Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.005G092800 Gossypium raimondii HOM05D000158 ORTHO05D000197 8.0e-155 550.4 287 100.0
Gorai.003G159900 Gossypium raimondii HOM05D000158 ORTHO05D000197 2.4e-66 256.5 365 46.6
Gorai.003G060700 Gossypium raimondii HOM05D000158 ORTHO05D000197 8.5e-56 221.5 129 88.4
Gorai.010G125800 Gossypium raimondii HOM05D000158 ORTHO05D000197 5.5e-55 218.8 130 87.7
Gorai.005G169400 Gossypium raimondii HOM05D000158 ORTHO05D000197 1.6e-54 217.2 293 47.1
Gorai.012G096500 Gossypium raimondii HOM05D000158 ORTHO05D000197 6.1e-54 215.3 130 86.2
Gorai.001G213500 Gossypium raimondii HOM05D000158 ORTHO05D000197 6.7e-53 211.8 130 85.4
Gorai.006G078200 Gossypium raimondii HOM05D000158 ORTHO05D000197 3.3e-52 209.5 130 85.4
Gorai.001G115800 Gossypium raimondii HOM05D000158 ORTHO05D000197 2.2e-51 206.8 323 42.4
Gorai.013G139500 Gossypium raimondii HOM05D000158 ORTHO05D000197 5.3e-50 202.2 130 82.3
Gorai.004G161500 Gossypium raimondii HOM05D000158 ORTHO05D000197 1.5e-49 200.7 273 46.9
Gorai.010G157800 Gossypium raimondii HOM05D000158 ORTHO05D000197 2.3e-37 160.2 175 54.9
Gorai.004G224200 Gossypium raimondii HOM05D000158 ORTHO05D000197 2.8e-35 153.3 130 67.7
Gorai.001G087300 Gossypium raimondii HOM05D000158 ORTHO05D000197 2.6e-28 130.2 91 74.7
Gorai.003G148400 Gossypium raimondii HOM05D000158 ORTHO05D000197 3.9e-16 89.7 67 68.7
Gorai.007G206500 Gossypium raimondii HOM05D000158 ORTHO05D000197 1.2e-14 84.7 97 55.7
Gorai.013G130000 Gossypium raimondii HOM05D000158 ORTHO05D001651 8.0e-14 82.0 56 85.7
Gorai.013G197300 Gossypium raimondii HOM05D000158 ORTHO05D001651 1.8e-13 80.9 55 81.8
Gorai.004G080800 Gossypium raimondii HOM05D000158 ORTHO05D001651 2.3e-13 80.5 56 83.9
Gorai.011G123900 Gossypium raimondii HOM05D000158 ORTHO05D000197 1.5e-12 77.8 56 80.4
CiPaw.04G053800 Carya illinoinensis HOM05D000158 ORTHO05D000197 2.6e-12 77.0 87 42.5
Gorai.003G115200 Gossypium raimondii HOM05D000158 ORTHO05D001651 2.6e-12 77.0 56 82.1
Gorai.008G047900 Gossypium raimondii HOM05D000158 ORTHO05D001651 7.5e-12 75.5 54 79.6
Gorai.011G206800 Gossypium raimondii HOM05D000158 ORTHO05D001651 6.4e-11 72.4 56 80.4
Gorai.002G201400 Gossypium raimondii HOM05D000158 ORTHO05D001651 8.3e-11 72.0 56 80.4
Gorai.004G105300 Gossypium raimondii HOM05D000158 ORTHO05D001651 2.4e-10 70.5 56 78.6
Gorai.003G148300 Gossypium raimondii HOM05D000158 ORTHO05D001651 5.4e-10 69.3 49 87.8
Gorai.006G078300 Gossypium raimondii HOM05D000158 ORTHO05D001651 5.4e-10 69.3 56 76.8
Gorai.003G092000 Gossypium raimondii HOM05D000158 ORTHO05D001651 2.0e-09 67.4 56 71.4
Gorai.010G126200 Gossypium raimondii HOM05D000158 ORTHO05D001651 2.0e-09 67.4 56 76.8
MSTRG.28188 Avicennia marina HOM05D000158 ORTHO05D000197 1.3e-08 64.7 97 38.1
Manes.09G089621 Manihot esculenta HOM05D000158 ORTHO05D000002 1.3e-08 64.7 87 41.4
Migut.L00684 Erythranthe guttata HOM05D000158 ORTHO05D000197 1.7e-08 64.3 89 38.2
Gorai.008G070700 Gossypium raimondii HOM05D000158 ORTHO05D001651 8.6e-08 62.0 56 73.2
arahy.Tifrunner.gnm1.ann1.W4W5Q5 Arachis hypogaea HOM05D000158 ORTHO05D000197 9.5e-07 58.5 235 23.0
Glyma.14G146500 Glycine max HOM05D000158 ORTHO05D000197 9.5e-07 58.5 121 30.6
Glyma.14G146600 Glycine max HOM05D000158 ORTHO05D000197 9.5e-07 58.5 121 30.6
Glyma.18G122400 Glycine max HOM05D000158 ORTHO05D000197 2.1e-06 57.4 121 29.8
QL12p030312 Quercus lobata HOM05D000158 ORTHO05D000197 2.1e-06 57.4 90 31.1
Glyma.07G166100 Glycine max HOM05D000158 ORTHO05D000197 2.8e-06 57.0 121 31.4
Glyma.14G141100 Glycine max HOM05D000158 ORTHO05D000197 4.7e-06 56.2 121 30.6
Glyma.15G177300 Glycine max HOM05D000158 ORTHO05D000197 4.7e-06 56.2 121 30.6
Glyma.18G122300 Glycine max HOM05D000158 ORTHO05D000197 4.7e-06 56.2 121 30.6
Glyma.19G068000 Glycine max HOM05D000158 ORTHO05D000197 4.7e-06 56.2 121 30.6
Glyma.19G100300 Glycine max HOM05D000158 ORTHO05D000197 4.7e-06 56.2 121 30.6
Glyma.20G059900 Glycine max HOM05D000158 ORTHO05D000197 6.2e-06 55.8 120 30.8
TPR.G289 Trifolium pratense HOM05D000158 ORTHO05D000197 6.2e-06 55.8 94 35.1
TPR.G3175 Trifolium pratense HOM05D000158 ORTHO05D000197 6.2e-06 55.8 94 36.2
TPR.G7440 Trifolium pratense HOM05D000158 ORTHO05D000197 6.2e-06 55.8 94 36.2
MELO3C013543.2 Cucumis melo HOM05D000158 ORTHO05D000197 8.0e-06 55.5 85 36.5
TPR.G32580 Trifolium pratense HOM05D000158 ORTHO05D003614 8.0e-06 55.5 93 33.3


User provided reference genes

Program Settings