Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 1.7e-51 205.7 101 100.0
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 7.9e-49 196.8 104 95.2
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 8.1e-46 186.8 104 89.4
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 1.4e-45 186.0 104 92.3
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.0e-43 179.9 104 89.4
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 1.3e-43 179.5 104 87.5
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 6.5e-43 177.2 104 85.6
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 6.5e-43 177.2 104 86.5
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 1.4e-42 176.0 102 86.3
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 1.6e-41 172.6 102 85.3
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 2.7e-41 171.8 102 83.3
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 1.8e-40 169.1 102 84.3
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 2.3e-40 168.7 97 85.6
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 3.0e-40 168.3 105 81.0
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 3.0e-40 168.3 106 81.1
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 6.7e-40 167.2 102 83.3
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 3.3e-39 164.9 100 84.0
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 1.6e-38 162.5 100 83.0
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 1.6e-38 162.5 103 79.6
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 2.1e-38 162.2 103 79.6
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 2.1e-38 162.2 103 80.6
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 2.1e-38 162.2 103 79.6
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 2.1e-38 162.2 103 79.6
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 3.1e-37 158.3 103 78.6
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 2.0e-36 155.6 105 76.2
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 2.0e-36 155.6 100 78.0
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 4.5e-36 154.5 106 75.5
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 4.5e-36 154.5 102 73.5
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 5.9e-36 154.1 105 77.1
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 1.3e-35 152.9 102 76.5
Ciclev10002911m.g Citrus clementina HOM05D006768 ORTHO05D008436 2.2e-35 152.1 110 75.5
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 2.9e-35 151.8 97 81.4
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 5.0e-35 151.0 105 75.2
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 6.5e-35 150.6 103 78.6
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 8.4e-35 150.2 102 75.5
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 8.4e-35 150.2 104 76.0
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 1.1e-34 149.8 108 73.1
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 1.1e-34 149.8 97 77.3
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 2.5e-34 148.7 97 78.4
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 3.2e-34 148.3 104 72.1
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 5.5e-34 147.5 102 74.5
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 5.5e-34 147.5 103 73.8
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 1.2e-33 146.4 101 76.2
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 1.2e-33 146.4 101 76.2
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 1.2e-33 146.4 101 76.2
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 1.6e-33 146.0 95 78.9
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 2.1e-33 145.6 102 73.5
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 2.1e-33 145.6 99 74.7
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 2.1e-33 145.6 99 74.7
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 2.7e-33 145.2 115 71.3
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 6.1e-33 144.1 101 73.3
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 6.1e-33 144.1 101 75.2
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 3.0e-32 141.7 104 73.1
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 5.1e-32 141.0 93 78.5
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 6.7e-32 140.6 99 74.7
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 6.7e-32 140.6 101 71.3
TWI12G0503 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 8.7e-32 140.2 104 69.2
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 8.7e-32 140.2 105 71.4
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 1.1e-31 139.8 106 70.8
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 1.9e-31 139.0 101 73.3
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 2.5e-31 138.7 104 72.1
Psat2g079320 Pisum sativum HOM05D006768 ORTHO05D008436 9.7e-31 136.7 105 69.5
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 1.3e-30 136.3 96 75.0
QL09p036660 Quercus lobata HOM05D006768 ORTHO05D008436 2.2e-30 135.6 106 67.9
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 2.8e-30 135.2 86 81.4
arahy.Tifrunner.gnm1.ann1.BFT67J Arachis hypogaea HOM05D006768 ORTHO05D008436 6.3e-30 134.0 111 63.1
arahy.Tifrunner.gnm1.ann1.V4QE5E Arachis hypogaea HOM05D006768 ORTHO05D008436 6.3e-30 134.0 111 63.1
CANSAT25G0473 Cannabis sativa HOM05D006768 ORTHO05D008436 8.2e-30 133.7 114 64.0
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 1.1e-29 133.3 99 71.7
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 2.4e-29 132.1 112 66.1
SGA_v2.0_scaffold24G10479 Striga asiatica HOM05D006768 ORTHO05D008436 3.1e-29 131.7 102 64.7
CDE04G1345 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 9.0e-29 130.2 103 63.1
Glyma.14G163200 Glycine max HOM05D006768 ORTHO05D008436 9.0e-29 130.2 110 65.5
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 9.0e-29 130.2 102 69.6
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 9.0e-29 130.2 102 69.6
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 9.0e-29 130.2 94 71.3
Thhalv10029535m.g Eutrema salsugineum HOM05D006768 ORTHO05D008436 1.5e-28 129.4 105 66.7
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 2.6e-28 128.6 104 67.3
Haze_00489 Corylus avellana HOM05D006768 ORTHO05D008436 7.7e-28 127.1 83 78.3
Glyma.13G082200 Glycine max HOM05D006768 ORTHO05D008436 7.7e-28 127.1 110 62.7
Lalb_Chr04g0253331 Lupinus albus HOM05D006768 ORTHO05D008436 7.7e-28 127.1 112 63.4
THA.LOC104817125 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 7.7e-28 127.1 108 66.7
Phvul.008G165800 Phaseolus vulgaris HOM05D006768 ORTHO05D008436 1.3e-27 126.3 112 61.6
CARHR259330 Cardamine hirsuta HOM05D006768 ORTHO05D008436 2.9e-27 125.2 111 63.1
Sp6g09840 Schrenkiella parvula HOM05D006768 ORTHO05D008436 1.1e-26 123.2 114 63.2
BcaC01g04777 Brassica carinata HOM05D006768 ORTHO05D008436 1.4e-26 122.9 112 63.4
BolC3t15699H Brassica oleracea HOM05D006768 ORTHO05D008436 1.4e-26 122.9 112 63.4
CDE08G1444 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 1.4e-26 122.9 107 61.7
BraA03t12013Z Brassica rapa HOM05D006768 ORTHO05D008436 1.9e-26 122.5 113 62.8
TPR.G8510 Trifolium pratense HOM05D006768 ORTHO05D008436 4.2e-26 121.3 108 60.2
Lj1g0025240 Lotus japonicus HOM05D006768 ORTHO05D008436 5.5e-26 120.9 115 59.1
HPP92_011177 Vanilla planifolia HOM05D006768 ORTHO05D008436 2.1e-25 119.0 103 63.1
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 2.7e-25 118.6 88 70.5
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 2.7e-25 118.6 92 69.6
Medtr5g059100 Medicago truncatula HOM05D006768 ORTHO05D008436 4.6e-25 117.9 106 64.2
Carub.0006s2676 Capsella rubella HOM05D006768 ORTHO05D008436 7.9e-25 117.1 113 59.3
Zm00001eb398080 Zea mays HOM05D006768 ORTHO05D008436 6.7e-24 114.0 111 52.3
A03p28000 Brassica napus HOM05D006768 ORTHO05D008436 8.8e-24 113.6 106 62.3
C03p33820 Brassica napus HOM05D006768 ORTHO05D008436 8.8e-24 113.6 106 62.3
AT4G08230 Arabidopsis thaliana HOM05D006768 ORTHO05D008436 1.1e-23 113.2 113 57.5
VMungo0647G1658 Vigna mungo HOM05D006768 ORTHO05D008436 1.1e-23 113.2 106 61.3
Os03g0263700 Oryza sativa ssp. japonica HOM05D006768 ORTHO05D008436 2.0e-23 112.5 108 58.3
THA.LOC104806813 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 2.0e-23 112.5 108 59.3
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 5.7e-23 110.9 89 68.5
AL6G41870 Arabidopsis lyrata HOM05D006768 ORTHO05D008436 7.4e-23 110.5 112 59.8
Zm00001eb011610 Zea mays HOM05D006768 ORTHO05D008436 9.7e-23 110.2 110 52.7
SEGI_37020 Sequoiadendron giganteum HOM05D006768 ORTHO05D008436 3.7e-22 108.2 100 54.0
CSS0018251 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 3.1e-21 105.1 86 66.3
FAN27G1871 Fragaria x ananassa HOM05D000048 ORTHO05D004674 2.5e-18 95.5 78 69.2
Peaxi162Scf00000g61010 Petunia axillaris HOM05D006768 ORTHO05D008436 3.2e-18 95.1 65 76.9
Nitab4.5_0001142g0120 Nicotiana tabacum HOM05D006768 ORTHO05D008436 5.5e-18 94.4 92 58.7
Aa31LG9G14330 Aethionema arabicum HOM05D006768 ORTHO05D008436 2.2e-14 82.4 86 57.0
AUR62023633 Chenopodium quinoa HOM05D006768 ORTHO05D008436 3.7e-14 81.6 68 67.6
Sabra05G0131600 Salix brachista HOM05D006768 ORTHO05D008436 1.8e-13 79.3 58 75.9
Pp3c13_12030 Physcomitrium patens HOM05D006768 ORTHO05D008436 1.2e-12 76.6 106 48.1
Mapoly0043s0020 Marchantia polymorpha HOM05D006768 ORTHO05D008436 3.5e-12 75.1 114 43.0
Ca_28007_v3 Cicer arietinum L. HOM05D006768 ORTHO05D008436 1.7e-11 72.8 81 58.0
AagrBONN_evm.TU.Sc2ySwM_344.1603 Anthoceros agrestis HOM05D006768 ORTHO05D008436 4.2e-10 68.2 108 38.9
SMO308G0024 Selaginella moellendorffii HOM05D006768 ORTHO05D008436 8.8e-08 60.5 103 39.8
DCAR_014111 Daucus carota HOM05D006768 ORTHO05D008436 5.7e-07 57.8 58 58.6
Nn1g08704 Nelumbo nucifera HOM05D006768 ORTHO05D008436 5.7e-07 57.8 53 64.2


User provided reference genes

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