Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.005G102100 Gossypium raimondii HOM05D001221 ORTHO05D047588 6.2e-38 160.2 77 100.0
Gohir.D07G119001 Gossypium hirsutum HOM05D001221 ORTHO05D047588 1.8e-29 132.1 66 95.5
Gohir.D12G231500 Gossypium hirsutum HOM05D001221 ORTHO05D006671 7.2e-18 93.6 47 95.7
Gorai.008G247800 Gossypium raimondii HOM05D001221 ORTHO05D006671 7.2e-18 93.6 47 95.7
Gohir.A12G230400 Gossypium hirsutum HOM05D001221 ORTHO05D006671 1.2e-17 92.8 57 84.2
Gohir.D13G142300 Gossypium hirsutum HOM05D001221 ORTHO05D006671 2.7e-17 91.7 46 95.7
COL.COLO4_34488 Corchorus olitorius HOM05D001221 ORTHO05D006671 2.3e-16 88.6 47 87.2
Gohir.D10G056050 Gossypium hirsutum HOM05D001221 ORTHO05D006671 1.9e-15 85.5 47 91.5
Duzib205G0255 Durio zibethinus HOM05D001221 ORTHO05D006671 7.4e-15 83.6 47 80.9
Thecc.03G281300 Theobroma cacao HOM05D001221 ORTHO05D006671 7.4e-15 83.6 47 78.7
Gohir.A03G017600 Gossypium hirsutum HOM05D001221 ORTHO05D006671 1.3e-14 82.8 47 76.6
CiPaw.11G133600 Carya illinoinensis HOM05D001221 ORTHO05D006671 1.6e-14 82.4 47 83.0
Duzib068G0932 Durio zibethinus HOM05D001221 ORTHO05D006671 1.6e-14 82.4 47 78.7
Cfa012211 Carpinus fangiana HOM05D001221 ORTHO05D006671 2.8e-14 81.6 47 80.9
CANSAT21G0250 Cannabis sativa HOM05D001221 ORTHO05D006671 3.7e-14 81.3 47 78.7
Eucgr.E00629 Eucalyptus grandis HOM05D001221 ORTHO05D006671 4.8e-14 80.9 47 76.6
Gohir.D03G150432 Gossypium hirsutum HOM05D001221 ORTHO05D006671 4.8e-14 80.9 47 74.5
Gorai.003G157600 Gossypium raimondii HOM05D001221 ORTHO05D006671 4.8e-14 80.9 47 74.5
FvH4_5g02710 Fragaria vesca HOM05D001221 ORTHO05D006671 1.1e-13 79.7 47 76.6
FAN18G1676 Fragaria x ananassa HOM05D001221 ORTHO05D006671 1.1e-13 79.7 47 76.6
FAN18G3923 Fragaria x ananassa HOM05D001221 ORTHO05D006671 1.1e-13 79.7 47 76.6
MD06G1086200 Malus domestica HOM05D001221 ORTHO05D006671 1.1e-13 79.7 47 74.5
MD14G1107400 Malus domestica HOM05D001221 ORTHO05D006671 1.1e-13 79.7 47 74.5
Potri.003G129300 Populus trichocarpa HOM05D001221 ORTHO05D006671 1.8e-13 79.0 47 78.7
Sed0000398 Sechium edule HOM05D001221 ORTHO05D006671 1.8e-13 79.0 47 78.7
CSS0031672 Camellia sinensis var. sinensis HOM05D001221 ORTHO05D006671 2.4e-13 78.6 47 74.5
Ciclev10020033m.g Citrus clementina HOM05D001221 ORTHO05D006671 3.1e-13 78.2 47 76.6
FAN04G0472 Fragaria x ananassa HOM05D001221 ORTHO05D006671 3.1e-13 78.2 47 74.5
FAN08G0663 Fragaria x ananassa HOM05D001221 ORTHO05D006671 3.1e-13 78.2 47 74.5
Lalb_Chr09g0332921 Lupinus albus HOM05D001221 ORTHO05D006671 3.1e-13 78.2 44 75.0
Nn6g33391 Nelumbo nucifera HOM05D001221 ORTHO05D006671 3.1e-13 78.2 47 74.5
RcHm_v2.0_Chr7g0197241 Rosa chinensis HOM05D001221 ORTHO05D006671 3.1e-13 78.2 47 74.5
QL12p032573 Quercus lobata HOM05D001221 ORTHO05D006671 4.1e-13 77.8 46 78.3
Sabra01G0077400 Salix brachista HOM05D001221 ORTHO05D006671 6.9e-13 77.0 47 78.7
ClCG01G002590 Citrullus lanatus HOM05D001221 ORTHO05D006671 9.1e-13 76.6 47 76.6
DCAR_008375 Daucus carota HOM05D001221 ORTHO05D006671 9.1e-13 76.6 47 74.5
TAR629G2779 Trochodendron aralioides HOM05D001221 ORTHO05D006671 9.1e-13 76.6 47 74.5
Cc08_g14890 Coffea canephora HOM05D001221 ORTHO05D006671 1.2e-12 76.3 47 76.6
FAN13G2860 Fragaria x ananassa HOM05D001221 ORTHO05D006671 1.2e-12 76.3 45 75.6
Sabra03G0091900 Salix brachista HOM05D001221 ORTHO05D006671 1.5e-12 75.9 46 76.1
Manes.02G020701 Manihot esculenta HOM05D001221 ORTHO05D006671 2.0e-12 75.5 47 70.2
Lsat_1_v5_gn_6_5540 Lactuca sativa HOM05D001221 ORTHO05D006671 2.6e-12 75.1 47 72.3
Atru.chr9.2167 Acer truncatum HOM05D001221 ORTHO05D006671 3.4e-12 74.7 43 76.7
TWI60G1420 Tripterygium wilfordii HOM05D001221 ORTHO05D006671 3.4e-12 74.7 47 74.5
PGR042G0854 Punica granatum HOM05D001221 ORTHO05D006671 4.5e-12 74.3 47 72.3
Glyma.05G209000 Glycine max HOM05D001221 ORTHO05D006671 5.9e-12 73.9 47 70.2
Glyma.08G015700 Glycine max HOM05D001221 ORTHO05D006671 5.9e-12 73.9 47 70.2
Lalb_Chr16g0390061 Lupinus albus HOM05D001221 ORTHO05D006671 5.9e-12 73.9 45 66.7
AUR62010699 Chenopodium quinoa HOM05D001221 ORTHO05D006671 7.7e-12 73.6 47 70.2
DCAR_004622 Daucus carota HOM05D001221 ORTHO05D006671 7.7e-12 73.6 47 72.3
Lsat_1_v5_gn_6_86460 Lactuca sativa HOM05D001221 ORTHO05D006671 7.7e-12 73.6 47 70.2
AUR62017186 Chenopodium quinoa HOM05D001221 ORTHO05D006671 1.0e-11 73.2 47 70.2
HanXRQChr13g0416331 Helianthus annuus HOM05D001221 ORTHO05D006671 1.3e-11 72.8 44 70.5
Lj4g0007712 Lotus japonicus HOM05D001221 ORTHO05D006671 1.3e-11 72.8 44 70.5
Phvul.002G290800 Phaseolus vulgaris HOM05D001221 ORTHO05D006671 1.3e-11 72.8 47 68.1
VMungo0251G3060 Vigna mungo HOM05D001221 ORTHO05D006671 1.3e-11 72.8 47 68.1
Peaxi162Scf00119g00136 Petunia axillaris HOM05D001221 ORTHO05D006671 2.2e-11 72.0 47 72.3
HanXRQChr03g0086851 Helianthus annuus HOM05D001221 ORTHO05D006671 5.0e-11 70.9 47 66.0
SHI07159 Sapria himalayana HOM05D001221 ORTHO05D006671 5.0e-11 70.9 42 71.4
ECA233G4771 Erigeron canadensis HOM05D001221 ORTHO05D006671 6.5e-11 70.5 47 68.1
HanXRQChr17g0533191 Helianthus annuus HOM05D001221 ORTHO05D006671 6.5e-11 70.5 43 72.1
Nitab4.5_0001615g0010 Nicotiana tabacum HOM05D001221 ORTHO05D006671 6.5e-11 70.5 47 70.2
Nitab4.5_0002975g0030 Nicotiana tabacum HOM05D001221 ORTHO05D006671 6.5e-11 70.5 47 70.2
Medtr8g098485 Medicago truncatula HOM05D001221 ORTHO05D006671 1.1e-10 69.7 44 68.2
Solyc08g081230.1 Solanum lycopersicum HOM05D001221 ORTHO05D006671 1.1e-10 69.7 47 70.2
PGSC0003DMG400012201 Solanum tuberosum HOM05D001221 ORTHO05D006671 1.1e-10 69.7 47 70.2
TPR.G12879 Trifolium pratense HOM05D001221 ORTHO05D006671 1.1e-10 69.7 44 68.2
Ca_17519_v3 Cicer arietinum L. HOM05D001221 ORTHO05D006671 1.4e-10 69.3 44 65.9
Hma1.2p1_1123F.1_g259480 Hydrangea macrophylla HOM05D001221 ORTHO05D006671 1.4e-10 69.3 47 66.0
Potri.001G102300 Populus trichocarpa HOM05D001221 ORTHO05D006671 1.4e-10 69.3 45 71.1
MELO3C005687.2 Cucumis melo HOM05D001221 ORTHO05D006671 1.9e-10 68.9 46 67.4
CsaV3_5G002700 Cucumis sativus L. HOM05D001221 ORTHO05D006671 1.9e-10 68.9 46 67.4
MBI18_g02845_MAGBIO Magnolia biondii HOM05D001221 ORTHO05D006671 1.9e-10 68.9 44 68.2
CAN.G774.58 Capsicum annuum HOM05D001221 ORTHO05D006671 2.5e-10 68.6 80 47.5
Sopen08g029540 Solanum pennellii HOM05D001221 ORTHO05D006671 2.5e-10 68.6 47 68.1
TAR374G1287 Trochodendron aralioides HOM05D001221 ORTHO05D006671 2.5e-10 68.6 47 66.0
Ah.05g180400 Amaranthus hybridus HOM05D001221 ORTHO05D006671 3.2e-10 68.2 47 66.0
ECA246G3866 Erigeron canadensis HOM05D001221 ORTHO05D006671 3.2e-10 68.2 44 65.9
Lsat_1_v5_gn_3_6400 Lactuca sativa HOM05D001221 ORTHO05D006671 3.2e-10 68.2 47 66.0
PGSC0003DMG400005822 Solanum tuberosum HOM05D001221 ORTHO05D006671 3.2e-10 68.2 47 66.0
Actinidia14572 Actinidia chinensis HOM05D001221 ORTHO05D006671 4.2e-10 67.8 39 76.9
PSO478G1078 Papaver somniferum HOM05D001221 ORTHO05D006671 4.2e-10 67.8 47 63.8
PSO782G4433 Papaver somniferum HOM05D001221 ORTHO05D006671 4.2e-10 67.8 47 63.8
Sopen08g003940 Solanum pennellii HOM05D001221 ORTHO05D006671 4.2e-10 67.8 47 66.0
SGA_v2.0_scaffold144G35934 Striga asiatica HOM05D001221 ORTHO05D006671 5.5e-10 67.4 39 74.4
MSTRG.25621 Avicennia marina HOM05D001221 ORTHO05D006671 7.2e-10 67.0 44 72.7
Peaxi162Scf00102g00163 Petunia axillaris HOM05D001221 ORTHO05D006671 7.2e-10 67.0 47 66.0
TAR375G0548 Trochodendron aralioides HOM05D001221 ORTHO05D006671 7.2e-10 67.0 47 61.7
Haze_08799 Corylus avellana HOM05D001221 ORTHO05D006671 9.4e-10 66.6 37 83.8
Migut.E01082 Erythranthe guttata HOM05D001221 ORTHO05D006671 9.4e-10 66.6 47 68.1
Oeu011041.1 Olea europaea HOM05D001221 ORTHO05D006671 9.4e-10 66.6 39 74.4
MBI17_g35257_MAGBIO Magnolia biondii HOM05D001221 ORTHO05D006671 1.2e-09 66.2 42 66.7
CAN.G792.76 Capsicum annuum HOM05D001221 ORTHO05D006671 1.6e-09 65.9 47 63.8
SalBow1G2669 Salvia bowleyana HOM05D001221 ORTHO05D006671 1.6e-09 65.9 40 72.5
Solyc08g008070.1 Solanum lycopersicum HOM05D001221 ORTHO05D006671 1.6e-09 65.9 47 63.8
Aqoxy7G00283 Aquilegia oxysepala HOM05D001221 ORTHO05D006671 2.1e-09 65.5 47 59.6
Gohir.D10G105350 Gossypium hirsutum HOM05D001221 ORTHO05D217181 2.1e-09 65.5 31 93.5
Psat7g032360 Pisum sativum HOM05D001221 ORTHO05D006671 2.1e-09 65.5 44 63.6
Rhsim02G0232900 Rhododendron simsii HOM05D001221 ORTHO05D006671 2.1e-09 65.5 42 71.4
RhsimUnG0159800 Rhododendron simsii HOM05D001221 ORTHO05D006671 2.1e-09 65.5 42 71.4
ECA240G1733 Erigeron canadensis HOM05D001221 ORTHO05D006671 3.6e-09 64.7 42 61.9
EL10Ac5g12792 Beta vulgaris HOM05D001221 ORTHO05D006671 6.1e-09 63.9 43 62.8
Dinv37627 Davidia involucrata HOM05D001221 ORTHO05D006671 1.0e-08 63.2 38 76.3
Dinv38928 Davidia involucrata HOM05D001221 ORTHO05D006671 1.0e-08 63.2 41 70.7
AT5G41330 Arabidopsis thaliana HOM05D001221 ORTHO05D006671 1.8e-08 62.4 45 60.0
Actinidia01996 Actinidia chinensis HOM05D001221 ORTHO05D006671 2.3e-08 62.0 37 78.4
ATR0680G154 Amborella trichopoda HOM05D001221 ORTHO05D006671 3.0e-08 61.6 46 58.7
AL7G48110 Arabidopsis lyrata HOM05D001221 ORTHO05D006671 5.1e-08 60.8 45 60.0
CARHR212990 Cardamine hirsuta HOM05D001221 ORTHO05D006671 6.7e-08 60.5 45 57.8
PGR031G0524 Punica granatum HOM05D001221 ORTHO05D006671 6.7e-08 60.5 42 69.0
Sp7g00610 Schrenkiella parvula HOM05D001221 ORTHO05D006671 6.7e-08 60.5 45 57.8
SpUn0010_0090 Schrenkiella parvula HOM05D001221 ORTHO05D006671 6.7e-08 60.5 45 57.8
CDE06G2128 Ceratophyllum demersum HOM05D001221 ORTHO05D006671 4.4e-07 57.8 39 56.4
Carub.0007s3416 Capsella rubella HOM05D001221 ORTHO05D006671 5.7e-07 57.4 45 55.6
Thhalv10027773m.g Eutrema salsugineum HOM05D001221 ORTHO05D006671 5.7e-07 57.4 45 55.6
THA.LOC104809381 Tarenaya hassleriana HOM05D001221 ORTHO05D006671 9.7e-07 56.6 44 52.3
Aa31LG9G600 Aethionema arabicum HOM05D001221 ORTHO05D006671 1.3e-06 56.2 46 56.5
Lsat_1_v5_gn_4_91161 Lactuca sativa HOM05D000643 ORTHO05D000663 1.3e-06 56.2 37 67.6


User provided reference genes

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