Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.005G095900 Gossypium raimondii HOM05D003823 ORTHO05D218813 4.5e-52 207.6 102 100.0
Gorai.007G237600 Gossypium raimondii HOM05D003823 ORTHO05D004866 1.6e-28 129.4 121 59.5
Gohir.D02G085100 Gossypium hirsutum HOM05D003823 ORTHO05D004866 1.9e-26 122.5 121 57.0
Rhsim08G0068000 Rhododendron simsii HOM05D003823 ORTHO05D004866 3.6e-17 91.7 48 85.4
Aqoxy3G03322 Aquilegia oxysepala HOM05D003823 ORTHO05D004866 4.7e-17 91.3 44 95.5
Duzib084G0821 Durio zibethinus HOM05D003823 ORTHO05D004866 4.7e-17 91.3 44 95.5
Gohir.A11G029891 Gossypium hirsutum HOM05D003823 ORTHO05D004866 4.7e-17 91.3 44 95.5
Gohir.D11G033300 Gossypium hirsutum HOM05D003823 ORTHO05D004866 4.7e-17 91.3 44 95.5
Gorai.007G036100 Gossypium raimondii HOM05D003823 ORTHO05D004866 4.7e-17 91.3 44 95.5
Oeu006179.1 Olea europaea HOM05D003823 ORTHO05D004866 4.7e-17 91.3 44 95.5
Thecc.03G082400 Theobroma cacao HOM05D003823 ORTHO05D004866 4.7e-17 91.3 44 95.5
AL5G27100 Arabidopsis lyrata HOM05D003823 ORTHO05D004866 6.1e-17 90.9 44 93.2
AT3G47810 Arabidopsis thaliana HOM05D003823 ORTHO05D004866 6.1e-17 90.9 44 93.2
BcaB01g00874 Brassica carinata HOM05D003823 ORTHO05D004866 6.1e-17 90.9 44 93.2
BcaB02g10689 Brassica carinata HOM05D003823 ORTHO05D004866 6.1e-17 90.9 44 93.2
BcaC01g01774 Brassica carinata HOM05D003823 ORTHO05D004866 6.1e-17 90.9 44 93.2
BcaC01g02292 Brassica carinata HOM05D003823 ORTHO05D004866 6.1e-17 90.9 44 93.2
A06p19840 Brassica napus HOM05D003823 ORTHO05D004866 6.1e-17 90.9 44 93.2
A06p27290 Brassica napus HOM05D003823 ORTHO05D004866 6.1e-17 90.9 44 93.2
C03p66970 Brassica napus HOM05D003823 ORTHO05D004866 6.1e-17 90.9 44 93.2
C03p72020 Brassica napus HOM05D003823 ORTHO05D004866 6.1e-17 90.9 44 93.2
BolC3t18970H Brassica oleracea HOM05D003823 ORTHO05D004866 6.1e-17 90.9 44 93.2
BolC3t19499H Brassica oleracea HOM05D003823 ORTHO05D004866 6.1e-17 90.9 44 93.2
BraA06t25064Z Brassica rapa HOM05D003823 ORTHO05D004866 6.1e-17 90.9 44 93.2
BraA06t25670Z Brassica rapa HOM05D003823 ORTHO05D004866 6.1e-17 90.9 44 93.2
CARHR156490 Cardamine hirsuta HOM05D003823 ORTHO05D004866 6.1e-17 90.9 44 93.2
Thhalv10010746m.g Eutrema salsugineum HOM05D003823 ORTHO05D004866 6.1e-17 90.9 44 93.2
Sp5g14150 Schrenkiella parvula HOM05D003823 ORTHO05D004866 6.1e-17 90.9 44 93.2
COL.COLO4_22965 Corchorus olitorius HOM05D003823 ORTHO05D004866 8.0e-17 90.5 44 93.2
Gohir.D06G082500 Gossypium hirsutum HOM05D003823 ORTHO05D017994 8.0e-17 90.5 44 95.5
Manes.05G098825 Manihot esculenta HOM05D003823 ORTHO05D004866 8.0e-17 90.5 44 93.2
Aa31LG4G16460 Aethionema arabicum HOM05D003823 ORTHO05D004866 1.4e-16 89.7 44 90.9
Carub.0005s1392 Capsella rubella HOM05D003823 ORTHO05D004866 1.4e-16 89.7 44 90.9
Oeu022626.1 Olea europaea HOM05D003823 ORTHO05D004866 1.4e-16 89.7 44 90.9
Rhsim08G0157700 Rhododendron simsii HOM05D003823 ORTHO05D004866 1.8e-16 89.4 44 93.2
GSVIVG01020043001 Vitis vinifera HOM05D003823 ORTHO05D004866 1.8e-16 89.4 44 93.2
CSS0004961 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 2.3e-16 89.0 45 88.9
Nn4g23085 Nelumbo nucifera HOM05D003823 ORTHO05D004866 2.3e-16 89.0 47 87.2
Nn8g40950 Nelumbo nucifera HOM05D003823 ORTHO05D004866 2.3e-16 89.0 47 87.2
THA.LOC104819434 Tarenaya hassleriana HOM05D003823 ORTHO05D004866 2.3e-16 89.0 44 90.9
THA.LOC104821437 Tarenaya hassleriana HOM05D003823 ORTHO05D004866 2.3e-16 89.0 44 90.9
HPP92_020326 Vanilla planifolia HOM05D003823 ORTHO05D004866 2.3e-16 89.0 53 81.1
Actinidia02709 Actinidia chinensis HOM05D003823 ORTHO05D004866 3.0e-16 88.6 44 90.9
CSS0031561 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 3.0e-16 88.6 44 90.9
CSS0031728 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 3.0e-16 88.6 44 90.9
CSS0041610 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 3.0e-16 88.6 44 90.9
CSS0049183 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 3.0e-16 88.6 44 90.9
CAN.G1305.7 Capsicum annuum HOM05D003823 ORTHO05D004866 3.0e-16 88.6 44 95.5
Duzib251G0021 Durio zibethinus HOM05D003823 ORTHO05D004866 3.0e-16 88.6 44 90.9
Duzib268G0082 Durio zibethinus HOM05D003823 ORTHO05D004866 3.0e-16 88.6 44 90.9
Gohir.A12G166100 Gossypium hirsutum HOM05D003823 ORTHO05D004866 3.0e-16 88.6 44 90.9
Gohir.D12G169500 Gossypium hirsutum HOM05D003823 ORTHO05D004866 3.0e-16 88.6 44 90.9
Gorai.008G182100 Gossypium raimondii HOM05D003823 ORTHO05D004866 3.0e-16 88.6 44 90.9
Solyc03g113020.3 Solanum lycopersicum HOM05D003823 ORTHO05D004866 3.0e-16 88.6 44 95.5
Sopen03g032100 Solanum pennellii HOM05D003823 ORTHO05D004866 3.0e-16 88.6 44 95.5
PGSC0003DMG400018144 Solanum tuberosum HOM05D003823 ORTHO05D004866 3.0e-16 88.6 44 95.5
vmacro18202 Vaccinium macrocarpon HOM05D003823 ORTHO05D004866 3.0e-16 88.6 44 90.9
Lj5A113G71 Lonicera japonica HOM05D003823 ORTHO05D004866 4.0e-16 88.2 44 93.2
Lalb_Chr25g0280071 Lupinus albus HOM05D003823 ORTHO05D004866 4.0e-16 88.2 44 93.2
Manes.14G076100 Manihot esculenta HOM05D003823 ORTHO05D004866 4.0e-16 88.2 44 93.2
Nitab4.5_0000785g0070 Nicotiana tabacum HOM05D003823 ORTHO05D004866 4.0e-16 88.2 44 93.2
Nitab4.5_0010010g0030 Nicotiana tabacum HOM05D003823 ORTHO05D004866 4.0e-16 88.2 44 93.2
Peaxi162Scf00009g00217 Petunia axillaris HOM05D003823 ORTHO05D004866 4.0e-16 88.2 44 93.2
Thecc.02G351700 Theobroma cacao HOM05D003823 ORTHO05D004866 4.0e-16 88.2 44 88.6
TAR622G1107 Trochodendron aralioides HOM05D003823 ORTHO05D004866 4.0e-16 88.2 44 93.2
Atru.chr9.2289 Acer truncatum HOM05D003823 ORTHO05D004866 5.2e-16 87.8 44 90.9
Ciclev10022411m.g Citrus clementina HOM05D003823 ORTHO05D004866 5.2e-16 87.8 44 90.9
Gorai.003G098000 Gossypium raimondii HOM05D003823 ORTHO05D017994 5.2e-16 87.8 44 93.2
Medtr3g080480 Medicago truncatula HOM05D003823 ORTHO05D004866 5.2e-16 87.8 44 90.9
Os02g0265400 Oryza sativa ssp. japonica HOM05D003823 ORTHO05D004866 5.2e-16 87.8 44 90.9
Atru.chr11.1839 Acer truncatum HOM05D003823 ORTHO05D004866 6.8e-16 87.4 44 93.2
Atru.chr4.927 Acer truncatum HOM05D003823 ORTHO05D004866 8.9e-16 87.0 44 90.9
PSO017G2864 Papaver somniferum HOM05D003823 ORTHO05D004866 8.9e-16 87.0 44 90.9
PSO478G3470 Papaver somniferum HOM05D003823 ORTHO05D004866 8.9e-16 87.0 44 90.9
Cpa.g.sc388.5 Carica papaya HOM05D003823 ORTHO05D004866 1.2e-15 86.7 44 93.2
Migut.D02333 Erythranthe guttata HOM05D003823 ORTHO05D004866 1.2e-15 86.7 44 93.2
Gorai.005G191600 Gossypium raimondii HOM05D003823 ORTHO05D004866 1.2e-15 86.7 44 90.9
SalBow6G5762 Salvia bowleyana HOM05D003823 ORTHO05D004866 1.2e-15 86.7 44 93.2
Ca_06062_v3 Cicer arietinum L. HOM05D003823 ORTHO05D004866 1.5e-15 86.3 44 90.9
Ca_30714_v3 Cicer arietinum L. HOM05D003823 ORTHO05D004866 1.5e-15 86.3 44 90.9
ClCG06G016300 Citrullus lanatus HOM05D003823 ORTHO05D004866 1.5e-15 86.3 44 90.9
Cc04_g17180 Coffea canephora HOM05D003823 ORTHO05D004866 1.5e-15 86.3 44 90.9
MELO3C017163.2 Cucumis melo HOM05D003823 ORTHO05D004866 1.5e-15 86.3 44 90.9
CsaV3_1G002230 Cucumis sativus L. HOM05D003823 ORTHO05D004866 1.5e-15 86.3 44 90.9
DCAR_026066 Daucus carota HOM05D003823 ORTHO05D004866 1.5e-15 86.3 44 90.9
Dinv38684 Davidia involucrata HOM05D003823 ORTHO05D004866 1.5e-15 86.3 44 90.9
FvH4_5g15250 Fragaria vesca HOM05D003823 ORTHO05D004866 1.5e-15 86.3 44 90.9
FAN04G0558 Fragaria x ananassa HOM05D003823 ORTHO05D004866 1.5e-15 86.3 44 90.9
FAN08G0194 Fragaria x ananassa HOM05D003823 ORTHO05D004866 1.5e-15 86.3 44 90.9
FAN13G2005 Fragaria x ananassa HOM05D003823 ORTHO05D004866 1.5e-15 86.3 44 90.9
FAN18G4237 Fragaria x ananassa HOM05D003823 ORTHO05D004866 1.5e-15 86.3 44 90.9
Glyma.02G268600 Glycine max HOM05D003823 ORTHO05D004866 1.5e-15 86.3 44 90.9
Glyma.14G048800 Glycine max HOM05D003823 ORTHO05D004866 1.5e-15 86.3 44 90.9
Gohir.A05G198301 Gossypium hirsutum HOM05D003823 ORTHO05D004866 1.5e-15 86.3 44 90.9
Gohir.A08G078101 Gossypium hirsutum HOM05D003823 ORTHO05D004866 1.5e-15 86.3 44 90.9
Gohir.D03G122233 Gossypium hirsutum HOM05D003823 ORTHO05D004866 1.5e-15 86.3 44 90.9
Lj4g0027914 Lotus japonicus HOM05D003823 ORTHO05D004866 1.5e-15 86.3 44 90.9
MBI02_g36598_MAGBIO Magnolia biondii HOM05D003823 ORTHO05D004866 1.5e-15 86.3 44 90.9
MD06G1190100 Malus domestica HOM05D003823 ORTHO05D004866 1.5e-15 86.3 44 90.9
MD14G1197000 Malus domestica HOM05D003823 ORTHO05D004866 1.5e-15 86.3 44 90.9
Prupe.5G189200 Prunus persica HOM05D003823 ORTHO05D004866 1.5e-15 86.3 44 90.9
PGR083G1126 Punica granatum HOM05D003823 ORTHO05D004866 1.5e-15 86.3 44 90.9
RcHm_v2.0_Chr7g0180841 Rosa chinensis HOM05D003823 ORTHO05D004866 1.5e-15 86.3 44 90.9
Sed0017565 Sechium edule HOM05D003823 ORTHO05D004866 1.5e-15 86.3 44 90.9
TAR374G1522 Trochodendron aralioides HOM05D003823 ORTHO05D004866 1.5e-15 86.3 44 90.9
Zm00001eb203950 Zea mays HOM05D003823 ORTHO05D004866 1.5e-15 86.3 44 90.9
CANSAT80G0583 Cannabis sativa HOM05D003823 ORTHO05D004866 2.0e-15 85.9 44 88.6
Cfa018968 Carpinus fangiana HOM05D000046 ORTHO05D004866 2.0e-15 85.9 44 88.6
CiPaw.11G041500 Carya illinoinensis HOM05D003823 ORTHO05D004866 2.0e-15 85.9 44 88.6
AUR62027457 Chenopodium quinoa HOM05D003823 ORTHO05D004866 2.0e-15 85.9 44 90.9
AUR62031242 Chenopodium quinoa HOM05D003823 ORTHO05D004866 2.0e-15 85.9 44 90.9
Haze_07352 Corylus avellana HOM05D003823 ORTHO05D004866 2.0e-15 85.9 44 88.6
Eucgr.K02462 Eucalyptus grandis HOM05D003823 ORTHO05D004866 2.0e-15 85.9 44 88.6
Phvul.008G213700 Phaseolus vulgaris HOM05D003823 ORTHO05D004866 2.0e-15 85.9 44 88.6
TPR.G29042 Trifolium pratense HOM05D003823 ORTHO05D004866 2.0e-15 85.9 44 88.6
TWI60G1055 Tripterygium wilfordii HOM05D003823 ORTHO05D004866 2.0e-15 85.9 44 88.6
TWI81G0804 Tripterygium wilfordii HOM05D003823 ORTHO05D004866 2.0e-15 85.9 44 88.6
VMungo0647G1166 Vigna mungo HOM05D003823 ORTHO05D004866 2.0e-15 85.9 44 88.6
CDE02G3183 Ceratophyllum demersum HOM05D003823 ORTHO05D004866 2.6e-15 85.5 44 88.6
CBR_g29439 Chara braunii HOM05D003823 ORTHO05D004866 2.6e-15 85.5 44 88.6
Dinv06526 Davidia involucrata HOM05D003823 ORTHO05D004866 2.6e-15 85.5 44 88.6
Gorai.013G138400 Gossypium raimondii HOM05D003823 ORTHO05D004866 2.6e-15 85.5 44 90.9
HanXRQChr02g0056361 Helianthus annuus HOM05D003823 ORTHO05D004866 2.6e-15 85.5 44 88.6
HanXRQChr14g0449901 Helianthus annuus HOM05D003823 ORTHO05D004866 2.6e-15 85.5 44 88.6
Lsat_1_v5_gn_2_88881 Lactuca sativa HOM05D003823 ORTHO05D004866 2.6e-15 85.5 44 88.6
Lj4A501G12 Lonicera japonica HOM05D003823 ORTHO05D004866 2.6e-15 85.5 44 88.6
Lj4A511G17 Lonicera japonica HOM05D003823 ORTHO05D004866 2.6e-15 85.5 44 88.6
Hund02662 Selenicereus undatus HOM05D003823 ORTHO05D004866 2.6e-15 85.5 44 88.6
Ca_16285_v3 Cicer arietinum L. HOM05D003823 ORTHO05D004866 3.4e-15 85.1 44 86.4
CSS0033378 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 4.4e-15 84.7 44 88.6
Dinv19933 Davidia involucrata HOM05D003823 ORTHO05D004866 4.4e-15 84.7 44 88.6
ECA238G0538 Erigeron canadensis HOM05D003823 ORTHO05D004866 4.4e-15 84.7 44 86.4
Gohir.D06G139701 Gossypium hirsutum HOM05D003823 ORTHO05D017994 4.4e-15 84.7 44 90.9
Medtr5g085380 Medicago truncatula HOM05D003823 ORTHO05D004866 4.4e-15 84.7 44 86.4
Psat2g025840 Pisum sativum HOM05D003823 ORTHO05D004866 4.4e-15 84.7 44 86.4
TPR.G25673 Trifolium pratense HOM05D003823 ORTHO05D004866 4.4e-15 84.7 44 86.4
MSTRG.9636 Avicennia marina HOM05D003823 ORTHO05D004866 5.8e-15 84.3 44 88.6
Gorai.008G100600 Gossypium raimondii HOM05D003823 ORTHO05D004866 7.5e-15 84.0 44 90.9
QL10p016165 Quercus lobata HOM05D003823 ORTHO05D004866 7.5e-15 84.0 44 88.6
Psat5g111480 Pisum sativum HOM05D003823 ORTHO05D004866 9.8e-15 83.6 44 86.4
Actinidia37644 Actinidia chinensis HOM05D003823 ORTHO05D004866 1.3e-14 83.2 44 88.6
Cc07_g03190 Coffea canephora HOM05D003823 ORTHO05D004866 1.7e-14 82.8 44 84.1
Potri.011G077900 Populus trichocarpa HOM05D003823 ORTHO05D004866 1.7e-14 82.8 44 90.9
Zm00001eb237810 Zea mays HOM05D003823 ORTHO05D004866 1.7e-14 82.8 44 86.4
Ciclev10032832m.g Citrus clementina HOM05D003823 ORTHO05D004866 2.2e-14 82.4 44 86.4
Potri.001G354000 Populus trichocarpa HOM05D003823 ORTHO05D004866 2.2e-14 82.4 44 88.6
Sabra16G0232900 Salix brachista HOM05D003823 ORTHO05D004866 2.2e-14 82.4 44 88.6
SMO116G0153 Selaginella moellendorffii HOM05D003823 ORTHO05D004866 2.2e-14 82.4 44 86.4
EL10Ac8g19266 Beta vulgaris HOM05D003823 ORTHO05D004866 2.9e-14 82.0 44 84.1
CSS0019545 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 2.9e-14 82.0 44 84.1
SGA_v2.0_scaffold193G40709 Striga asiatica HOM05D003823 ORTHO05D004866 2.9e-14 82.0 44 86.4
Migut.D02334 Erythranthe guttata HOM05D003823 ORTHO05D004866 3.7e-14 81.6 44 88.6
Sc12g0006240 Simmondsia chinensis HOM05D003823 ORTHO05D004866 3.7e-14 81.6 44 84.1
Pp3c11_12990 Physcomitrium patens HOM05D003823 ORTHO05D004866 4.9e-14 81.3 44 86.4
MCO13G641 Micromonas commoda HOM05D003823 ORTHO05D004866 8.3e-14 80.5 44 75.0
ATR0564G299 Amborella trichopoda HOM05D003823 ORTHO05D004866 1.1e-13 80.1 44 86.4
Mapoly0081s0078 Marchantia polymorpha HOM05D003823 ORTHO05D004866 1.4e-13 79.7 44 81.8
Sed0002791 Sechium edule HOM05D003823 ORTHO05D004866 1.8e-13 79.3 44 84.1
Duzib248G1489 Durio zibethinus HOM05D003823 ORTHO05D186086 2.7e-12 75.5 44 79.5
Cre12.g499900 Chlamydomonas reinhardtii HOM05D003823 ORTHO05D004866 9.5e-10 67.0 44 68.2
Gohir.A06G032676 Gossypium hirsutum HOM05D000367 ORTHO05D002159 2.8e-09 65.5 31 96.8
Gorai.010G036800 Gossypium raimondii HOM05D000367 ORTHO05D002159 2.8e-09 65.5 31 96.8
Pp3c7_13070 Physcomitrium patens HOM05D003823 ORTHO05D004866 1.1e-08 63.5 44 72.7
Gohir.D06G033400 Gossypium hirsutum HOM05D000367 ORTHO05D002159 1.4e-08 63.2 31 93.5
Actinidia17538 Actinidia chinensis HOM05D003823 ORTHO05D004866 3.1e-08 62.0 30 90.0
Duzib093G1106 Durio zibethinus HOM05D000367 ORTHO05D002159 2.0e-07 59.3 31 87.1
Thecc.08G065600 Theobroma cacao HOM05D000367 ORTHO05D002159 2.0e-07 59.3 31 87.1
Duzib116G0323 Durio zibethinus HOM05D000367 ORTHO05D002159 2.6e-07 58.9 31 83.9
COL.COLO4_11969 Corchorus olitorius HOM05D000367 ORTHO05D002159 3.4e-07 58.5 31 83.9
QL09p016816 Quercus lobata HOM05D000367 ORTHO05D002159 1.3e-06 56.6 37 67.6
Cpa.g.sc198.40 Carica papaya HOM05D000367 ORTHO05D002159 2.9e-06 55.5 32 71.9
Atru.chr13.1066 Acer truncatum HOM05D000367 ORTHO05D002159 6.4e-06 54.3 31 74.2
Atru.chr13.1072 Acer truncatum HOM05D000367 ORTHO05D002159 6.4e-06 54.3 31 74.2
CsaV3_2G030000 Cucumis sativus L. HOM05D000367 ORTHO05D002159 8.3e-06 53.9 31 74.2


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