Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.005G103500 Gossypium raimondii HOM05D006157 ORTHO05D007826 1.6e-154 549.3 266 100.0
Gohir.D02G092100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 1.4e-153 546.2 266 99.6
Gohir.A03G079324 Gossypium hirsutum HOM05D006157 ORTHO05D007826 4.6e-149 531.2 266 96.2
Duzib116G0710 Durio zibethinus HOM05D006157 ORTHO05D007826 4.3e-86 322.0 219 74.4
Gorai.010G017900 Gossypium raimondii HOM05D006157 ORTHO05D007826 9.2e-73 277.7 208 67.3
Gohir.D06G015100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 3.5e-72 275.8 208 66.8
Gohir.A06G017000 Gossypium hirsutum HOM05D006157 ORTHO05D007826 7.8e-72 274.6 208 66.8
Ciclev10002442m.g Citrus clementina HOM05D006157 ORTHO05D007826 5.6e-62 241.9 209 60.3
Haze_17545 Corylus avellana HOM05D006157 ORTHO05D007826 4.8e-61 238.8 210 57.6
Haze_17554 Corylus avellana HOM05D006157 ORTHO05D007826 4.8e-61 238.8 210 57.6
Cfa018525 Carpinus fangiana HOM05D006157 ORTHO05D007826 8.1e-61 238.0 210 57.6
Potri.002G127800 Populus trichocarpa HOM05D006157 ORTHO05D007826 9.0e-60 234.6 212 55.2
Thecc.08G011200 Theobroma cacao HOM05D006157 ORTHO05D007826 2.0e-59 233.4 154 72.1
QL02p005407 Quercus lobata HOM05D006157 ORTHO05D007826 1.3e-58 230.7 209 57.4
Atru.chr13.647 Acer truncatum HOM05D006157 ORTHO05D007826 2.7e-56 223.0 223 54.7
CiPaw.15G061800 Carya illinoinensis HOM05D006157 ORTHO05D007826 2.3e-55 219.9 215 55.3
Sabra14G0022700 Salix brachista HOM05D006157 ORTHO05D007826 3.9e-55 219.2 212 52.4
TWI56G1258 Tripterygium wilfordii HOM05D006157 ORTHO05D007826 1.9e-54 216.9 210 52.9
Potri.014G032300 Populus trichocarpa HOM05D006157 ORTHO05D007826 5.6e-54 215.3 213 52.1
Ca_13302_v3 Cicer arietinum L. HOM05D006157 ORTHO05D007826 2.6e-51 206.5 207 52.7
Actinidia23263 Actinidia chinensis HOM05D006157 ORTHO05D007826 4.5e-51 205.7 232 50.4
Medtr1g019800 Medicago truncatula HOM05D006157 ORTHO05D007826 1.3e-50 204.1 208 51.9
Prupe.1G438800 Prunus persica HOM05D006157 ORTHO05D007826 2.2e-50 203.4 212 53.3
MELO3C010885.2 Cucumis melo HOM05D006157 ORTHO05D007826 2.9e-50 203.0 208 51.4
TPR.G13684 Trifolium pratense HOM05D006157 ORTHO05D007826 2.4e-49 199.9 209 52.2
Hma1.2p1_0718F.1_g208450 Hydrangea macrophylla HOM05D006157 ORTHO05D007826 3.2e-49 199.5 210 52.9
CsaV3_2G028070 Cucumis sativus L. HOM05D006157 ORTHO05D007826 9.3e-49 198.0 208 50.0
Psat6g012720 Pisum sativum HOM05D006157 ORTHO05D007826 1.2e-48 197.6 208 51.0
Sed0015883 Sechium edule HOM05D006157 ORTHO05D007826 1.2e-48 197.6 209 47.4
Sed0006561 Sechium edule HOM05D006157 ORTHO05D007826 2.1e-48 196.8 208 48.1
CANSAT54G0006 Cannabis sativa HOM05D006157 ORTHO05D007826 3.5e-48 196.1 208 51.9
Cpa.g.c24415.4 Carica papaya HOM05D006157 ORTHO05D007826 3.5e-48 196.1 202 52.5
RcHm_v2.0_Chr6g0307431 Rosa chinensis HOM05D006157 ORTHO05D007826 6.0e-48 195.3 214 52.3
Manes.18G032700 Manihot esculenta HOM05D006157 ORTHO05D007826 3.0e-47 193.0 209 49.3
Eucgr.F00242 Eucalyptus grandis HOM05D006157 ORTHO05D007826 5.1e-47 192.2 209 50.7
FAN15G3536 Fragaria x ananassa HOM05D006157 ORTHO05D007826 6.7e-47 191.8 259 44.8
Lj5g0002869 Lotus japonicus HOM05D006157 ORTHO05D007826 2.5e-46 189.9 211 47.9
MD15G1085000 Malus domestica HOM05D006157 ORTHO05D007826 3.3e-46 189.5 209 50.2
CSS0004131 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 3.7e-45 186.0 217 44.7
Manes.05G171900 Manihot esculenta HOM05D006157 ORTHO05D007826 6.2e-45 185.3 209 48.8
Manes.05G171901 Manihot esculenta HOM05D006157 ORTHO05D007826 6.2e-45 185.3 209 48.8
ClCG08G015710 Citrullus lanatus HOM05D006157 ORTHO05D007826 1.8e-44 183.7 199 50.3
THA.LOC104806945 Tarenaya hassleriana HOM05D006157 ORTHO05D007826 1.8e-44 183.7 196 46.9
Dinv35975 Davidia involucrata HOM05D006157 ORTHO05D007826 4.0e-44 182.6 213 49.8
Peaxi162Scf00064g00125 Petunia axillaris HOM05D006157 ORTHO05D007826 4.0e-44 182.6 230 43.5
vmacro21540 Vaccinium macrocarpon HOM05D006157 ORTHO05D007826 6.9e-44 181.8 208 48.1
FAN20G0621 Fragaria x ananassa HOM05D006157 ORTHO05D007826 5.8e-43 178.7 262 43.1
Lalb_Chr14g0368791 Lupinus albus HOM05D006157 ORTHO05D007826 5.8e-43 178.7 202 47.0
Glyma.04G037500 Glycine max HOM05D006157 ORTHO05D007826 1.0e-42 177.9 209 45.0
Phvul.009G063700 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 4.9e-42 175.6 205 44.4
Glyma.17G243500 Glycine max HOM05D006157 ORTHO05D007826 1.1e-41 174.5 210 49.5
FvH4_2g34660 Fragaria vesca HOM05D006157 ORTHO05D007826 1.4e-41 174.1 216 47.7
Phvul.001G020800 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 1.4e-41 174.1 204 49.0
PGR083G2028 Punica granatum HOM05D006157 ORTHO05D007826 1.4e-41 174.1 211 46.0
MD08G1103700 Malus domestica HOM05D006157 ORTHO05D007826 7.1e-41 171.8 211 46.9
TAR628G1181 Trochodendron aralioides HOM05D006157 ORTHO05D007826 7.1e-41 171.8 210 46.7
FAN27G0611 Fragaria x ananassa HOM05D006157 ORTHO05D007826 9.3e-41 171.4 215 48.8
Nn5g30225 Nelumbo nucifera HOM05D006157 ORTHO05D007826 9.3e-41 171.4 210 45.2
Glyma.14G081800 Glycine max HOM05D006157 ORTHO05D007826 1.6e-40 170.6 209 48.3
Nitab4.5_0001101g0070 Nicotiana tabacum HOM05D006157 ORTHO05D007826 2.1e-40 170.2 206 43.7
MSTRG.25101 Avicennia marina HOM05D006157 ORTHO05D007826 2.7e-40 169.9 202 45.5
GSVIVG01009525001 Vitis vinifera HOM05D006157 ORTHO05D007826 3.5e-40 169.5 211 45.5
Nitab4.5_0000686g0050 Nicotiana tabacum HOM05D006157 ORTHO05D007826 4.6e-40 169.1 206 44.7
VMungo0647G0691 Vigna mungo HOM05D006157 ORTHO05D007826 1.0e-39 167.9 204 47.1
VMungo1309G0335 Vigna mungo HOM05D006157 ORTHO05D007826 5.1e-39 165.6 209 43.5
Glyma.06G038400 Glycine max HOM05D006157 ORTHO05D007826 8.7e-39 164.9 205 42.4
PGSC0003DMG400036180 Solanum tuberosum HOM05D006157 ORTHO05D007826 1.9e-38 163.7 207 43.5
Sopen04g032780 Solanum pennellii HOM05D006157 ORTHO05D007826 3.3e-38 162.9 210 44.8
COL.COLO4_26474 Corchorus olitorius HOM05D006157 ORTHO05D007826 2.2e-37 160.2 208 49.5
Nitab4.5_0004184g0060 Nicotiana tabacum HOM05D006157 ORTHO05D007890 3.7e-37 159.5 205 42.0
Cc10_g04340 Coffea canephora HOM05D006157 ORTHO05D007826 8.2e-37 158.3 234 40.6
Duzib093G2157 Durio zibethinus HOM05D006157 ORTHO05D007826 1.4e-36 157.5 95 84.2
Peaxi162Scf00528g00414 Petunia axillaris HOM05D006157 ORTHO05D007826 2.4e-36 156.8 203 40.9
Lj4C53T12 Lonicera japonica HOM05D006157 ORTHO05D007826 3.1e-36 156.4 210 45.7
Nitab4.5_0000453g0220 Nicotiana tabacum HOM05D006157 ORTHO05D007890 9.0e-36 154.8 206 42.2
Rhsim06G0048100 Rhododendron simsii HOM05D006157 ORTHO05D007826 1.2e-35 154.5 209 45.0
EL10Ac1g01781 Beta vulgaris HOM05D006157 ORTHO05D007826 2.6e-35 153.3 224 42.0
AUR62022432 Chenopodium quinoa HOM05D006157 ORTHO05D007826 4.5e-35 152.5 220 41.8
Lsat_1_v5_gn_4_124041 Lactuca sativa HOM05D006157 ORTHO05D007826 5.0e-34 149.1 216 42.1
Nn1g05836 Nelumbo nucifera HOM05D006157 ORTHO05D007826 8.5e-34 148.3 211 42.7
Aa31sc924G20 Aethionema arabicum HOM05D006157 ORTHO05D007826 1.4e-33 147.5 202 42.6
BcaB07g33839 Brassica carinata HOM05D006157 ORTHO05D007826 5.5e-33 145.6 188 43.6
AUR62039307 Chenopodium quinoa HOM05D006157 ORTHO05D007826 2.1e-32 143.7 219 39.7
Solyc04g079170.4 Solanum lycopersicum HOM05D006157 ORTHO05D007826 3.6e-32 142.9 200 43.5
SGA_v2.0_scaffold14G07032 Striga asiatica HOM05D006157 ORTHO05D007826 4.6e-32 142.5 212 42.5
ECA232G2668 Erigeron canadensis HOM05D006157 ORTHO05D007826 1.0e-31 141.4 211 43.1
CARHR037020 Cardamine hirsuta HOM05D006157 ORTHO05D007826 1.4e-31 141.0 186 41.9
A10p06400 Brassica napus HOM05D006157 ORTHO05D007826 1.9e-30 137.1 188 42.0
BolSC99t61279H Brassica oleracea HOM05D006157 ORTHO05D007826 3.3e-30 136.3 186 43.0
HanXRQChr09g0267931 Helianthus annuus HOM05D006157 ORTHO05D007826 1.3e-29 134.4 220 38.2
MBI02_g17343_MAGBIO Magnolia biondii HOM05D006157 ORTHO05D007826 2.2e-29 133.7 203 39.9
C06p01910 Brassica napus HOM05D006157 ORTHO05D007826 2.8e-29 133.3 186 42.5
Sp1g34500 Schrenkiella parvula HOM05D006157 ORTHO05D007826 3.7e-29 132.9 186 40.3
SpUn0102_0020 Schrenkiella parvula HOM05D006157 ORTHO05D007826 3.7e-29 132.9 186 40.3
Carub.0001s3622 Capsella rubella HOM05D006157 ORTHO05D007826 8.2e-29 131.7 187 40.1
Thhalv10011797m.g Eutrema salsugineum HOM05D006157 ORTHO05D007826 8.2e-29 131.7 188 39.4
AL1G53700 Arabidopsis lyrata HOM05D006157 ORTHO05D007826 1.1e-28 131.3 185 41.6
Sopen12g030790 Solanum pennellii HOM05D006157 ORTHO05D007826 1.2e-27 127.9 210 37.6
Aqoxy6G01361 Aquilegia oxysepala HOM05D006157 ORTHO05D007826 4.5e-27 125.9 211 38.9
PGSC0003DMG400015419 Solanum tuberosum HOM05D006157 ORTHO05D007826 4.5e-27 125.9 138 42.8
AT1G47410 Arabidopsis thaliana HOM05D006157 ORTHO05D007826 1.7e-26 124.0 189 39.7
Sc02g0007020 Simmondsia chinensis HOM05D006157 ORTHO05D007826 2.2e-26 123.6 213 39.0
Ah.05g168840 Amaranthus hybridus HOM05D006157 ORTHO05D007826 3.8e-26 122.9 181 42.5
Solyc12g088890.3 Solanum lycopersicum HOM05D006157 ORTHO05D007890 1.4e-25 120.9 175 41.1
Migut.C00597 Erythranthe guttata HOM05D006157 ORTHO05D007826 1.9e-25 120.6 197 42.1
DCAR_011305 Daucus carota HOM05D005231 ORTHO05D006387 2.5e-25 120.2 154 44.2
SalBow8G3379 Salvia bowleyana HOM05D006157 ORTHO05D007826 4.7e-24 115.9 203 40.4
BcaC08g42947 Brassica carinata HOM05D006157 ORTHO05D007826 6.1e-24 115.5 183 38.3
AUR62019555 Chenopodium quinoa HOM05D006157 ORTHO05D007826 3.0e-23 113.2 157 43.3
PSO541G3363 Papaver somniferum HOM05D006157 ORTHO05D007826 8.8e-23 111.7 223 34.1
Migut.N02699 Erythranthe guttata HOM05D006157 ORTHO05D007826 5.7e-22 109.0 208 37.5
Actinidia22616 Actinidia chinensis HOM05D006157 ORTHO05D007826 1.3e-21 107.8 172 41.3
arahy.Tifrunner.gnm1.ann1.HUL940 Arachis hypogaea HOM05D006157 ORTHO05D007826 3.7e-21 106.3 211 37.9
arahy.Tifrunner.gnm1.ann1.R9H0NA Arachis hypogaea HOM05D006157 ORTHO05D007826 3.7e-21 106.3 211 37.9
PSO675G5393 Papaver somniferum HOM05D006157 ORTHO05D007826 1.3e-18 97.8 249 31.7
CSS0005922 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 3.7e-13 79.7 144 36.8
ATR0100G006 Amborella trichopoda HOM05D006157 ORTHO05D007826 1.2e-11 74.7 182 30.2
ATR0100G061 Amborella trichopoda HOM05D006157 ORTHO05D007826 2.0e-11 73.9 182 31.3
Zm00001eb315050 Zea mays HOM05D006157 ORTHO05D007826 2.0e-11 73.9 235 26.4
unitig_22.g6773 Utricularia gibba HOM05D006157 ORTHO05D007826 2.9e-10 70.1 194 32.5
FvH4_2g34701 Fragaria vesca HOM05D006157 ORTHO05D007826 2.7e-08 63.5 119 37.8
HPP92_027520 Vanilla planifolia HOM05D006157 ORTHO05D007826 4.7e-08 62.8 147 30.6
Os09g0460100 Oryza sativa ssp. japonica HOM05D006157 ORTHO05D007826 4.4e-06 56.2 224 24.1
Zm00001eb100900 Zea mays HOM05D006157 ORTHO05D007826 5.7e-06 55.8 56 46.4


User provided reference genes

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