Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.005G104100 Gossypium raimondii HOM05D001560 ORTHO05D003613 1.1e-176 623.2 317 100.0
COL.COLO4_04089 Corchorus olitorius HOM05D001560 ORTHO05D003613 1.3e-153 546.6 323 87.3
CANSAT16G0039 Cannabis sativa HOM05D001560 ORTHO05D003613 3.2e-149 531.9 324 86.4
Nn1g10043 Nelumbo nucifera HOM05D001560 ORTHO05D003613 2.8e-145 518.8 322 84.5
Nn4g26006 Nelumbo nucifera HOM05D001560 ORTHO05D003613 2.8e-145 518.8 322 84.5
ClCG10G004690 Citrullus lanatus HOM05D001560 ORTHO05D003613 6.3e-145 517.7 323 83.9
Sed0013276 Sechium edule HOM05D001560 ORTHO05D003613 1.4e-144 516.5 323 83.9
Hma1.2p1_0261F.1_g105120 Hydrangea macrophylla HOM05D001560 ORTHO05D003613 3.1e-144 515.4 323 83.6
Lj2C1229T3 Lonicera japonica HOM05D001560 ORTHO05D003613 5.4e-144 514.6 323 83.3
ATMG00520 Arabidopsis thaliana HOM05D001560 ORTHO05D003613 1.2e-143 513.5 323 83.3
BolSC28t60329H Brassica oleracea HOM05D001560 ORTHO05D003613 2.9e-142 508.8 324 83.3
BraSC77t46661Z Brassica rapa HOM05D001560 ORTHO05D003613 2.9e-142 508.8 324 83.3
CARHR282880 Cardamine hirsuta HOM05D001560 ORTHO05D003613 2.9e-142 508.8 323 83.0
Sp3g25920 Schrenkiella parvula HOM05D001560 ORTHO05D003613 2.9e-142 508.8 324 83.3
Actinidia34853 Actinidia chinensis HOM05D001560 ORTHO05D003613 8.5e-142 507.3 322 82.6
Sc04g0005570 Simmondsia chinensis HOM05D001560 ORTHO05D003613 1.1e-141 506.9 323 83.0
RhsimMtG0005500 Rhododendron simsii HOM05D001560 ORTHO05D003613 5.5e-141 504.6 323 82.7
AUR62042345 Chenopodium quinoa HOM05D001560 ORTHO05D003613 8.0e-140 500.7 323 81.7
DCAR_032442 Daucus carota HOM05D001560 ORTHO05D003613 8.0e-140 500.7 323 81.7
LjContig00315g0001212 Lotus japonicus HOM05D001560 ORTHO05D003613 8.0e-140 500.7 325 81.5
PGR028G0023 Punica granatum HOM05D001560 ORTHO05D003613 3.0e-139 498.8 323 81.7
PGR071G0003 Punica granatum HOM05D001560 ORTHO05D003613 3.0e-139 498.8 323 81.7
HanXRQMTg0579631 Helianthus annuus HOM05D001560 ORTHO05D003613 7.5e-138 494.2 323 80.8
Lalb_Chr00c21g0406061 Lupinus albus HOM05D001560 ORTHO05D003613 1.3e-137 493.4 327 81.0
Lalb_Chr00c39g0409051 Lupinus albus HOM05D001560 ORTHO05D003613 1.3e-137 493.4 327 81.0
Lalb_Chr00c39g0409231 Lupinus albus HOM05D001560 ORTHO05D003613 1.3e-137 493.4 327 81.0
Lalb_Chr00c51g0413141 Lupinus albus HOM05D001560 ORTHO05D003613 1.3e-137 493.4 327 81.0
CAN.G1180.6 Capsicum annuum HOM05D001560 ORTHO05D003613 8.3e-137 490.7 323 80.2
arahy.Tifrunner.gnm1.ann1.7G246T Arachis hypogaea HOM05D001560 ORTHO05D003613 3.1e-136 488.8 324 80.9
arahy.Tifrunner.gnm1.ann1.JTWL6Q Arachis hypogaea HOM05D001560 ORTHO05D003613 3.1e-136 488.8 324 80.9
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 2.7e-135 485.7 323 80.5
Ah.10g028460 Amaranthus hybridus HOM05D001560 ORTHO05D003613 5.0e-134 481.5 322 78.3
Hund27586 Selenicereus undatus HOM05D001560 ORTHO05D003613 8.9e-131 470.7 323 78.6
Hund27816 Selenicereus undatus HOM05D001560 ORTHO05D003613 8.9e-131 470.7 323 78.6
Hund27900 Selenicereus undatus HOM05D001560 ORTHO05D003613 8.9e-131 470.7 323 78.6
Hund28069 Selenicereus undatus HOM05D001560 ORTHO05D003613 8.9e-131 470.7 323 78.6
Hund28082 Selenicereus undatus HOM05D001560 ORTHO05D003613 8.9e-131 470.7 323 78.6
Hund28866 Selenicereus undatus HOM05D001560 ORTHO05D003613 8.9e-131 470.7 323 78.6
Hund28883 Selenicereus undatus HOM05D001560 ORTHO05D003613 8.9e-131 470.7 323 78.6
Hund29205 Selenicereus undatus HOM05D001560 ORTHO05D003613 8.9e-131 470.7 323 78.6
SabraMtG0009600 Salix brachista HOM05D001560 ORTHO05D003613 2.0e-130 469.5 322 79.8
AL3G44410 Arabidopsis lyrata HOM05D001560 ORTHO05D003613 2.0e-127 459.5 285 85.6
CDE02G0303 Ceratophyllum demersum HOM05D001560 ORTHO05D003613 1.1e-125 453.8 329 75.1
Nn1g09975 Nelumbo nucifera HOM05D001560 ORTHO05D003613 2.3e-123 446.0 282 83.3
Sed0003843 Sechium edule HOM05D001560 ORTHO05D003613 5.8e-122 441.4 311 76.2
Dinv06700 Davidia involucrata HOM05D001560 ORTHO05D003613 1.7e-121 439.9 309 76.1
SHI45575 Sapria himalayana HOM05D001560 ORTHO05D003613 2.3e-118 429.5 320 75.0
Cpa.g.sc89.22 Carica papaya HOM05D001560 ORTHO05D003613 4.3e-117 425.2 267 85.0
SHI38463 Sapria himalayana HOM05D001560 ORTHO05D003613 3.6e-116 422.2 320 72.2
HanXRQChr10g0297191 Helianthus annuus HOM05D001560 ORTHO05D003613 4.1e-112 408.7 298 74.5
Ca_14833_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 9.2e-112 407.5 269 81.0
Ca_22165_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 9.2e-112 407.5 269 81.0
Hund12886 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.6e-111 405.2 322 70.5
SHI35000 Sapria himalayana HOM05D001560 ORTHO05D003613 2.3e-110 402.9 319 70.5
Lsat_1_v5_gn_3_89520 Lactuca sativa HOM05D001560 ORTHO05D003613 4.3e-109 398.7 309 70.2
CsaV3_UNG210420 Cucumis sativus L. HOM05D001560 ORTHO05D003613 1.3e-105 387.1 294 72.4
Potri.007G062302 Populus trichocarpa HOM05D001560 ORTHO05D003613 2.2e-105 386.3 267 79.8
Sopen11g018210 Solanum pennellii HOM05D001560 ORTHO05D003613 4.9e-105 385.2 267 77.9
Lsat_1_v5_gn_5_16600 Lactuca sativa HOM05D001560 ORTHO05D003613 1.2e-103 380.6 329 66.6
SHI38584 Sapria himalayana HOM05D001560 ORTHO05D003613 2.7e-103 379.4 284 74.3
SHI38561 Sapria himalayana HOM05D001560 ORTHO05D003613 5.1e-102 375.2 284 73.6
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 3.3e-101 372.5 307 66.8
Hund12883 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.4e-99 367.1 257 77.8
unitig_87.g27957 Utricularia gibba HOM05D001560 ORTHO05D003613 5.8e-98 361.7 261 77.4
HanXRQChr09g0251121 Helianthus annuus HOM05D001560 ORTHO05D003613 1.7e-97 360.1 257 75.9
Hund29084 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.9e-97 359.4 247 78.9
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 5.4e-96 355.1 293 68.9
ClCG06G008570 Citrullus lanatus HOM05D001560 ORTHO05D003613 6.0e-95 351.7 295 67.5
CSS0047048 Camellia sinensis var. sinensis HOM05D001560 ORTHO05D003613 7.3e-93 344.7 308 63.6
HanXRQChr01g0012841 Helianthus annuus HOM05D001560 ORTHO05D003613 3.1e-91 339.3 262 71.8
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 5.3e-91 338.6 308 62.3
SHI49510 Sapria himalayana HOM05D001560 ORTHO05D003613 2.2e-89 333.2 300 63.7
arahy.Tifrunner.gnm1.ann1.K9CWE8 Arachis hypogaea HOM05D001560 ORTHO05D003613 8.7e-86 321.2 266 68.8
Nn4g26009 Nelumbo nucifera HOM05D001560 ORTHO05D003613 4.8e-84 315.5 193 85.5
SHI36372 Sapria himalayana HOM05D001560 ORTHO05D003613 4.8e-84 315.5 237 75.9
TPR.G162 Trifolium pratense HOM05D001560 ORTHO05D003613 1.8e-83 313.5 208 80.8
SHI36625 Sapria himalayana HOM05D001560 ORTHO05D003613 1.3e-81 307.4 234 71.8
SHI35327 Sapria himalayana HOM05D001560 ORTHO05D003613 5.5e-80 302.0 242 71.5
SHI36270 Sapria himalayana HOM05D001560 ORTHO05D003613 1.6e-79 300.4 313 57.5
SHI38843 Sapria himalayana HOM05D001560 ORTHO05D003613 6.7e-78 295.0 213 75.6
AUR62038665 Chenopodium quinoa HOM05D001560 ORTHO05D003613 1.2e-74 284.3 181 82.3
CAN.G745.35 Capsicum annuum HOM05D001560 ORTHO05D003613 1.7e-73 280.4 208 74.0
SHI34996 Sapria himalayana HOM05D001560 ORTHO05D003613 1.7e-73 280.4 307 56.4
SHI36584 Sapria himalayana HOM05D001560 ORTHO05D003613 1.3e-70 270.8 264 62.5
Lsat_1_v5_gn_4_121001 Lactuca sativa HOM05D001560 ORTHO05D003613 1.1e-69 267.7 178 82.0
Nitab4.5_0000886g0180 Nicotiana tabacum HOM05D001560 ORTHO05D003613 1.1e-69 267.7 321 51.1
Nitab4.5_0001152g0950 Nicotiana tabacum HOM05D001560 ORTHO05D003613 8.2e-68 261.5 307 53.7
Solyc11g030890.3 Solanum lycopersicum HOM05D001560 ORTHO05D003613 1.2e-58 231.1 182 69.8
Peaxi162Scf00348g00514 Petunia axillaris HOM05D001560 ORTHO05D003613 1.4e-56 224.2 156 76.9
Hund29341 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.4e-56 224.2 165 76.4
BolSC28t60405H Brassica oleracea HOM05D001560 ORTHO05D003613 2.5e-56 223.4 129 87.6
BolSC28t60433H Brassica oleracea HOM05D001560 ORTHO05D003613 2.5e-56 223.4 129 87.6
CAN.G1321.15 Capsicum annuum HOM05D001560 ORTHO05D003613 2.5e-56 223.4 158 75.9
Hma1.2p1_0079F.1_g041900 Hydrangea macrophylla HOM05D001560 ORTHO05D003613 2.5e-56 223.4 137 83.9
Nitab4.5_0000307g0340 Nicotiana tabacum HOM05D001560 ORTHO05D003613 9.4e-56 221.5 213 61.0
ATR0693G347 Amborella trichopoda HOM05D001560 ORTHO05D003613 2.3e-54 216.9 170 69.4
Solyc09g056070.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 1.5e-53 214.2 219 58.4
Peaxi162Scf00622g00016 Petunia axillaris HOM05D001560 ORTHO05D003613 4.1e-51 206.1 157 69.4
SHI36381 Sapria himalayana HOM05D001560 ORTHO05D003613 2.2e-49 200.3 318 45.3
SHI40317 Sapria himalayana HOM05D001560 ORTHO05D003613 2.9e-49 199.9 290 47.2
CAN.G85.15 Capsicum annuum HOM05D001560 ORTHO05D003613 8.5e-49 198.4 223 51.1
ClCG10G004710 Citrullus lanatus HOM05D001560 ORTHO05D003613 2.3e-46 190.3 161 65.2
CAN.G497.19 Capsicum annuum HOM05D001560 ORTHO05D003613 2.0e-45 187.2 116 83.6
SHI46061 Sapria himalayana HOM05D001560 ORTHO05D003613 1.3e-44 184.5 154 64.9
TWI75G1342 Tripterygium wilfordii HOM05D001560 ORTHO05D003613 7.0e-43 178.7 105 85.7
SHI37900 Sapria himalayana HOM05D001560 ORTHO05D003613 3.5e-42 176.4 291 44.0
Nitab4.5_0002739g0180 Nicotiana tabacum HOM05D001560 ORTHO05D003613 5.0e-41 172.6 129 75.2
Nn4g26010 Nelumbo nucifera HOM05D001560 ORTHO05D003613 3.6e-39 166.4 105 81.0
Peaxi162Scf00348g00515 Petunia axillaris HOM05D001560 ORTHO05D003613 1.0e-38 164.9 103 77.7
BraSC48t46281Z Brassica rapa HOM05D001560 ORTHO05D003613 3.3e-37 159.8 106 79.2
HanXRQChr13g0415511 Helianthus annuus HOM05D001560 ORTHO05D003613 2.2e-36 157.1 105 76.2
Peaxi162Scf00931g00038 Petunia axillaris HOM05D001560 ORTHO05D003613 6.3e-36 155.6 139 66.9
PSO675G8388 Papaver somniferum HOM05D001560 ORTHO05D003613 8.2e-36 155.2 129 66.7
C01p34990 Brassica napus HOM05D001560 ORTHO05D003613 1.4e-35 154.5 120 69.2
SHI34605 Sapria himalayana HOM05D001560 ORTHO05D003613 7.7e-34 148.7 308 38.3
Sopen09g021510 Solanum pennellii HOM05D001560 ORTHO05D013554 1.0e-33 148.3 102 76.5
HanXRQChr08g0236181 Helianthus annuus HOM05D001560 ORTHO05D003613 2.2e-33 147.1 93 77.4
Psat1g001600 Pisum sativum HOM05D001560 ORTHO05D003613 2.9e-33 146.7 88 86.4
SHI43894 Sapria himalayana HOM05D001560 ORTHO05D003613 3.8e-33 146.4 308 38.6
Ca_14832_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 1.4e-30 137.9 99 72.7
Ca_22164_v3 Cicer arietinum L. HOM05D001560 ORTHO05D010874 1.4e-30 137.9 99 72.7
SHI27345 Sapria himalayana HOM05D001560 ORTHO05D003613 2.0e-29 134.0 100 71.0
Rhsim07G0227200 Rhododendron simsii HOM05D000187 ORTHO05D000230 7.5e-29 132.1 78 84.6
SHI54049 Sapria himalayana HOM05D001560 ORTHO05D003613 2.3e-25 120.6 103 66.0
Solyc03g013220.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 3.8e-25 119.8 110 66.4
SHI36773 Sapria himalayana HOM05D001560 ORTHO05D010994 3.2e-24 116.7 96 65.6
SHI36784 Sapria himalayana HOM05D001560 ORTHO05D010994 3.2e-24 116.7 96 65.6
SEGI_16710 Sequoiadendron giganteum HOM05D001560 ORTHO05D003613 9.5e-24 115.2 152 53.3
SEGI_26668 Sequoiadendron giganteum HOM05D001560 ORTHO05D003613 3.6e-23 113.2 152 52.6
CARHR287190 Cardamine hirsuta HOM05D001560 ORTHO05D003613 1.0e-22 111.7 67 86.6
Nitab4.5_0000307g0350 Nicotiana tabacum HOM05D001560 ORTHO05D003613 6.8e-22 109.0 105 58.1
SHI34636 Sapria himalayana HOM05D001560 ORTHO05D003613 7.5e-21 105.5 79 75.9
SHI37382 Sapria himalayana HOM05D001560 ORTHO05D003613 1.3e-20 104.8 105 60.0
SHI38532 Sapria himalayana HOM05D001560 ORTHO05D003613 3.7e-20 103.2 107 61.7
SHI35186 Sapria himalayana HOM05D000743 ORTHO05D000580 8.3e-20 102.1 73 65.8
GSVIVG01000512001 Vitis vinifera HOM05D001560 ORTHO05D003613 8.3e-20 102.1 60 80.0
SHI37855 Sapria himalayana HOM05D001560 ORTHO05D003613 5.4e-19 99.4 70 77.1
Ca_22176_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 5.9e-18 95.9 64 75.0
Solyc11g030880.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 1.1e-16 91.7 58 70.7
TPR.G33338 Trifolium pratense HOM05D001560 ORTHO05D003613 4.0e-14 83.2 77 61.0
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 9.8e-13 78.6 54 72.2
SHI44984 Sapria himalayana HOM05D001560 ORTHO05D003613 9.8e-13 78.6 240 34.6
Oeu048658.1 Olea europaea HOM05D001560 ORTHO05D003613 4.1e-11 73.2 47 80.9
Sopen11g021670 Solanum pennellii HOM05D001560 ORTHO05D003613 4.1e-11 73.2 52 71.2
SHI34998 Sapria himalayana HOM05D001560 ORTHO05D003613 9.2e-11 72.0 57 63.2
Nitab4.5_0001781g0110 Nicotiana tabacum HOM05D001560 ORTHO05D010811 1.6e-10 71.2 42 88.1
SHI37067 Sapria himalayana HOM05D001560 ORTHO05D010994 7.8e-10 68.9 40 77.5
BcaC01g01473 Brassica carinata HOM05D001560 ORTHO05D003613 3.6e-07 60.1 34 76.5
C03p92380 Brassica napus HOM05D001560 ORTHO05D003613 3.6e-07 60.1 34 76.5


User provided reference genes

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