744Z Brassica rapa HOM05D007459 ORTHO05D009234 3.1e-40 169.1 174 53.4
Nitab4.5_0002553g0080 Nicotiana tabacum HOM05D007459 ORTHO05D009234 3.1e-40 169.1 169 55.0
PGSC0003DMG400027018 Solanum tuberosum HOM05D007459 ORTHO05D009234 3.1e-40 169.1 169 55.0
FvH4_6g31340 Fragaria vesca HOM05D007459 ORTHO05D009234 4.0e-40 168.7 173 56.1
FAN14G2685 Fragaria x ananassa HOM05D007459 ORTHO05D009234 4.0e-40 168.7 173 56.1
Peaxi162Scf00180g00063 Petunia axillaris HOM05D007459 ORTHO05D009234 4.0e-40 168.7 170 55.3
BcaC02g07169 Brassica carinata HOM05D007459 ORTHO05D009234 5.2e-40 168.3 174 53.4
BcaC02g07170 Brassica carinata HOM05D007459 ORTHO05D009234 5.2e-40 168.3 174 53.4
BolC4t28553H Brassica oleracea HOM05D007459 ORTHO05D009234 5.2e-40 168.3 174 53.4
Nn1g09730 Nelumbo nucifera HOM05D007459 ORTHO05D009234 6.8e-40 167.9 169 54.4
BcaB06g29324 Brassica carinata HOM05D007459 ORTHO05D009234 8.9e-40 167.5 174 52.9
vmacro06567 Vaccinium macrocarpon HOM05D007459 ORTHO05D009234 2.0e-39 166.4 175 53.1
FAN05G5726 Fragaria x ananassa HOM05D007459 ORTHO05D009234 2.6e-39 166.0 173 54.9
Cc03_g12180 Coffea canephora HOM05D007459 ORTHO05D009234 3.4e-39 165.6 175 53.1
Haze_01399 Corylus avellana HOM05D007459 ORTHO05D009234 5.8e-39 164.9 163 55.8
Sed0000488 Sechium edule HOM05D007459 ORTHO05D009234 5.8e-39 164.9 176 55.1
C04p70520 Brassica napus HOM05D007459 ORTHO05D009234 2.2e-38 162.9 162 53.7
BolC4t28554H Brassica oleracea HOM05D007459 ORTHO05D009234 2.2e-38 162.9 162 53.7
TAR362G1157 Trochodendron aralioides HOM05D007459 ORTHO05D009234 2.2e-38 162.9 171 53.8
Lj3g0013618 Lotus japonicus HOM05D007459 ORTHO05D009234 8.3e-38 161.0 171 55.0
Ca_01236_v3 Cicer arietinum L. HOM05D007459 ORTHO05D009234 2.7e-36 156.0 177 53.1
TPR.G6565 Trifolium pratense HOM05D007459 ORTHO05D009234 7.8e-36 154.5 175 51.4
SGA_v2.0_scaffold25G10994 Striga asiatica HOM05D007459 ORTHO05D009234 1.7e-35 153.3 168 52.4
TPR.G13012 Trifolium pratense HOM05D007459 ORTHO05D009234 3.0e-35 152.5 176 51.1
Medtr2g099440 Medicago truncatula HOM05D007459 ORTHO05D009234 3.9e-35 152.1 171 51.5
Rhsim09G0013300 Rhododendron simsii HOM05D007459 ORTHO05D009234 8.6e-35 151.0 173 49.1
Lsat_1_v5_gn_8_158021 Lactuca sativa HOM05D007459 ORTHO05D009234 2.5e-34 149.4 171 50.3
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 2.1e-33 146.4 146 53.4
Psat5g291760 Pisum sativum HOM05D007459 ORTHO05D009234 4.7e-33 145.2 171 51.5
Phvul.005G155700 Phaseolus vulgaris HOM05D007459 ORTHO05D009234 6.2e-33 144.8 176 47.7
HanXRQChr14g0433791 Helianthus annuus HOM05D007459 ORTHO05D009234 8.1e-33 144.4 174 48.9
unitig_85.g27223 Utricularia gibba HOM05D007459 ORTHO05D009234 5.2e-32 141.7 168 51.2
Sc06g0007410 Simmondsia chinensis HOM05D007459 ORTHO05D009234 8.9e-32 141.0 176 49.4
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 3.4e-31 139.0 161 50.9
Migut.N03078 Erythranthe guttata HOM05D007459 ORTHO05D009234 2.2e-30 136.3 170 51.2
DCAR_028411 Daucus carota HOM05D007459 ORTHO05D009234 2.4e-29 132.9 170 45.9
EL10Ac3g06032 Beta vulgaris HOM05D007459 ORTHO05D009234 2.1e-28 129.8 174 45.4
Glyma.13G346600 Glycine max HOM05D007459 ORTHO05D009234 2.1e-28 129.8 171 47.4
Os04g0495300 Oryza sativa ssp. japonica HOM05D007459 ORTHO05D009234 5.1e-27 125.2 166 44.0
AUR62002368 Chenopodium quinoa HOM05D007459 ORTHO05D009234 1.5e-26 123.6 174 44.8
AUR62023818 Chenopodium quinoa HOM05D007459 ORTHO05D009234 4.3e-26 122.1 174 45.4
Actinidia27099 Actinidia chinensis HOM05D007459 ORTHO05D009234 9.6e-26 120.9 140 49.3
ATR0743G068 Amborella trichopoda HOM05D007459 ORTHO05D009234 9.6e-26 120.9 170 44.7
ClCG07G015090 Citrullus lanatus HOM05D007459 ORTHO05D009234 2.8e-25 119.4 176 45.5
HPP92_004524 Vanilla planifolia HOM05D007459 ORTHO05D009234 4.7e-25 118.6 173 43.9
Eucgr.L02147 Eucalyptus grandis HOM05D007459 ORTHO05D009234 8.1e-25 117.9 154 48.1
Zm00001eb078650 Zea mays HOM05D007459 ORTHO05D009234 3.4e-23 112.5 173 45.1
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 7.1e-21 104.8 139 43.2
Ah.07g202500 Amaranthus hybridus HOM05D007459 ORTHO05D009234 1.2e-20 104.0 174 40.2
EL10Ac9g22812 Beta vulgaris HOM05D007459 ORTHO05D009234 2.1e-20 103.2 154 44.2
HPP92_004533 Vanilla planifolia HOM05D007459 ORTHO05D009234 9.6e-18 94.4 136 44.1
EL10Ac5g11171 Beta vulgaris HOM05D007459 ORTHO05D009234 3.6e-17 92.4 135 43.7
EL10Ac4g10228 Beta vulgaris HOM05D007459 ORTHO05D009234 1.1e-16 90.9 134 41.0
EL10Ac6g13927 Beta vulgaris HOM05D000045 ORTHO05D010054 1.3e-11 73.9 68 63.2
Pp3c17_9330 Physcomitrium patens HOM05D007459 ORTHO05D009234 5.6e-10 68.6 141 30.5
EL10Ac3g06136 Beta vulgaris HOM05D007459 ORTHO05D009234 2.1e-09 66.6 90 46.7
Pp3c3_12780 Physcomitrium patens HOM05D007459 ORTHO05D009234 1.4e-08 63.9 149 28.9
Mapoly0038s0008 Marchantia polymorpha HOM05D007459 ORTHO05D009234 2.4e-08 63.2 145 31.0
ECA238G4467 Erigeron canadensis HOM05D007459 ORTHO05D009234 4.0e-08 62.4 76 48.7
SEGI_40343 Sequoiadendron giganteum HOM05D007459 ORTHO05D009234 7.6e-07 58.2 137 29.9


User provided reference genes

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